Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 6.3e-238 827.0 410 100.0
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 7.0e-221 770.4 410 94.1
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 9.1e-221 770.0 410 94.1
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 2.9e-142 509.2 404 62.6
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 9.4e-141 504.2 404 63.4
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.3e-138 495.7 399 61.7
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 9.7e-138 494.2 403 60.8
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 6.3e-137 491.5 416 58.9
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 1.2e-135 487.3 403 60.3
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.0e-134 484.2 403 61.8
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 2.9e-134 482.6 403 60.0
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 1.9e-133 479.9 401 59.1
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 2.7e-132 476.1 406 60.6
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 4.7e-132 475.3 404 60.1
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 4.7e-132 475.3 401 60.1
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.0e-131 474.2 401 58.6
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.4e-131 473.8 399 60.4
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.8e-131 473.4 404 60.1
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.3e-131 473.0 403 58.3
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.0e-131 472.6 403 58.6
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 3.0e-131 472.6 399 60.2
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 5.1e-131 471.9 403 58.6
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 2.0e-130 469.9 405 59.3
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 2.0e-130 469.9 399 60.2
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 3.3e-130 469.2 405 58.3
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 4.4e-130 468.8 403 58.8
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 4.4e-130 468.8 398 59.5
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 7.4e-130 468.0 405 58.3
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 9.7e-130 467.6 405 58.0
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.3e-129 467.2 403 57.8
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 2.8e-129 466.1 402 58.2
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 3.7e-129 465.7 401 57.4
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 4.8e-129 465.3 398 60.6
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 1.1e-128 464.2 401 58.4
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 5.3e-128 461.8 402 57.7
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 7.0e-128 461.5 414 57.7
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 1.5e-127 460.3 405 55.6
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 2.0e-127 459.9 406 57.6
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 3.5e-127 459.1 402 56.5
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 5.9e-127 458.4 402 56.7
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 1.0e-126 457.6 403 56.3
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.0e-126 457.6 402 57.7
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 1.7e-126 456.8 399 57.4
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 2.2e-126 456.4 404 57.9
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 3.8e-126 455.7 403 57.1
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.1e-125 454.1 403 57.8
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.1e-125 454.1 399 56.6
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.9e-125 453.4 403 57.6
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.9e-125 453.4 402 56.7
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 3.2e-125 452.6 405 57.0
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 3.2e-125 452.6 402 56.5
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 5.5e-125 451.8 416 54.3
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 5.5e-125 451.8 404 57.2
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 1.2e-124 450.7 404 57.4
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.2e-124 450.7 400 57.5
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 2.1e-124 449.9 404 57.4
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 3.6e-124 449.1 401 57.6
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 3.6e-124 449.1 404 54.2
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 3.0e-123 446.0 404 57.2
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 8.8e-123 444.5 405 54.8
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 3.3e-122 442.6 401 54.6
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 3.3e-122 442.6 401 58.1
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 2.8e-121 439.5 401 56.6
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 4.8e-121 438.7 401 54.1
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 9.1e-120 434.5 400 55.5
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.2e-119 434.1 398 56.3
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 2.0e-119 433.3 386 56.7
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 2.0e-119 433.3 386 56.7
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.5e-117 427.2 404 54.2
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 3.0e-115 419.5 403 54.1
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 2.0e-114 416.8 403 54.3
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 3.4e-114 416.0 401 54.1
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 7.5e-114 414.8 402 53.5
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.7e-113 413.7 404 51.5
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 4.8e-113 412.1 404 53.7
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 6.3e-113 411.8 391 54.5
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 8.3e-113 411.4 400 54.2
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 8.3e-113 411.4 402 53.5
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 2.4e-112 409.8 414 52.7
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 3.1e-112 409.5 404 53.5
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 3.1e-112 409.5 404 53.5
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 4.1e-112 409.1 407 52.1
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.2e-111 407.5 404 53.7
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 5.9e-111 405.2 404 53.2
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.2e-110 403.3 349 55.6
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.2e-110 403.3 415 51.8
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 3.6e-108 396.0 399 51.4
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 4.7e-108 395.6 404 52.5
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.9e-105 385.6 278 67.6
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 4.1e-104 382.5 370 52.7
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 1.3e-102 377.5 378 52.4
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 5.2e-99 365.5 318 59.4
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 9.5e-93 344.7 405 46.9
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 2.6e-90 336.7 363 48.8
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 9.8e-90 334.7 369 50.4
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 1.2e-84 317.8 402 41.0
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.3e-83 313.5 279 59.5
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 1.2e-82 311.2 246 61.4
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 2.3e-78 297.0 387 43.9
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.1e-77 294.7 279 55.2
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 3.3e-77 293.1 390 41.5
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 4.4e-74 282.7 407 38.8
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 5.1e-70 269.2 189 67.2
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 1.4e-64 251.1 193 62.2
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.6e-61 238.4 247 52.2
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.4e-56 222.6 202 58.9
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.2e-55 221.5 162 64.2
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.1e-48 198.4 160 61.9
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 1.2e-47 194.9 194 52.1
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.8e-46 191.0 233 45.5
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 2.5e-45 187.2 200 52.0
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.5e-42 176.4 137 64.2
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 7.6e-42 175.6 153 58.2
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 2.1e-39 167.5 153 58.2
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 2.7e-39 167.2 110 72.7
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 3.3e-37 160.2 240 40.0
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 9.6e-37 158.7 455 29.9
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 3.1e-35 153.7 169 47.3
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 3.1e-35 153.7 356 29.5
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 5.3e-35 152.9 165 50.3
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 6.5e-33 146.0 368 31.5
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 2.1e-31 141.0 93 73.1
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 1.3e-28 131.7 149 49.0
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.1e-27 127.1 100 60.0
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 7.2e-24 115.9 93 66.7
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 1.6e-23 114.8 433 26.3
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.5e-21 108.2 199 36.7
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 8.2e-20 102.4 85 55.3
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 1.8e-19 101.3 223 33.2
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 5.7e-13 79.7 67 58.2
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 9.1e-11 72.4 87 41.4
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 3.2e-08 63.9 90 45.6


User provided reference genes

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