Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 3.0e-193 678.3 345 100.0
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 3.9e-180 634.8 346 93.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 3.6e-146 521.9 346 78.6
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 1.0e-140 503.8 329 78.1
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 3.7e-138 495.4 345 74.2
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 5.8e-136 488.0 325 77.5
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.3e-135 486.9 344 73.3
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 1.7e-135 486.5 335 75.5
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 8.4e-135 484.2 343 71.7
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 3.2e-134 482.3 345 72.5
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 7.1e-134 481.1 325 76.6
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 7.1e-134 481.1 331 75.2
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 9.3e-134 480.7 328 75.3
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 4.6e-133 478.4 337 73.9
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 7.9e-133 477.6 328 75.9
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.8e-132 476.5 334 74.9
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.0e-132 475.7 334 74.9
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 8.7e-132 474.2 328 75.3
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.5e-131 472.6 325 75.7
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 5.7e-131 471.5 341 70.4
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 2.8e-130 469.2 337 73.0
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 4.1e-129 465.3 328 73.2
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.1e-129 465.3 348 70.1
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 4.1e-129 465.3 337 70.9
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 5.3e-129 464.9 328 71.3
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.3e-129 464.9 346 70.5
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 5.3e-129 464.9 326 73.0
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 5.3e-129 464.9 346 69.7
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.9e-129 464.5 348 70.1
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 5.9e-128 461.5 350 68.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 7.6e-128 461.1 326 72.7
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 2.2e-127 459.5 340 68.8
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 2.2e-127 459.5 328 71.3
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 2.2e-127 459.5 342 69.9
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.9e-127 459.1 339 71.1
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 5.0e-127 458.4 328 71.3
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 5.0e-127 458.4 325 72.3
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 6.5e-127 458.0 326 72.1
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.5e-127 457.6 348 69.5
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 8.5e-127 457.6 340 70.0
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.1e-126 457.2 342 69.0
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.1e-126 457.2 348 69.0
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.1e-126 457.2 325 72.3
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.4e-126 456.8 348 69.3
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 3.2e-126 455.7 340 70.9
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 4.2e-126 455.3 342 69.9
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 4.2e-126 455.3 340 69.4
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.2e-125 453.8 336 69.9
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.2e-125 453.8 343 70.3
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 2.7e-125 452.6 340 70.9
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 4.6e-125 451.8 327 72.8
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 6.1e-125 451.4 336 70.5
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 6.1e-125 451.4 326 70.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 7.9e-125 451.1 338 68.3
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.3e-124 450.3 335 68.7
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.3e-124 450.3 329 70.2
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.8e-124 449.9 335 68.7
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 6.7e-124 448.0 335 68.7
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.1e-123 447.2 338 67.5
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.9e-123 446.4 335 68.4
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.9e-123 446.4 335 69.0
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.5e-123 446.0 328 69.5
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 3.3e-123 445.7 326 69.3
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 9.7e-123 444.1 336 69.0
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 8.2e-122 441.0 327 70.3
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.1e-121 440.7 344 67.4
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.1e-121 440.7 317 70.7
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 3.1e-121 439.1 336 69.0
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 5.3e-121 438.3 336 69.6
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 1.2e-120 437.2 328 69.2
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.2e-120 437.2 338 68.3
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.0e-119 434.1 325 68.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 2.2e-119 433.0 316 71.5
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 4.2e-118 428.7 329 69.9
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 8.8e-116 421.0 327 67.3
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.5e-115 420.2 325 68.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 5.3e-113 411.8 325 66.2
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.5e-112 410.2 326 66.9
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 8.5e-111 404.4 333 64.9
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.9e-110 403.3 330 66.4
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.5e-110 402.9 281 73.0
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.5e-110 402.9 328 66.5
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 6.1e-109 398.3 285 72.6
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 7.2e-102 374.8 278 71.2
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 1.8e-100 370.2 390 55.1
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 4.0e-100 369.0 328 61.6
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 2.2e-98 363.2 324 61.7
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 8.2e-98 361.3 340 58.5
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 5.3e-97 358.6 357 57.7
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 3.5e-96 355.9 379 54.4
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.5e-94 349.7 357 55.2
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.0e-88 330.1 332 53.9
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 5.5e-86 322.0 340 53.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 3.6e-85 319.3 207 78.3
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 6.6e-79 298.5 325 50.5
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 8.6e-79 298.1 234 67.5
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 5.8e-67 258.8 296 48.6
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.1e-60 238.0 275 51.3
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 2.5e-54 216.9 364 39.0
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 2.4e-52 210.3 308 39.9
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 6.4e-50 202.2 196 61.2
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 8.1e-45 185.3 192 51.6
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.4e-44 184.5 164 58.5
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 2.3e-39 167.2 111 66.7
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.5e-38 163.7 104 79.8
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.4e-36 157.9 108 73.1
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.1e-20 105.1 237 33.3
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 6.9e-12 75.9 86 52.3
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 2.5e-09 67.4 50 60.0
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 3.6e-08 63.5 90 43.3
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 8.8e-07 58.9 51 56.9


User provided reference genes

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