Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 6.0e-55 217.2 107 100.0
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 6.0e-55 217.2 107 100.0
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.8e-44 181.8 107 78.5
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 4.7e-44 181.0 105 80.0
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 6.2e-44 180.6 105 79.0
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 3.1e-43 178.3 105 81.0
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 3.1e-43 178.3 104 80.8
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 3.1e-43 178.3 107 75.7
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 4.0e-43 177.9 105 78.1
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 6.8e-43 177.2 105 80.0
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 8.9e-43 176.8 105 79.0
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 8.9e-43 176.8 105 78.1
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 2.6e-42 175.3 105 79.0
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 3.4e-42 174.9 105 77.1
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 4.4e-42 174.5 105 76.2
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 9.9e-42 173.3 105 76.2
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.3e-41 172.9 103 80.6
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 1.3e-41 172.9 105 76.2
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 1.7e-41 172.6 105 74.3
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 2.2e-41 172.2 105 78.1
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 2.2e-41 172.2 105 76.2
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 2.9e-41 171.8 105 78.1
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 2.9e-41 171.8 103 79.6
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.9e-41 171.8 103 78.6
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.9e-41 171.8 103 79.6
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 3.8e-41 171.4 105 78.1
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 3.8e-41 171.4 105 78.1
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 4.9e-41 171.0 107 72.0
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 4.9e-41 171.0 105 76.2
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 6.4e-41 170.6 103 76.7
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 8.4e-41 170.2 103 77.7
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 1.1e-40 169.9 105 77.1
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 1.9e-40 169.1 105 74.3
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.9e-40 169.1 103 78.6
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 1.9e-40 169.1 104 77.9
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 2.4e-40 168.7 103 74.8
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 3.2e-40 168.3 105 75.2
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 4.1e-40 167.9 105 73.3
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 4.1e-40 167.9 105 74.3
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 5.4e-40 167.5 105 73.3
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.4e-40 167.5 105 73.3
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 5.4e-40 167.5 105 76.2
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 7.1e-40 167.2 105 72.4
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 7.1e-40 167.2 105 73.3
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 7.1e-40 167.2 105 73.3
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 7.1e-40 167.2 105 74.3
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 7.1e-40 167.2 105 74.3
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 9.2e-40 166.8 104 76.0
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 9.2e-40 166.8 105 74.3
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 1.2e-39 166.4 103 74.8
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.1e-39 165.6 105 73.3
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 2.1e-39 165.6 105 73.3
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 2.7e-39 165.2 103 74.8
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 73.3
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 73.3
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 73.3
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 76.2
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 74.3
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 75.2
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 4.6e-39 164.5 103 72.8
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 70.5
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 70.5
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 7.8e-39 163.7 103 73.8
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 7.8e-39 163.7 105 72.4
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.0e-38 163.3 104 73.1
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 1.0e-38 163.3 103 72.8
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 1.0e-38 163.3 105 70.5
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 1.3e-38 162.9 103 72.8
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 72.4
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 72.4
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 71.4
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 73.3
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 72.4
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 71.4
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 72.4
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 5.1e-38 161.0 103 72.8
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 6.6e-38 160.6 105 70.5
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 6.6e-38 160.6 105 73.3
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 8.6e-38 160.2 105 71.4
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 8.6e-38 160.2 105 74.3
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.1e-37 159.8 100 76.0
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 69.5
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 70.5
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 4.3e-37 157.9 104 68.3
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 5.6e-37 157.5 104 74.0
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 7.3e-37 157.1 97 76.3
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 9.6e-37 156.8 105 72.4
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 66.7
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 66.7
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 68.6
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 1.6e-36 156.0 101 74.3
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.6e-36 156.0 104 69.2
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 2.8e-36 155.2 105 71.4
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 6.2e-36 154.1 103 68.9
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 6.2e-36 154.1 105 66.7
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 5.2e-35 151.0 105 64.8
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 1.5e-34 149.4 92 73.9
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 2.6e-34 148.7 101 67.3
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.4e-34 147.9 105 67.6
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 7.6e-34 147.1 105 66.7
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 9.9e-34 146.7 102 67.6
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 4.9e-33 144.4 102 64.7
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 6.4e-33 144.1 133 54.1
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 1.2e-31 139.8 134 56.0
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 1.2e-31 139.8 105 59.0
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.7e-31 138.7 107 64.5
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 6.0e-31 137.5 94 67.0
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 3.9e-30 134.8 104 61.5
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 3.9e-30 134.8 77 79.2
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.6e-28 129.4 76 81.6
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.2e-26 123.2 103 56.3
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.2e-26 123.2 103 58.3
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.6e-26 122.1 78 74.4
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 5.8e-26 120.9 91 63.7
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 3.8e-25 118.2 100 52.0
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 4.9e-25 117.9 76 72.4
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.1e-23 112.5 83 60.2
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 3.5e-23 111.7 104 59.6
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 4.6e-23 111.3 95 53.7
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.0e-22 110.2 91 57.1
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.8e-22 109.4 70 75.7
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.8e-22 109.4 86 67.4
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 3.0e-22 108.6 105 55.2
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.1e-21 106.7 113 53.1
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.5e-21 106.3 70 74.3
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 1.5e-21 106.3 74 64.9
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 1.6e-20 102.8 66 69.7
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 4.0e-19 98.2 79 62.0
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.7e-15 85.5 50 80.0
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 3.5e-15 85.1 82 61.0
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 2.4e-11 72.4 46 67.4
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 1.2e-10 70.1 49 71.4
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 2.2e-09 65.9 84 40.5
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 5.5e-08 61.2 42 61.9
unitig_8.g4716 Utricularia gibba HOM05D000027 ORTHO05D002055 6.7e-06 54.3 97 32.0


User provided reference genes

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