Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 3.0e-24 114.4 58 100.0
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 5.2e-21 103.6 52 98.1
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 1.2e-20 102.4 58 89.7
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 2.0e-20 101.7 58 84.5
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 3.4e-20 100.9 58 84.5
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 3.4e-20 100.9 58 84.5
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 4.4e-20 100.5 58 84.5
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 9.8e-20 99.4 55 87.3
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 1.7e-19 98.6 58 81.0
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 3.7e-19 97.4 58 79.3
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 3.7e-19 97.4 58 79.3
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 3.7e-19 97.4 58 79.3
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 3.7e-19 97.4 58 82.8
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 1.1e-18 95.9 58 79.3
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 2.4e-18 94.7 58 75.9
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 2.4e-18 94.7 57 80.7
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 4.1e-18 94.0 52 84.6
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 4.1e-18 94.0 59 78.0
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 5.4e-18 93.6 54 79.6
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 9.2e-18 92.8 52 84.6
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 1.2e-17 92.4 52 80.8
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 1.2e-17 92.4 53 79.2
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.6e-17 92.0 52 80.8
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 1.6e-17 92.0 52 80.8
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 1.6e-17 92.0 52 80.8
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 2.0e-17 91.7 52 80.8
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 2.7e-17 91.3 52 78.8
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 3.5e-17 90.9 52 80.8
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 3.5e-17 90.9 52 78.8
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 3.5e-17 90.9 59 74.6
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 4.6e-17 90.5 52 78.8
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 4.6e-17 90.5 52 80.8
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 6.0e-17 90.1 58 74.1
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 6.0e-17 90.1 52 80.8
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 6.0e-17 90.1 52 80.8
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 6.0e-17 90.1 52 80.8
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 7.8e-17 89.7 58 74.1
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 1.0e-16 89.4 52 78.8
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 1.3e-16 89.0 58 72.4
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 1.3e-16 89.0 58 75.9
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 1.7e-16 88.6 52 78.8
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 6.6e-16 86.7 52 75.0
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 6.6e-16 86.7 53 81.1
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 8.6e-16 86.3 52 76.9
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 1.1e-15 85.9 55 74.5
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.5e-15 85.5 52 75.0
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 1.9e-15 85.1 60 66.7
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 2.5e-15 84.7 53 73.6
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 3.3e-15 84.3 52 73.1
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 3.3e-15 84.3 52 76.9
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 4.3e-15 84.0 59 76.3
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 4.3e-15 84.0 58 67.2
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 5.6e-15 83.6 52 71.2
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 5.6e-15 83.6 49 75.5
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 7.3e-15 83.2 47 83.0
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 7.3e-15 83.2 53 71.7
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 7.3e-15 83.2 58 69.0
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 9.5e-15 82.8 52 73.1
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 1.6e-14 82.0 56 66.1
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 2.8e-14 81.3 61 72.1
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 3.6e-14 80.9 53 71.7
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 4.7e-14 80.5 57 71.9
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 1.8e-13 78.6 47 74.5
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 1.8e-13 78.6 46 76.1
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 1.8e-13 78.6 47 74.5
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 1.8e-13 78.6 52 73.1
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 3.1e-13 77.8 53 71.7
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 4.0e-13 77.4 47 70.2
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 5.2e-13 77.0 45 73.3
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 5.2e-13 77.0 53 71.7
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 6.8e-13 76.6 44 79.5
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 6.8e-13 76.6 44 79.5
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 6.8e-13 76.6 44 79.5
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 6.8e-13 76.6 58 65.5
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 8.9e-13 76.3 48 68.8
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 8.9e-13 76.3 45 73.3
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 1.5e-12 75.5 58 65.5
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 2.6e-12 74.7 51 74.5
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 2.6e-12 74.7 51 74.5
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 7.5e-12 73.2 54 66.7
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 3.7e-11 70.9 48 72.9
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 6.4e-11 70.1 45 71.1
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 2.4e-10 68.2 54 61.1
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 9.2e-10 66.2 47 61.7
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 6.0e-09 63.5 38 81.6
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 6.6e-08 60.1 31 87.1
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 1.1e-07 59.3 46 58.7
FAN04G1285 Fragaria x ananassa HOM05D007712 ORTHO05D009755 2.5e-07 58.2 31 83.9
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 9.5e-07 56.2 57 49.1


User provided reference genes

Program Settings