Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 5.3e-160 567.8 315 100.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.2e-149 531.9 315 92.1
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 6.6e-94 348.2 239 77.8
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.6e-87 325.5 211 81.5
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.3e-85 319.3 231 77.1
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.6e-85 318.5 236 73.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.6e-84 315.8 236 72.5
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.2e-83 312.0 261 65.1
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.4e-82 309.3 245 68.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 3.8e-81 305.8 209 78.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 3.8e-81 305.8 247 68.4
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 8.4e-81 304.7 224 73.7
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.1e-80 304.3 234 70.1
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.4e-80 303.9 255 67.5
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.4e-80 303.1 221 74.2
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 5.4e-80 302.0 193 85.0
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 7.1e-80 301.6 221 70.1
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 9.2e-80 301.2 219 74.4
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.1e-79 300.1 242 70.2
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 2.1e-79 300.1 207 79.7
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.7e-79 299.7 218 70.2
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 4.6e-79 298.9 230 70.9
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.0e-78 297.7 208 76.0
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.3e-78 297.4 288 59.4
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.7e-78 297.0 226 69.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 3.0e-78 296.2 231 70.1
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 3.9e-78 295.8 240 71.2
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 5.1e-78 295.4 208 76.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 5.1e-78 295.4 237 67.1
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.1e-77 294.3 222 72.5
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.5e-77 293.9 208 77.4
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.3e-77 292.7 213 75.6
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.3e-77 292.7 211 73.5
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.3e-77 292.4 264 64.4
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 9.6e-77 291.2 205 77.1
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.2e-76 290.8 208 75.5
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.2e-76 290.8 208 76.4
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.2e-76 290.8 236 67.8
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.2e-76 290.8 205 76.6
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.6e-76 290.4 226 69.9
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.6e-76 290.4 225 70.7
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.1e-76 290.0 208 76.0
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.7e-76 288.9 208 75.5
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-75 287.7 236 66.9
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.4e-75 286.6 232 65.9
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.0e-75 285.8 261 62.1
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 6.9e-75 285.0 218 68.8
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.5e-74 283.9 212 70.8
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.5e-74 283.9 218 71.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.4e-74 282.3 220 69.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 5.8e-74 282.0 224 69.2
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 9.9e-74 281.2 213 69.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.3e-73 280.8 255 62.7
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.1e-72 277.7 213 69.0
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.9e-72 276.9 211 69.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.9e-72 276.9 232 67.7
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.4e-72 276.6 250 60.8
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.4e-72 276.6 201 74.1
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.2e-72 276.2 175 84.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.1e-71 273.5 227 66.1
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 2.1e-71 273.5 241 63.9
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.5e-71 272.7 209 71.8
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.5e-71 272.7 209 71.8
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 6.0e-71 271.9 212 67.5
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 6.0e-71 271.9 263 60.5
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-70 270.4 242 64.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.3e-70 270.0 238 61.3
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.5e-69 266.5 251 62.9
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.3e-69 265.8 291 58.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.3e-69 265.0 202 67.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.1e-68 263.5 209 69.9
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.4e-67 260.0 291 57.4
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.0e-66 256.9 208 64.9
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.4e-66 256.1 282 56.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 7.6e-66 255.0 189 74.1
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.9e-65 253.1 217 65.9
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 3.8e-65 252.7 300 53.0
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 8.4e-65 251.5 202 69.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 8.4e-65 251.5 204 62.3
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 8.4e-65 251.5 257 59.9
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.4e-64 250.8 202 63.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.4e-64 250.0 180 72.8
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 9.3e-64 248.1 197 67.5
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.1e-63 246.9 235 58.7
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.7e-63 246.5 197 63.5
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.7e-63 246.5 176 74.4
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 6.0e-63 245.4 211 62.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.0e-62 244.6 197 69.0
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.0e-62 244.6 197 69.0
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.7e-62 241.5 211 62.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.6e-60 237.3 227 61.2
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 6.9e-59 231.9 176 68.8
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 4.9e-57 225.7 176 71.6
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.9e-56 223.8 136 85.3
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.4e-56 223.4 238 55.5
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 6.0e-55 218.8 151 75.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 5.1e-54 215.7 171 68.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.1e-53 214.5 141 78.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 6.9e-51 205.3 229 55.9
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.3e-49 201.1 193 60.6
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.9e-49 199.9 190 61.1
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.9e-48 197.2 198 59.1
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 3.9e-46 189.5 240 43.3
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.4e-43 181.0 171 60.8
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.6e-42 175.3 137 65.0
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.8e-41 172.9 114 78.1
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.2e-39 167.9 103 85.4
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.1e-38 162.5 219 41.6
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.9e-37 160.6 124 69.4
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 7.4e-37 158.7 221 47.1
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.3e-33 147.9 253 43.1
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.9e-32 144.1 111 72.1
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 7.4e-29 132.1 116 63.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.1e-24 118.2 199 37.2
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.9e-24 117.5 87 71.3
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 7.0e-19 99.0 178 33.7
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 2.9e-17 93.6 80 63.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 8.5e-17 92.0 194 32.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.7e-15 87.0 69 69.6
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.8e-11 74.3 90 48.9
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.2e-10 71.6 53 66.0
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 7.2e-08 62.4 58 56.9


User provided reference genes

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