Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 0.0e+00 1307.7 641 100.0
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 7.5e-262 907.1 650 69.4
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 2.4e-260 902.1 644 69.3
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 4.7e-256 887.9 649 67.0
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 3.0e-255 885.2 645 68.8
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 8.9e-255 883.6 646 68.9
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 2.6e-254 882.1 642 67.1
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 5.7e-254 880.9 644 67.7
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 1.7e-253 879.4 643 67.3
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 1.8e-252 875.9 635 68.3
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 2.0e-251 872.5 638 67.7
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 2.0e-251 872.5 644 67.4
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 2.7e-251 872.1 640 68.1
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 2.7e-251 872.1 650 67.5
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 5.9e-251 870.9 648 66.2
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.3e-250 869.8 637 67.8
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 3.1e-247 858.6 648 68.1
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 5.2e-247 857.8 635 66.5
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 5.2e-247 857.8 639 66.0
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 6.8e-247 857.4 652 65.8
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.2e-246 856.7 646 65.5
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 2.6e-246 855.5 651 65.6
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 4.4e-246 854.7 640 67.7
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 7.5e-246 854.0 647 66.2
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 9.8e-246 853.6 638 67.1
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.3e-245 853.2 664 65.2
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.9e-245 852.0 678 64.0
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.1e-244 850.1 653 65.7
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 1.4e-244 849.7 648 66.7
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 5.4e-244 847.8 604 68.2
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 9.2e-244 847.0 641 65.2
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 2.0e-243 845.9 648 66.7
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 6.0e-243 844.3 642 65.4
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 1.0e-242 843.6 643 64.7
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.3e-242 842.4 660 65.5
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 8.6e-242 840.5 660 65.3
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 1.5e-241 839.7 642 66.4
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 1.9e-241 839.3 646 64.2
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 1.9e-241 839.3 636 64.5
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 1.9e-241 839.3 644 64.8
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 3.3e-241 838.6 646 63.9
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 5.6e-241 837.8 639 65.6
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 7.3e-241 837.4 648 64.2
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 1.6e-240 836.3 636 66.2
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 2.1e-240 835.9 647 65.1
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 2.8e-240 835.5 650 64.5
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 4.7e-240 834.7 644 64.1
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 4.7e-240 834.7 634 67.4
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 4.7e-240 834.7 640 65.9
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 1.8e-239 832.8 640 65.5
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 8.9e-239 830.5 636 66.2
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 8.9e-239 830.5 644 64.1
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 1.5e-238 829.7 645 64.5
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 2.0e-238 829.3 642 65.3
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 9.9e-238 827.0 661 61.7
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 9.9e-238 827.0 661 61.7
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 3.7e-237 825.1 630 66.2
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 3.7e-237 825.1 652 63.0
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 1.1e-236 823.5 641 62.4
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 1.9e-236 822.8 640 63.0
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 2.4e-236 822.4 645 64.0
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 3.2e-236 822.0 637 65.1
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 7.1e-236 820.8 641 64.4
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 3.5e-235 818.5 638 65.5
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 4.6e-235 818.1 672 61.8
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 7.8e-235 817.4 636 64.2
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 1.7e-234 816.2 660 62.0
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 2.3e-234 815.8 642 62.3
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 2.5e-233 812.4 638 65.0
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 3.3e-233 812.0 643 63.6
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 7.3e-233 810.8 639 63.5
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 1.2e-232 810.1 640 64.7
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 3.4e-230 802.0 632 63.8
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 2.9e-229 798.9 645 63.3
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 8.4e-229 797.3 666 61.3
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 3.2e-228 795.4 641 61.3
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 2.7e-227 792.3 635 63.0
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 1.7e-226 789.6 663 62.4
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 3.3e-225 785.4 641 63.3
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 3.3e-225 785.4 643 61.4
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 6.9e-223 777.7 630 62.5
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 3.2e-220 768.8 581 64.9
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 1.5e-217 760.0 635 60.2
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 5.6e-217 758.1 678 57.8
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 2.2e-205 719.5 645 58.0
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 1.4e-204 716.8 642 57.8
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 5.6e-201 704.9 494 70.4
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 2.4e-199 699.5 591 59.4
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 3.8e-189 665.6 455 71.9
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 2.3e-186 656.4 623 54.1
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 2.6e-182 642.9 619 53.6
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 9.4e-180 634.4 538 60.0
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 3.0e-178 629.4 640 52.5
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 3.9e-170 602.4 504 60.5
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 3.7e-160 569.3 619 49.9
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 1.0e-149 534.6 358 70.9
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 2.5e-148 530.0 435 61.8
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 7.0e-143 511.9 333 75.4
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 1.7e-136 490.7 332 72.9
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 1.4e-127 461.1 464 51.1
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.2e-97 361.7 416 49.8
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 1.4e-87 328.2 170 94.7
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 6.5e-72 276.2 272 52.9
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 8.2e-67 259.2 189 66.7
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 1.2e-65 255.4 176 64.8
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 2.2e-59 234.6 202 60.4
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 9.1e-50 202.6 136 71.3
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 1.2e-49 202.2 159 62.9
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 2.1e-46 191.4 195 51.8
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 6.1e-46 189.9 151 64.2
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 8.3e-43 179.5 147 62.6
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 2.1e-30 138.3 73 84.9
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 4.4e-28 130.6 101 61.4
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 2.2e-27 128.3 112 56.2
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 4.4e-20 104.0 64 75.0
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 9.2e-18 96.3 78 56.4


User provided reference genes

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