Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 7.7e-81 303.9 170 100.0
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 2.0e-73 279.3 174 92.0
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 2.7e-33 146.0 171 55.0
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 5.6e-31 138.3 177 50.8
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 7.3e-31 137.9 181 54.7
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 9.5e-31 137.5 137 58.4
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.2e-30 137.1 137 57.7
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 1.6e-30 136.7 173 51.4
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 1.6e-30 136.7 143 60.1
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-30 136.0 137 57.7
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 4.7e-30 135.2 136 58.8
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 8.1e-30 134.4 153 59.5
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 1.1e-29 134.0 118 63.6
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 1.4e-29 133.7 154 61.0
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.4e-29 133.7 116 66.4
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 3.1e-29 132.5 114 65.8
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 6.8e-29 131.3 145 56.6
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 6.8e-29 131.3 157 56.1
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 6.8e-29 131.3 164 47.6
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 6.8e-29 131.3 116 63.8
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 8.9e-29 131.0 182 45.1
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 3.4e-28 129.0 179 48.0
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 4.4e-28 128.6 145 57.2
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 4.4e-28 128.6 143 60.8
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 4.4e-28 128.6 164 50.0
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 7.6e-28 127.9 162 58.6
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 7.6e-28 127.9 159 53.5
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 9.9e-28 127.5 114 71.9
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 9.9e-28 127.5 176 46.0
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 9.9e-28 127.5 115 64.3
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 9.9e-28 127.5 115 64.3
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 3.8e-27 125.6 114 61.4
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 8.4e-27 124.4 124 63.7
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.1e-26 124.0 114 60.5
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.1e-26 124.0 169 49.7
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 1.9e-26 123.2 137 53.3
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 2.4e-26 122.9 114 57.9
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 2.4e-26 122.9 99 66.7
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 2.4e-26 122.9 166 48.8
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 3.2e-26 122.5 154 51.9
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 3.2e-26 122.5 99 65.7
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 4.1e-26 122.1 125 55.2
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 5.4e-26 121.7 114 59.6
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 5.4e-26 121.7 120 64.2
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 7.1e-26 121.3 149 48.3
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 7.1e-26 121.3 134 52.2
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 7.1e-26 121.3 122 57.4
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 7.1e-26 121.3 115 60.0
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 7.1e-26 121.3 114 57.9
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 7.1e-26 121.3 133 49.6
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 9.2e-26 120.9 125 55.2
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 1.2e-25 120.6 125 54.4
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 1.2e-25 120.6 126 56.3
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.6e-25 120.2 170 45.3
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.6e-25 120.2 136 52.9
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 2.1e-25 119.8 134 51.5
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 2.1e-25 119.8 100 64.0
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 3.5e-25 119.0 160 55.0
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 4.6e-25 118.6 134 51.5
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 4.6e-25 118.6 134 51.5
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 4.6e-25 118.6 116 60.3
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 4.6e-25 118.6 114 58.8
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 6.0e-25 118.2 167 46.7
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 6.0e-25 118.2 135 51.1
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 7.8e-25 117.9 126 55.6
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.3e-24 117.1 134 53.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.3e-24 117.1 124 54.0
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 1.3e-24 117.1 157 50.3
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 2.3e-24 116.3 116 58.6
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 2.3e-24 116.3 124 53.2
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 3.0e-24 115.9 125 52.0
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 3.9e-24 115.5 126 69.0
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 5.1e-24 115.2 137 50.4
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 6.6e-24 114.8 128 57.8
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 8.6e-24 114.4 146 46.6
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 1.5e-23 113.6 122 52.5
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 9.6e-23 110.9 124 52.4
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 2.1e-22 109.8 114 58.8
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 2.8e-22 109.4 99 59.6
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 6.2e-22 108.2 177 45.8
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.1e-21 107.5 152 45.4
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 3.1e-21 105.9 120 64.2
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 3.1e-21 105.9 114 53.5
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 1.7e-19 100.1 100 54.0
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 4.9e-19 98.6 100 54.0
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 5.4e-18 95.1 99 50.5
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 1.4e-13 80.5 89 56.2
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 2.4e-13 79.7 124 46.0
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 4.0e-13 79.0 96 53.1
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 5.8e-12 75.1 52 75.0
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 1.3e-11 73.9 87 54.0
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 1.9e-10 70.1 51 72.5
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 5.4e-10 68.6 53 69.8
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 1.5e-07 60.5 58 51.7


User provided reference genes

Program Settings