Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 5.6e-115 417.5 199 100.0
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 3.2e-94 348.6 199 87.4
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 1.4e-81 306.6 194 72.7
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 1.7e-79 299.7 194 71.1
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.7e-79 299.7 194 71.1
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 2.2e-79 299.3 199 70.4
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 2.2e-79 299.3 192 72.4
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 2.9e-79 298.9 200 69.5
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.9e-79 298.9 199 69.8
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.8e-79 298.5 194 70.1
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 2.5e-78 295.8 197 72.1
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 7.1e-78 294.3 194 69.1
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 2.7e-77 292.4 199 67.8
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 4.6e-77 291.6 200 68.0
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 4.6e-77 291.6 199 69.3
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 6.0e-77 291.2 199 69.8
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 1.0e-76 290.4 200 68.0
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 1.3e-76 290.0 199 68.3
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 1.8e-76 289.7 195 66.2
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 2.3e-76 289.3 194 68.0
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 3.0e-76 288.9 195 69.2
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 3.9e-76 288.5 194 68.6
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 3.3e-75 285.4 195 65.6
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 3.3e-75 285.4 199 67.8
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.3e-75 285.4 212 64.6
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 4.3e-75 285.0 201 67.7
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 7.4e-75 284.3 194 66.5
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 9.6e-75 283.9 192 67.7
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 2.8e-74 282.3 200 67.5
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.8e-74 282.3 191 70.2
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.8e-74 282.3 191 70.2
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 8.2e-74 280.8 194 65.5
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 3.1e-73 278.9 200 67.0
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 3.1e-73 278.9 200 67.0
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 3.1e-73 278.9 200 64.0
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 4.1e-73 278.5 196 65.8
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 6.9e-73 277.7 194 68.0
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 2.0e-72 276.2 198 66.2
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 3.4e-72 275.4 193 63.7
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 7.6e-72 274.2 192 65.6
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 7.6e-72 274.2 200 62.5
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.7e-71 273.1 194 63.4
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 2.2e-71 272.7 199 61.3
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 2.2e-71 272.7 199 61.3
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 3.8e-71 271.9 192 63.5
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 5.0e-71 271.6 192 65.6
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 5.0e-71 271.6 199 62.3
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 6.5e-71 271.2 199 62.3
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 1.1e-70 270.4 199 61.8
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.1e-70 270.4 194 66.0
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 1.4e-70 270.0 190 64.7
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.9e-70 269.6 194 64.4
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 1.9e-70 269.6 199 62.3
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 2.5e-70 269.2 193 63.7
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 1.2e-69 266.9 199 59.8
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 1.2e-69 266.9 197 63.5
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.6e-69 266.5 192 63.5
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 2.1e-69 266.2 199 61.8
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 2.7e-69 265.8 199 61.8
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 4.6e-69 265.0 194 62.9
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 6.1e-69 264.6 199 59.3
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 6.1e-69 264.6 191 62.3
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 7.9e-69 264.2 199 63.3
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 1.0e-68 263.8 180 68.3
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.3e-68 263.5 166 74.1
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 1.3e-68 263.5 175 69.7
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 8.7e-68 260.8 200 61.0
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.1e-67 260.4 199 62.3
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 2.5e-67 259.2 169 69.8
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 2.5e-67 259.2 194 61.9
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 3.3e-67 258.8 192 63.0
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 3.3e-67 258.8 195 60.5
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 4.3e-67 258.5 192 61.5
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 5.7e-67 258.1 193 62.7
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 7.4e-67 257.7 192 60.9
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 3.7e-66 255.4 175 67.4
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 6.3e-66 254.6 166 71.7
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 8.2e-66 254.2 199 60.3
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 8.2e-66 254.2 197 60.4
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 4.1e-65 251.9 194 58.2
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 5.3e-65 251.5 194 60.3
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 1.5e-64 250.0 197 58.9
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.4e-62 243.4 169 64.5
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.6e-61 240.0 161 68.3
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 3.6e-61 238.8 194 58.8
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 7.9e-61 237.7 195 55.9
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.3e-60 236.1 194 59.3
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 5.1e-60 235.0 165 63.6
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 5.7e-59 231.5 156 67.3
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.1e-57 227.3 166 65.1
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 5.3e-57 224.9 194 56.2
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 6.9e-57 224.6 167 61.7
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 7.7e-56 221.1 166 64.5
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 5.0e-55 218.4 197 52.8
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 2.7e-53 212.6 221 47.1
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 6.1e-53 211.5 195 49.2
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 3.0e-52 209.1 192 54.7
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 4.1e-49 198.7 194 45.4
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.9e-46 189.9 133 65.4
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.9e-46 189.9 133 65.4
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 6.1e-45 184.9 199 45.2
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 3.0e-44 182.6 194 50.5
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 1.2e-43 180.6 132 59.8
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 3.1e-41 172.6 173 49.7
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 2.1e-37 159.8 102 69.6
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 8.0e-37 157.9 221 39.4
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 7.5e-35 151.4 266 36.8
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.0e-31 141.0 92 70.7
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.6e-29 133.7 179 40.8
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 8.0e-29 131.3 111 55.0
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.2e-27 127.5 90 65.6
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 4.9e-26 122.1 80 70.0
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 6.1e-21 105.1 71 67.6
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 1.0e-20 104.4 104 48.1
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 7.0e-17 91.7 145 36.6
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 1.5e-14 84.0 228 29.4
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.4e-12 77.4 57 64.9
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 8.9e-12 74.7 56 58.9
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 5.8e-11 72.0 47 72.3
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.3e-10 70.9 61 57.4
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 3.7e-10 69.3 55 56.4
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 9.5e-06 54.7 152 27.0


User provided reference genes

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