Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 1.5e-130 469.5 243 100.0
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 9.2e-128 460.3 243 97.9
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.1e-56 224.2 242 51.7
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 5.7e-53 211.8 172 62.2
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 1.2e-47 194.1 246 47.2
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 2.1e-47 193.4 242 47.1
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 8.8e-46 188.0 240 48.3
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 9.1e-43 177.9 204 47.1
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 1.6e-42 177.2 185 51.4
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.6e-42 176.4 271 41.3
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 3.5e-42 176.0 182 52.2
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 4.5e-42 175.6 256 44.9
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 4.5e-42 175.6 207 50.2
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 1.0e-41 174.5 225 47.6
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 1.0e-41 174.5 172 51.7
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 1.7e-41 173.7 242 45.5
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 1.7e-41 173.7 194 49.0
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 2.9e-41 172.9 247 43.3
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 8.5e-41 171.4 243 44.0
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 1.1e-40 171.0 218 46.8
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 1.9e-40 170.2 178 52.2
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 3.2e-40 169.5 225 44.4
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 4.2e-40 169.1 231 46.3
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 1.2e-39 167.5 230 46.1
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 2.7e-39 166.4 218 47.7
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 3.6e-39 166.0 190 49.5
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 3.6e-39 166.0 211 48.8
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 4.7e-39 165.6 163 53.4
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 8.0e-39 164.9 225 43.6
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 8.0e-39 164.9 183 49.2
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 1.4e-38 164.1 199 50.3
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 1.8e-38 163.7 215 47.4
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.8e-38 163.7 175 53.1
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 4.0e-38 162.5 137 56.9
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 4.0e-38 162.5 245 40.8
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 5.2e-38 162.2 215 45.6
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 8.8e-38 161.4 199 47.7
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 1.2e-37 161.0 183 48.1
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 1.2e-37 161.0 209 43.1
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 1.5e-37 160.6 242 44.6
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 4.4e-37 159.1 244 42.2
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 9.7e-37 157.9 216 43.5
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.3e-36 157.5 232 42.7
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 1.7e-36 157.1 245 40.8
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 3.7e-36 156.0 243 42.0
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 4.8e-36 155.6 244 41.8
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 4.8e-36 155.6 244 40.6
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 6.3e-36 155.2 208 43.8
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 3.1e-35 152.9 157 49.7
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 3.1e-35 152.9 164 47.0
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 3.1e-35 152.9 185 49.7
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 5.3e-35 152.1 211 45.0
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.6e-34 150.6 165 47.9
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 2.0e-34 150.2 222 41.9
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 2.7e-34 149.8 182 42.9
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 5.9e-34 148.7 221 40.3
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 5.0e-33 145.6 240 37.1
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 8.5e-33 144.8 248 39.1
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 1.2e-31 141.0 146 50.0
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 3.0e-30 136.3 147 46.9
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 4.0e-30 136.0 188 42.6
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 8.8e-30 134.8 187 44.9
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.5e-29 134.0 216 41.2
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.5e-29 134.0 224 39.7
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 5.7e-29 132.1 158 48.7
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 5.7e-29 132.1 158 48.7
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 5.7e-29 132.1 221 35.7
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 7.5e-29 131.7 158 48.7
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 1.3e-28 131.0 182 41.2
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 1.7e-28 130.6 158 47.5
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 2.2e-28 130.2 158 48.1
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 2.8e-28 129.8 235 39.6
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.7e-28 129.4 262 37.4
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 6.3e-28 128.6 167 46.1
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 6.3e-28 128.6 241 36.9
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.4e-27 127.5 207 40.6
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 3.5e-26 122.9 116 52.6
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 6.6e-25 118.6 218 38.5
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 8.6e-25 118.2 117 53.0
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 6.8e-22 108.6 190 35.8
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.5e-21 107.5 173 38.2
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 3.4e-21 106.3 154 36.4
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 4.4e-21 105.9 153 37.9
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 4.4e-21 105.9 152 38.8
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 4.4e-21 105.9 146 40.4
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 5.7e-21 105.5 173 38.2
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 1.3e-20 104.4 160 36.9
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 1.7e-20 104.0 158 34.8
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 2.2e-20 103.6 193 33.2
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 2.2e-20 103.6 154 35.1
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 2.8e-20 103.2 156 38.5
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 3.7e-20 102.8 187 34.2
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 3.7e-20 102.8 153 37.3
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 8.3e-20 101.7 178 35.4
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 4.1e-19 99.4 129 38.8
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 5.4e-19 99.0 156 34.0
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.6e-18 97.4 178 32.6
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 1.6e-18 97.4 131 36.6
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 1.6e-18 97.4 131 36.6
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 2.0e-18 97.1 151 36.4
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 2.0e-18 97.1 155 34.2
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 2.0e-18 97.1 130 36.9
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 2.0e-18 97.1 129 37.2
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 2.7e-18 96.7 153 33.3
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 4.5e-18 95.9 95 50.5
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 5.9e-18 95.5 130 36.2
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 2.3e-17 93.6 151 35.1
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 3.9e-17 92.8 152 34.2
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 8.6e-17 91.7 158 32.9
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.1e-16 91.3 169 33.1
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.1e-16 91.3 169 33.1
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.1e-16 91.3 178 32.6
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 1.1e-16 91.3 133 37.6
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 2.5e-16 90.1 78 53.8
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.3e-16 89.7 168 30.4
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 3.3e-16 89.7 170 32.4
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 4.3e-16 89.4 157 33.8
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 4.3e-16 89.4 169 32.5
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 4.3e-16 89.4 169 32.5
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 4.3e-16 89.4 176 33.5
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 5.6e-16 89.0 133 36.8
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 7.3e-16 88.6 118 38.1
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 9.5e-16 88.2 193 31.6
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 9.5e-16 88.2 177 33.9
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 9.5e-16 88.2 159 31.4
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 9.5e-16 88.2 122 33.6
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 9.5e-16 88.2 188 31.4
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 1.2e-15 87.8 156 32.7
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 1.2e-15 87.8 164 32.9
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 1.2e-15 87.8 156 32.7
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 1.2e-15 87.8 164 32.9
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 1.6e-15 87.4 200 31.5
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.6e-15 87.4 151 36.4
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.1e-15 87.0 131 37.4
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 2.1e-15 87.0 164 32.9
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.1e-15 87.0 160 32.5
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 8.0e-15 85.1 180 32.2
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 1.0e-14 84.7 122 36.1
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.4e-14 84.3 98 36.7
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.8e-14 84.0 131 32.8
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 2.3e-14 83.6 126 40.5
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 2.6e-13 80.1 122 34.4
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 2.6e-13 80.1 138 31.9
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 3.4e-13 79.7 137 35.0
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 4.4e-13 79.3 151 31.1
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 5.8e-13 79.0 130 33.1
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 5.8e-13 79.0 137 33.6
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 9.8e-13 78.2 131 34.4
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 9.8e-13 78.2 96 36.5
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 2.2e-12 77.0 150 30.7
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 8.3e-12 75.1 120 36.7
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 1.4e-11 74.3 89 37.1
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.2e-11 73.2 131 32.1
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 1.0e-09 68.2 88 44.3
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 5.0e-09 65.9 106 36.8
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 6.6e-09 65.5 115 34.8
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 2.5e-08 63.5 93 35.5
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 6.2e-07 58.9 130 30.8
Nn5g28818 Nelumbo nucifera HOM05D007205 ORTHO05D009175 1.1e-06 58.2 134 30.6


User provided reference genes

Program Settings