Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6303 Papaver somniferum HOM05D005046 ORTHO05D006194 1.2e-50 203.0 112 100.0
PSO017G4602 Papaver somniferum HOM05D005046 ORTHO05D006194 2.8e-47 191.8 112 96.4
PSO210G4010 Papaver somniferum HOM05D005046 ORTHO05D006194 1.8e-41 172.6 112 83.0
PSO761G0203 Papaver somniferum HOM05D005046 ORTHO05D006194 1.8e-41 172.6 112 83.0
Aqoxy5G02541 Aquilegia oxysepala HOM05D005046 ORTHO05D006194 1.0e-36 156.8 112 77.7
MD13G1153200 Malus domestica HOM05D005046 ORTHO05D006194 3.8e-36 154.8 112 76.8
TAR636G1364 Trochodendron aralioides HOM05D005046 ORTHO05D006194 3.8e-36 154.8 112 75.9
Lalb_Chr20g0120821 Lupinus albus HOM05D005046 ORTHO05D006194 5.0e-36 154.5 112 77.7
GSVIVG01034987001 Vitis vinifera HOM05D005046 ORTHO05D006194 1.1e-35 153.3 112 75.0
Glyma.17G033800 Glycine max HOM05D005046 ORTHO05D006194 1.4e-35 152.9 112 75.0
HanXRQChr11g0353491 Helianthus annuus HOM05D005046 ORTHO05D006194 1.9e-35 152.5 110 76.4
Lj6A691T78 Lonicera japonica HOM05D005046 ORTHO05D006194 1.9e-35 152.5 112 75.0
Nn3g21734 Nelumbo nucifera HOM05D005046 ORTHO05D006194 2.5e-35 152.1 112 73.2
Lsat_1_v5_gn_1_41381 Lactuca sativa HOM05D005046 ORTHO05D006194 3.2e-35 151.8 110 75.5
Lj6g0015111 Lotus japonicus HOM05D005046 ORTHO05D006194 3.2e-35 151.8 112 73.2
Glyma.07G239500 Glycine max HOM05D005046 ORTHO05D006194 4.2e-35 151.4 112 75.0
Lalb_Chr18g0058661 Lupinus albus HOM05D005046 ORTHO05D006194 4.2e-35 151.4 112 75.0
Phvul.003G114500 Phaseolus vulgaris HOM05D005046 ORTHO05D006194 5.5e-35 151.0 112 74.1
VMungo1215G0235 Vigna mungo HOM05D005046 ORTHO05D006194 5.5e-35 151.0 112 74.1
CDE02G0992 Ceratophyllum demersum HOM05D005046 ORTHO05D006194 7.2e-35 150.6 112 75.0
CsaV3_6G028590 Cucumis sativus L. HOM05D005046 ORTHO05D006194 7.2e-35 150.6 112 74.1
MD16G1153600 Malus domestica HOM05D005046 ORTHO05D006194 7.2e-35 150.6 108 75.9
Prupe.1G116800 Prunus persica HOM05D005046 ORTHO05D006194 9.4e-35 150.2 112 75.0
Dinv44282 Davidia involucrata HOM05D005046 ORTHO05D006194 1.2e-34 149.8 112 74.1
Medtr2g034010 Medicago truncatula HOM05D005046 ORTHO05D006194 1.6e-34 149.4 112 73.2
MELO3C021266.2 Cucumis melo HOM05D005046 ORTHO05D006194 2.7e-34 148.7 112 73.2
QL05p065557 Quercus lobata HOM05D005046 ORTHO05D006194 3.6e-34 148.3 107 74.8
Sed0009015 Sechium edule HOM05D005046 ORTHO05D006194 3.6e-34 148.3 110 73.6
TPR.G13743 Trifolium pratense HOM05D005046 ORTHO05D006194 3.6e-34 148.3 112 72.3
Ca_00977_v3 Cicer arietinum L. HOM05D005046 ORTHO05D006194 6.1e-34 147.5 112 71.4
Gohir.D01G023544 Gossypium hirsutum HOM05D005046 ORTHO05D006194 6.1e-34 147.5 112 73.2
Gorai.002G030300 Gossypium raimondii HOM05D005046 ORTHO05D006194 6.1e-34 147.5 112 73.2
COL.COLO4_34610 Corchorus olitorius HOM05D005046 ORTHO05D006194 7.9e-34 147.1 112 73.2
Dinv15163 Davidia involucrata HOM05D005046 ORTHO05D006194 7.9e-34 147.1 112 72.3
arahy.Tifrunner.gnm1.ann1.4F0N5D Arachis hypogaea HOM05D005046 ORTHO05D006194 1.0e-33 146.7 112 71.4
