Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 4.3e-73 278.1 161 100.0
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 3.6e-64 248.4 195 79.0
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 6.5e-21 104.8 150 52.0
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.9e-20 103.2 162 48.8
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 4.2e-20 102.1 170 46.5
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 2.3e-18 96.3 148 44.6
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 6.7e-18 94.7 158 53.8
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 8.8e-18 94.4 148 43.9
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 8.8e-18 94.4 148 43.9
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 1.1e-17 94.0 148 43.9
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 1.1e-17 94.0 148 43.9
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.1e-17 94.0 172 51.7
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.0e-17 93.2 154 47.4
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 3.3e-17 92.4 151 47.7
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 3.3e-17 92.4 155 50.3
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 3.3e-17 92.4 155 45.2
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 4.4e-17 92.0 165 51.5
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 1.3e-16 90.5 149 43.6
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.3e-16 90.5 152 43.4
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.7e-16 90.1 154 46.8
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 2.2e-16 89.7 131 59.5
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.2e-16 89.7 154 50.6
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 2.2e-16 89.7 166 50.0
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 3.7e-16 89.0 160 50.0
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 4.8e-16 88.6 159 45.9
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 6.3e-16 88.2 149 54.4
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 8.2e-16 87.8 148 42.6
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 8.2e-16 87.8 148 42.6
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 1.1e-15 87.4 160 41.9
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 1.1e-15 87.4 150 45.3
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 1.4e-15 87.0 173 49.1
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 1.8e-15 86.7 141 44.0
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 1.8e-15 86.7 141 44.0
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 2.4e-15 86.3 171 46.8
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 2.4e-15 86.3 165 45.5
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 3.1e-15 85.9 145 41.4
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 5.3e-15 85.1 162 40.1
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 6.9e-15 84.7 155 43.2
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 6.9e-15 84.7 149 47.7
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 6.9e-15 84.7 185 39.5
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 6.9e-15 84.7 185 39.5
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 6.9e-15 84.7 137 48.9
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 9.1e-15 84.3 163 41.7
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 9.1e-15 84.3 135 47.4
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 1.2e-14 84.0 167 41.9
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.2e-14 84.0 166 42.2
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 1.5e-14 83.6 180 43.3
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.5e-14 83.6 167 40.7
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 1.5e-14 83.6 164 50.0
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 2.0e-14 83.2 176 44.3
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 2.0e-14 83.2 167 40.7
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 2.0e-14 83.2 159 49.1
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 2.0e-14 83.2 171 40.4
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 2.6e-14 82.8 166 46.4
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 3.4e-14 82.4 160 38.8
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 4.5e-14 82.0 177 45.8
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 5.9e-14 81.6 152 44.1
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 5.9e-14 81.6 75 58.7
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 5.9e-14 81.6 158 39.9
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 7.7e-14 81.3 155 40.6
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 7.7e-14 81.3 165 38.2
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 1.3e-13 80.5 168 37.5
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 1.3e-13 80.5 168 37.5
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 1.3e-13 80.5 164 45.1
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.7e-13 80.1 154 44.2
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 2.2e-13 79.7 131 46.6
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 2.9e-13 79.3 75 57.3
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 2.9e-13 79.3 168 36.9
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 2.9e-13 79.3 168 36.9
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 2.9e-13 79.3 151 51.7
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 2.9e-13 79.3 160 46.9
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 2.9e-13 79.3 165 39.4
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 3.8e-13 79.0 151 43.0
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 3.8e-13 79.0 150 44.0
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 5.0e-13 78.6 155 41.9
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 5.0e-13 78.6 154 43.5
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 5.0e-13 78.6 166 45.2
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 8.5e-13 77.8 166 40.4
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 8.5e-13 77.8 78 57.7
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 1.1e-12 77.4 168 36.9
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.1e-12 77.4 72 62.5
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 2.5e-12 76.3 152 38.8
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 2.5e-12 76.3 149 48.3
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 4.2e-12 75.5 132 40.2
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 4.2e-12 75.5 150 42.7
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 5.5e-12 75.1 153 40.5
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 5.5e-12 75.1 172 36.6
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 5.5e-12 75.1 162 40.7
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 7.2e-12 74.7 159 36.5
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 7.2e-12 74.7 154 37.0
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 7.2e-12 74.7 159 36.5
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 7.2e-12 74.7 154 37.0
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 7.2e-12 74.7 163 43.6
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 7.2e-12 74.7 157 38.2
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 7.2e-12 74.7 157 45.9
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 9.4e-12 74.3 166 44.6
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 9.4e-12 74.3 152 38.2
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 2.1e-11 73.2 72 56.9
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 2.1e-11 73.2 154 37.7
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 2.1e-11 73.2 154 37.7
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 2.1e-11 73.2 121 43.8
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 2.7e-11 72.8 141 47.5
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 2.7e-11 72.8 148 47.3
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 3.6e-11 72.4 161 38.5
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 6.1e-11 71.6 156 45.5
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 6.1e-11 71.6 154 39.0
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 6.1e-11 71.6 162 39.5
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 8.0e-11 71.2 75 56.0
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 1.0e-10 70.9 164 37.2
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 1.4e-10 70.5 148 39.2
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 2.3e-10 69.7 154 37.0
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 2.3e-10 69.7 154 37.0
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 2.3e-10 69.7 154 37.0
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 3.0e-10 69.3 161 38.5
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 3.0e-10 69.3 162 43.2
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 3.0e-10 69.3 150 38.0
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 3.0e-10 69.3 158 35.4
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 3.0e-10 69.3 72 51.4
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 5.2e-10 68.6 160 37.5
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 8.8e-10 67.8 151 37.1
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 8.8e-10 67.8 169 36.7
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 1.1e-09 67.4 72 56.9
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.5e-09 67.0 164 38.4
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 2.0e-09 66.6 152 35.5
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 2.6e-09 66.2 158 43.7
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 3.3e-09 65.9 156 37.2
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 7.4e-09 64.7 81 53.1
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 9.7e-09 64.3 150 37.3
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 1.3e-08 63.9 72 54.2
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 1.3e-08 63.9 142 39.4
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 1.3e-08 63.9 126 38.9
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 2.2e-08 63.2 170 35.9
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 4.8e-08 62.0 152 42.8
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 8.2e-08 61.2 129 38.0
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 1.1e-07 60.8 162 36.4
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 1.4e-07 60.5 161 35.4
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 3.1e-07 59.3 156 44.2
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 3.1e-07 59.3 159 34.6
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 1.2e-06 57.4 159 40.3
Sc04g0008280 Simmondsia chinensis HOM05D005097 ORTHO05D006186 5.9e-06 55.1 152 38.2


User provided reference genes

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