Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 9.7e-166 587.0 362 100.0
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 5.3e-156 554.7 362 95.6
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 1.4e-52 211.1 346 48.0
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 6.1e-51 205.7 357 48.5
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.0e-49 200.7 326 48.8
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 6.3e-48 195.7 294 48.6
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 1.2e-46 191.4 319 50.5
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.3e-45 188.0 265 49.1
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 1.3e-45 188.0 350 45.7
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 2.2e-45 187.2 253 49.4
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 2.9e-45 186.8 277 46.6
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 2.5e-44 183.7 313 47.6
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 7.2e-44 182.2 317 48.9
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 9.4e-44 181.8 335 45.4
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 2.7e-43 180.3 303 46.5
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 4.7e-43 179.5 309 47.2
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 6.1e-43 179.1 297 47.5
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 6.1e-43 179.1 318 46.9
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 8.0e-43 178.7 296 49.3
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.0e-42 178.3 311 46.9
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 1.8e-42 177.6 310 48.1
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 3.0e-42 176.8 357 42.9
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 3.0e-42 176.8 357 42.9
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 3.0e-42 176.8 314 47.5
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.2e-42 176.0 358 48.9
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 6.7e-42 175.6 295 48.5
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 8.8e-42 175.3 390 44.6
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 1.5e-41 174.5 316 48.1
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.5e-41 174.5 326 45.1
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 3.3e-41 173.3 298 46.3
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 4.4e-41 172.9 294 49.3
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 4.4e-41 172.9 377 41.1
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 7.4e-41 172.2 264 48.5
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 7.4e-41 172.2 283 46.6
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 7.4e-41 172.2 301 47.5
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 7.4e-41 172.2 264 45.8
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.7e-40 171.0 292 46.9
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 2.2e-40 170.6 346 43.1
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 4.8e-40 169.5 259 46.7
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 4.8e-40 169.5 291 43.6
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 8.2e-40 168.7 314 45.5
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.1e-39 168.3 371 41.8
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 1.4e-39 167.9 346 44.2
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.4e-39 167.9 350 46.9
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 1.8e-39 167.5 298 46.0
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 2.4e-39 167.2 254 47.6
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 5.3e-39 166.0 280 44.3
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 5.3e-39 166.0 385 43.1
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 9.1e-39 165.2 311 46.3
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 1.6e-38 164.5 251 46.2
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 4.5e-38 162.9 266 45.5
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 4.5e-38 162.9 266 45.5
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 7.7e-38 162.2 390 40.8
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.3e-37 161.4 368 41.6
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 1.7e-37 161.0 331 43.5
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 2.2e-37 160.6 303 46.9
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 2.9e-37 160.2 303 46.9
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 2.9e-37 160.2 316 44.0
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 2.9e-37 160.2 327 40.1
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 3.8e-37 159.8 303 46.9
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 5.0e-37 159.5 417 41.5
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 8.5e-37 158.7 363 45.7
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 1.1e-36 158.3 314 44.3
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 1.5e-36 157.9 255 45.1
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 2.5e-36 157.1 318 40.9
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 2.5e-36 157.1 313 42.2
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 4.2e-36 156.4 372 39.0
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 5.5e-36 156.0 266 45.1
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 5.5e-36 156.0 108 70.4
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 5.5e-36 156.0 396 38.4
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 7.2e-36 155.6 304 45.4
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 1.6e-35 154.5 94 78.7
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 2.7e-35 153.7 307 46.9
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 3.6e-35 153.3 350 41.4
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 1.0e-34 151.8 167 53.3
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 2.3e-34 150.6 310 46.1
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 3.0e-34 150.2 259 41.7
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 4.0e-34 149.8 224 44.2
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.2e-33 148.3 410 39.8
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 2.0e-33 147.5 366 39.1
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 2.0e-33 147.5 267 41.2
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 3.3e-33 146.7 387 35.9
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 4.4e-33 146.4 382 39.5
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 4.4e-33 146.4 352 41.2
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 7.5e-33 145.6 103 73.8
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 9.7e-33 145.2 196 47.4
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.7e-32 144.4 110 70.0
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 3.7e-32 143.3 311 39.5
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 4.8e-32 142.9 112 68.8
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 6.3e-32 142.5 120 65.8
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 8.2e-32 142.1 389 37.0
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.1e-31 141.7 322 42.2
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.4e-31 141.4 248 42.3
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 4.1e-31 139.8 428 35.7
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 7.0e-31 139.0 352 38.9
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 1.2e-30 138.3 344 36.6
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 1.0e-29 135.2 92 73.9
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 1.3e-29 134.8 296 39.9
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 2.9e-29 133.7 248 42.3
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 2.9e-29 133.7 244 38.9
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 2.7e-27 127.1 239 39.3
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 4.0e-26 123.2 75 80.0
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 8.8e-26 122.1 256 41.0
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.7e-24 116.7 270 43.0
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 1.8e-23 114.4 102 59.8
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 1.8e-23 114.4 269 39.4
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 1.1e-20 105.1 63 76.2
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.4e-18 98.2 265 41.9
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 5.7e-17 92.8 54 75.9
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 7.5e-17 92.4 54 81.5
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-15 88.6 75 68.0
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 2.4e-15 87.4 285 34.0
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 7.0e-15 85.9 54 72.2
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.6e-14 84.7 52 78.8
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 8.6e-13 79.0 195 35.4
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 3.3e-12 77.0 302 36.4
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 4.7e-11 73.2 198 35.9
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 3.4e-09 67.0 47 68.1
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 3.2e-07 60.5 102 40.2


User provided reference genes

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