Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 2.3e-236 822.0 471 100.0
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 2.8e-213 745.3 476 91.8
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.2e-136 490.7 483 66.3
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.0e-135 486.1 476 64.7
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.1e-132 477.6 486 60.5
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 4.1e-132 475.7 476 69.1
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.6e-131 473.8 488 59.6
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 2.7e-131 473.0 476 64.9
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.2e-130 469.9 474 63.9
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 2.5e-129 466.5 428 66.4
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 3.2e-129 466.1 478 67.2
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 3.6e-128 462.6 424 68.2
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 3.6e-128 462.6 415 70.1
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 8.0e-128 461.5 422 66.1
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 1.0e-127 461.1 423 65.5
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.3e-127 459.9 459 66.2
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.8e-127 458.4 426 66.4
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 8.8e-127 458.0 500 57.4
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 2.0e-126 456.8 417 67.1
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 2.6e-126 456.4 412 68.4
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 3.4e-126 456.1 438 64.4
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 1.7e-125 453.8 410 67.6
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 2.8e-125 453.0 476 64.7
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 3.7e-125 452.6 421 68.9
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 4.8e-125 452.2 482 63.3
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 4.8e-125 452.2 424 66.0
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.2e-123 447.6 377 72.9
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 2.7e-123 446.4 432 66.7
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 2.7e-123 446.4 418 64.4
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 3.5e-123 446.0 410 67.3
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 4.5e-123 445.7 424 65.3
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 4.5e-123 445.7 475 63.8
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 7.7e-123 444.9 425 66.6
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 7.7e-123 444.9 464 65.1
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.3e-122 444.1 424 65.8
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 1.3e-122 444.1 431 67.3
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.3e-122 444.1 411 65.5
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 2.3e-122 443.4 425 65.6
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 1.1e-121 441.0 425 65.2
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 3.3e-121 439.5 425 64.7
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 5.5e-121 438.7 425 64.7
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 7.2e-121 438.3 421 65.3
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 1.6e-120 437.2 418 66.7
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 2.8e-120 436.4 421 65.3
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 6.1e-120 435.3 421 65.3
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 2.3e-119 433.3 432 61.8
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 4.0e-119 432.6 419 65.6
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 6.8e-119 431.8 427 64.6
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.4e-116 424.1 426 63.6
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 7.0e-116 421.8 415 63.9
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 9.2e-116 421.4 432 61.6
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 1.6e-115 420.6 519 52.8
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 4.5e-115 419.1 466 62.9
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 1.7e-114 417.2 421 64.1
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.5e-113 414.1 422 63.5
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 2.5e-113 413.3 415 62.7
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 4.3e-113 412.5 420 65.7
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 2.8e-112 409.8 406 65.0
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 3.6e-112 409.5 422 62.3
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 8.0e-112 408.3 408 62.5
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 8.0e-112 408.3 428 63.3
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 5.2e-111 405.6 412 62.6
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 2.0e-110 403.7 416 62.5
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.4e-110 402.9 420 61.7
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 5.8e-110 402.1 381 66.1
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 9.8e-110 401.4 401 64.6
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 9.8e-110 401.4 436 61.2
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 1.1e-108 397.9 414 61.6
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 1.4e-108 397.5 422 61.4
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 1.4e-108 397.5 414 61.6
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 9.2e-108 394.8 421 61.5
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 9.2e-108 394.8 418 62.0
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 4.6e-107 392.5 419 61.3
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 7.8e-107 391.7 425 60.7
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.0e-106 391.3 418 62.0
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 2.3e-106 390.2 426 61.0
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 2.3e-106 390.2 426 61.0
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 2.3e-106 390.2 408 61.3
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 3.0e-106 389.8 422 60.4
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 6.6e-106 388.7 657 45.8
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 7.3e-105 385.2 497 56.7
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 8.0e-104 381.7 429 59.4
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 1.8e-103 380.6 413 60.8
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 2.0e-102 377.1 421 59.9
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 1.7e-101 374.0 425 59.1
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 5.4e-100 369.0 409 61.4
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.0e-94 350.5 421 54.4
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.0e-94 350.5 421 54.4
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 9.2e-92 341.7 407 56.5
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 7.8e-91 338.6 426 53.8
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 1.0e-90 338.2 359 60.2
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.7e-90 337.4 373 57.1
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 1.5e-89 334.3 408 54.2
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 9.5e-89 331.6 412 53.6
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.4e-84 317.8 286 62.9
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 3.9e-82 309.7 375 58.1
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 2.1e-80 303.9 285 63.9
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 3.6e-80 303.1 286 64.0
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 4.0e-79 299.7 292 60.3
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 6.4e-77 292.4 323 61.0
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 2.4e-76 290.4 412 51.7
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 3.5e-75 286.6 418 53.6
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 4.6e-75 286.2 291 62.2
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 4.6e-75 286.2 342 54.7
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 1.6e-72 277.7 274 63.5
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 8.1e-72 275.4 282 59.9
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 6.4e-69 265.8 632 40.7
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 3.3e-65 253.4 322 55.9
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-60 237.7 186 71.5
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 2.5e-60 237.3 322 52.5
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 2.3e-58 230.7 415 47.0
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 3.3e-57 226.9 382 45.5
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 4.5e-54 216.5 254 66.9
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 2.2e-48 197.6 269 51.3
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 2.8e-48 197.2 516 38.2
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 1.2e-38 165.2 102 84.3
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 5.5e-36 156.4 113 72.6
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.5e-33 148.3 119 73.9
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 7.4e-33 146.0 194 49.0
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 2.2e-32 144.4 364 32.7
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 2.0e-30 137.9 87 83.9
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 7.7e-30 136.0 313 41.9
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.1e-25 122.1 161 63.4
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.2e-22 112.1 58 89.7
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 5.9e-22 109.8 97 82.5
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 7.7e-22 109.4 79 74.7
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 4.7e-19 100.1 93 64.5
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 3.0e-18 97.4 92 77.2
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.3e-16 92.0 96 60.4
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.8e-16 90.9 79 65.8
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 8.3e-16 89.4 64 75.0
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 5.4e-15 86.7 177 48.6
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.7e-11 73.6 88 52.3
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 8.8e-10 69.3 98 46.9
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 1.7e-08 65.1 39 87.2
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 3.7e-08 63.9 100 36.0
C09p44560 Brassica napus HOM05D041588 ORTHO05D006779 2.4e-07 61.2 69 58.0
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 3.1e-07 60.8 43 69.8


User provided reference genes

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