Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.4e-50 203.0 129 100.0
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 2.1e-30 136.0 129 67.4
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 6.1e-30 134.4 130 63.1
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 1.8e-29 132.9 131 58.0
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 2.6e-28 129.0 136 57.4
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.7e-27 126.3 132 56.1
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.7e-27 126.3 129 60.5
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 2.8e-27 125.6 130 57.7
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 3.7e-27 125.2 130 63.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 4.9e-27 124.8 130 61.5
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 8.3e-27 124.0 130 55.4
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 1.1e-26 123.6 130 63.8
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 1.8e-26 122.9 129 63.6
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 2.4e-26 122.5 132 54.5
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 2.4e-26 122.5 132 56.1
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 2.4e-26 122.5 132 56.1
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 4.1e-26 121.7 130 56.2
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 5.4e-26 121.3 138 53.6
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 7.0e-26 120.9 128 55.5
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 7.0e-26 120.9 129 61.2
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 9.2e-26 120.6 130 59.2
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 9.2e-26 120.6 129 58.9
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 9.2e-26 120.6 130 59.2
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 9.2e-26 120.6 134 51.5
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 1.2e-25 120.2 129 59.7
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 3.5e-25 118.6 129 61.2
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.5e-25 118.6 130 60.0
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 4.5e-25 118.2 131 60.3
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 5.9e-25 117.9 130 55.4
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 7.8e-25 117.5 130 56.9
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.3e-24 116.7 129 55.0
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.3e-24 116.7 130 56.9
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 1.3e-24 116.7 129 55.8
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 1.7e-24 116.3 131 58.8
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 1.7e-24 116.3 131 58.8
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 2.3e-24 115.9 129 64.3
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 2.9e-24 115.5 130 58.5
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 2.9e-24 115.5 130 65.4
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 5.0e-24 114.8 130 62.3
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 6.6e-24 114.4 129 58.9
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 6.6e-24 114.4 135 65.2
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 6.6e-24 114.4 131 58.8
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 8.6e-24 114.0 131 54.2
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 1.1e-23 113.6 137 56.2
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 1.1e-23 113.6 131 55.7
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.1e-23 113.6 131 63.4
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.9e-23 112.8 135 51.9
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 2.5e-23 112.5 129 60.5
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 2.5e-23 112.5 129 60.5
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 2.5e-23 112.5 129 60.5
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 3.3e-23 112.1 133 58.6
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 4.3e-23 111.7 130 54.6
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 4.3e-23 111.7 130 56.2
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 4.3e-23 111.7 130 53.1
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 5.6e-23 111.3 129 55.0
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 5.6e-23 111.3 136 58.8
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 9.5e-23 110.5 130 55.4
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 9.5e-23 110.5 130 56.2
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 9.5e-23 110.5 130 56.2
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 1.2e-22 110.2 130 55.4
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.6e-22 109.8 133 60.2
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 2.1e-22 109.4 131 57.3
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 2.1e-22 109.4 130 66.9
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 2.8e-22 109.0 132 56.1
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.8e-22 109.0 128 53.1
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 4.7e-22 108.2 133 51.1
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 6.1e-22 107.8 130 48.5
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 8.0e-22 107.5 137 59.9
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.0e-21 107.1 130 57.7
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.0e-21 107.1 130 68.5
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 1.0e-21 107.1 131 62.6
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.0e-21 107.1 127 54.3
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 1.4e-21 106.7 130 53.8
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 2.3e-21 105.9 125 56.8
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 2.3e-21 105.9 127 68.5
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 3.0e-21 105.5 130 63.1
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 6.8e-21 104.4 128 52.3
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 8.9e-21 104.0 134 57.5
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.2e-20 103.6 138 55.1
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 1.2e-20 103.6 130 63.8
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 1.5e-20 103.2 133 65.4
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 2.0e-20 102.8 139 56.1
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 4.4e-20 101.7 125 66.4
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 9.8e-20 100.5 136 53.7
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.8e-18 96.3 112 47.3
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 2.7e-17 92.4 121 51.2
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.0e-16 90.5 53 84.9
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.0e-16 90.5 53 84.9
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.0e-16 89.0 53 83.0
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 7.3e-15 84.3 130 44.6
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 1.8e-13 79.7 53 71.7
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 5.2e-13 78.2 138 39.1
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 8.9e-13 77.4 42 85.7
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.5e-12 76.6 116 41.4
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 9.8e-12 73.9 130 40.8
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 4.1e-10 68.6 58 62.1
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 9.2e-10 67.4 48 70.8
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 6.6e-08 61.2 130 37.7


User provided reference genes

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