Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 1.6e-96 356.3 209 100.0
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.5e-57 226.9 207 62.8
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 2.6e-46 189.5 201 62.2
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 3.4e-46 189.1 201 56.2
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 4.9e-45 185.3 204 52.5
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 6.4e-45 184.9 178 60.1
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 7.1e-44 181.4 201 56.2
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 1.6e-43 180.3 201 59.7
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 3.9e-42 175.6 171 60.2
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 5.1e-42 175.3 203 53.7
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 1.1e-41 174.1 201 53.2
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 1.1e-41 174.1 201 54.2
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 1.5e-41 173.7 202 52.5
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.9e-41 173.3 203 52.2
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 3.3e-41 172.6 203 53.7
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 5.6e-41 171.8 203 52.2
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 9.6e-41 171.0 203 51.2
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.6e-40 170.2 201 50.2
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 2.8e-40 169.5 196 58.7
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 4.0e-39 165.6 203 55.2
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 5.3e-39 165.2 206 49.5
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 6.9e-39 164.9 202 55.0
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 9.0e-39 164.5 204 50.0
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 2.0e-38 163.3 201 54.2
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 1.4e-36 157.1 201 45.3
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 1.4e-36 157.1 201 45.3
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.9e-36 156.8 200 48.5
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.4e-36 156.4 204 49.0
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 4.2e-36 155.6 171 53.2
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 9.3e-36 154.5 201 47.8
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.0e-34 151.0 216 46.8
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 3.0e-34 149.4 171 51.5
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.5e-33 147.1 201 53.2
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 1.5e-33 147.1 201 50.7
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 1.9e-33 146.7 201 45.3
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 3.3e-33 146.0 200 44.5
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 4.3e-33 145.6 171 49.7
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 5.6e-33 145.2 171 50.9
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 5.6e-33 145.2 171 50.9
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 2.1e-32 143.3 171 49.7
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 4.8e-32 142.1 201 51.2
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 4.8e-32 142.1 170 48.8
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.1e-32 141.4 230 47.8
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.0e-30 136.7 201 42.3
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 5.8e-30 135.2 171 48.5
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 5.8e-30 135.2 201 49.3
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 4.9e-29 132.1 201 44.8
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 8.4e-29 131.3 201 41.8
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 4.2e-28 129.0 201 44.8
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.6e-27 127.1 170 51.2
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 1.0e-26 124.4 167 45.5
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 8.7e-26 121.3 201 41.8
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 1.1e-25 120.9 162 45.1
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.5e-25 120.6 171 50.3
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 5.6e-25 118.6 236 43.2
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 1.6e-24 117.1 162 45.1
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.1e-24 116.7 191 42.4
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 2.1e-24 116.7 195 39.0
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 3.7e-24 115.9 167 44.9
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.1e-23 114.4 217 37.3
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 3.1e-23 112.8 180 38.9
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 4.0e-23 112.5 179 48.6
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.7e-21 107.1 167 46.7
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.9e-21 106.3 167 47.9
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 6.5e-21 105.1 110 59.1
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 8.4e-21 104.8 265 38.1
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.2e-20 102.8 167 43.7
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.1e-19 100.1 167 40.1
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 7.9e-19 98.2 162 45.7
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 7.9e-19 98.2 162 45.7
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 7.9e-19 98.2 162 45.7
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 1.8e-18 97.1 162 45.7
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 1.8e-18 97.1 162 45.7
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.8e-18 97.1 110 50.0
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 1.9e-17 93.6 124 46.8
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.6e-16 90.5 167 46.1
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 2.8e-16 89.7 104 48.1
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 3.1e-15 86.3 97 52.6
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 9.0e-15 84.7 93 51.6
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 9.0e-15 84.7 93 51.6
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.5e-14 84.0 74 60.8
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.5e-14 84.0 74 60.8
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.4e-14 82.8 97 60.8
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 7.9e-11 71.6 74 60.8
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 8.7e-10 68.2 57 63.2
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 4.8e-08 62.4 101 39.6


User provided reference genes

Program Settings