Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 3.5e-186 654.8 330 100.0
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.5e-136 490.0 332 78.3
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.6e-109 399.4 330 60.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.9e-108 396.0 330 59.7
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 2.4e-107 392.9 330 59.7
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 5.4e-107 391.7 330 59.7
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.5e-104 383.6 333 58.6
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.8e-103 378.6 333 57.4
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.8e-103 378.6 333 57.4
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 4.5e-101 372.1 330 56.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 5.5e-99 365.2 330 54.8
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 9.3e-99 364.4 330 54.5
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 3.5e-98 362.5 330 55.5
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 4.6e-98 362.1 327 54.7
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.0e-97 360.9 330 55.5
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 3.9e-97 359.0 341 54.0
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 1.1e-96 357.5 333 54.4
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.1e-96 357.5 333 53.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.5e-96 357.1 332 55.1
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.5e-96 356.3 332 56.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 2.5e-96 356.3 328 55.5
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 3.3e-96 355.9 336 54.5
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 4.3e-96 355.5 333 53.5
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.4e-96 354.8 330 56.4
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 9.6e-96 354.4 331 54.1
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.3e-95 354.0 331 55.0
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 2.8e-95 352.8 330 54.2
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 3.7e-95 352.4 330 55.2
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 3.7e-95 352.4 330 54.8
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 6.2e-95 351.7 330 53.6
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.1e-94 350.9 330 54.5
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.8e-94 350.1 330 53.0
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 2.4e-94 349.7 328 55.2
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.4e-94 349.7 333 55.0
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 4.0e-94 349.0 320 55.6
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 4.0e-94 349.0 327 53.8
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 5.3e-94 348.6 335 52.8
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 9.0e-94 347.8 330 52.7
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.5e-93 347.1 329 54.4
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.6e-93 346.3 330 52.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 3.4e-93 345.9 333 54.4
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.3e-92 344.0 329 52.9
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.7e-92 343.6 335 53.4
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.7e-92 343.6 333 53.2
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.7e-92 343.6 330 53.6
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 2.2e-92 343.2 330 52.7
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.1e-91 340.9 330 52.7
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.9e-91 340.1 327 53.2
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 4.2e-91 339.0 301 56.8
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 4.2e-91 339.0 332 51.8
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.2e-90 337.4 330 50.0
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 6.1e-90 335.1 330 50.0
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.1e-90 335.1 338 53.3
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 6.1e-90 335.1 330 52.4
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.8e-89 333.6 338 53.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.1e-88 330.9 331 51.7
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.1e-88 330.9 331 52.6
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 3.3e-88 329.3 330 50.9
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 7.4e-88 328.2 328 49.4
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 6.3e-87 325.1 330 49.7
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 1.1e-86 324.3 297 56.2
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.4e-86 323.9 333 49.8
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.8e-86 323.6 327 52.0
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 1.8e-86 323.6 329 51.7
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.4e-86 323.2 329 52.3
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.1e-86 322.4 345 48.1
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 5.3e-86 322.0 326 51.5
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.9e-86 321.6 338 51.2
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 9.0e-86 321.2 331 50.2
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.5e-85 320.5 330 50.3
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 1.3e-84 317.4 326 51.2
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 3.8e-84 315.8 334 51.5
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 8.5e-84 314.7 331 52.0
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 3.2e-83 312.8 330 49.1
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.2e-82 310.8 291 54.6
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 6.1e-82 308.5 335 48.7
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 1.8e-81 307.0 303 53.5
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.1e-80 304.3 330 49.7
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.3e-79 300.8 333 46.8
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 2.8e-79 299.7 334 48.5
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 2.6e-77 293.1 335 47.2
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.5e-75 286.6 316 48.4
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.2e-75 285.8 333 48.9
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 9.4e-75 284.6 368 44.6
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 9.4e-75 284.6 324 46.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.7e-74 283.1 271 55.0
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 2.3e-73 280.0 332 46.7
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 5.1e-73 278.9 329 45.0
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.5e-72 277.3 331 46.5
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.5e-72 277.3 331 46.5
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 2.6e-72 276.6 339 46.6
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 7.4e-72 275.0 335 48.1
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 1.3e-71 274.2 329 45.6
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.1e-70 271.2 347 45.8
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 3.1e-70 269.6 330 43.9
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 2.5e-67 260.0 339 42.2
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.2e-66 257.7 269 52.8
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.6e-66 257.3 217 60.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.7e-66 256.5 333 44.4
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 4.7e-66 255.8 336 42.9
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 5.9e-61 238.8 332 41.3
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 4.7e-58 229.2 383 35.8
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.1e-54 218.0 380 34.2
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.8e-54 217.2 249 47.0
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.9e-52 209.9 184 58.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.7e-39 167.5 154 57.1
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 1.8e-38 164.1 139 55.4
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.9e-36 156.4 133 60.9
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.3e-35 153.3 328 31.7
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 3.1e-33 146.7 195 42.6
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 1.9e-30 137.5 128 55.5
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.9e-30 137.5 133 51.1
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 4.1e-30 136.3 117 56.4
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 2.5e-27 127.1 128 53.9
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 8.1e-26 122.1 123 52.8
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.6e-21 107.8 87 56.3
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.7e-20 104.4 93 53.8
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 6.6e-20 102.4 147 44.2
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.1e-17 93.6 123 44.7
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.1e-14 82.4 87 52.9
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.6e-13 81.3 105 42.9
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 8.1e-10 68.9 53 52.8
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.5e-08 64.7 117 40.2
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.0e-08 64.3 63 49.2
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 4.9e-07 59.7 55 58.2


User provided reference genes

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