arahy.Tifrunner.gnm1.ann1.KUZ2VC Arachis hypogaea HOM05D005046 ORTHO05D006194 1.0e-33 146.7 112 71.4
Psat1g160840 Pisum sativum HOM05D005046 ORTHO05D006194 1.0e-33 146.7 112 72.3
Manes.15G000300 Manihot esculenta HOM05D005046 ORTHO05D006194 1.8e-33 146.0 112 71.4
Duzib212G1042 Durio zibethinus HOM05D005046 ORTHO05D006194 2.3e-33 145.6 112 72.3
Gohir.A01G034600 Gossypium hirsutum HOM05D005046 ORTHO05D006194 2.3e-33 145.6 112 72.3
Phvul.006G118400 Phaseolus vulgaris HOM05D005046 ORTHO05D006194 2.3e-33 145.6 112 71.4
Potri.010G146100 Populus trichocarpa HOM05D005046 ORTHO05D006194 2.3e-33 145.6 113 73.5
VMungo0540G1157 Vigna mungo HOM05D005046 ORTHO05D006194 2.3e-33 145.6 112 71.4
Glyma.15G139900 Glycine max HOM05D005046 ORTHO05D006194 3.0e-33 145.2 112 71.4
Sabra10G0112600 Salix brachista HOM05D005046 ORTHO05D006194 3.0e-33 145.2 110 73.6
CSS0005662 Camellia sinensis var. sinensis HOM05D005046 ORTHO05D006194 3.9e-33 144.8 112 72.3
CSS0011224 Camellia sinensis var. sinensis HOM05D005046 ORTHO05D006194 3.9e-33 144.8 112 72.3
CSS0039452 Camellia sinensis var. sinensis HOM05D005046 ORTHO05D006194 3.9e-33 144.8 112 72.3
Sed0022816 Sechium edule HOM05D005046 ORTHO05D006194 3.9e-33 144.8 112 72.3
Gorai.005G067500 Gossypium raimondii HOM05D005046 ORTHO05D006194 5.1e-33 144.4 112 72.3
Actinidia14256 Actinidia chinensis HOM05D005046 ORTHO05D006194 6.7e-33 144.1 112 70.5
CANSAT78G2375 Cannabis sativa HOM05D005046 ORTHO05D006194 6.7e-33 144.1 109 71.6
Gohir.A02G054900 Gossypium hirsutum HOM05D005046 ORTHO05D006194 6.7e-33 144.1 112 72.3
TWI73G0015 Tripterygium wilfordii HOM05D005046 ORTHO05D006194 6.7e-33 144.1 112 69.6
CAN.G484.64 Capsicum annuum HOM05D005046 ORTHO05D006194 8.8e-33 143.7 112 73.2
Peaxi162Scf00228g00326 Petunia axillaris HOM05D005046 ORTHO05D006194 8.8e-33 143.7 112 74.1
SGA_v2.0_scaffold104G30073 Striga asiatica HOM05D005046 ORTHO05D006194 1.1e-32 143.3 110 70.9
vmacro08042 Vaccinium macrocarpon HOM05D005046 ORTHO05D006194 1.1e-32 143.3 109 73.4
Cfa015310 Carpinus fangiana HOM05D005046 ORTHO05D006194 1.5e-32 142.9 108 73.1
CiPaw.01G138200 Carya illinoinensis HOM05D005046 ORTHO05D006194 1.5e-32 142.9 112 71.4
Ciclev10006264m.g Citrus clementina HOM05D005046 ORTHO05D006194 1.5e-32 142.9 112 70.5
Migut.G00065 Erythranthe guttata HOM05D005046 ORTHO05D006194 1.5e-32 142.9 110 71.8
PGR004G2877 Punica granatum HOM05D005046 ORTHO05D006194 1.5e-32 142.9 108 72.2
Rhsim02G0003600 Rhododendron simsii HOM05D005046 ORTHO05D006194 1.5e-32 142.9 108 72.2
CiPaw.02G074700 Carya illinoinensis HOM05D005046 ORTHO05D006194 2.0e-32 142.5 112 69.6
Duzib052G0826 Durio zibethinus HOM05D005046 ORTHO05D006194 2.0e-32 142.5 112 71.4
Solyc12g099240.2 Solanum lycopersicum HOM05D005046 ORTHO05D006194 2.0e-32 142.5 112 71.4
Sopen12g033920 Solanum pennellii HOM05D005046 ORTHO05D006194 2.0e-32 142.5 112 71.4
PGSC0003DMG400004620 Solanum tuberosum HOM05D005046 ORTHO05D006194 2.0e-32 142.5 112 71.4
ATR0693G376 Amborella trichopoda HOM05D005046 ORTHO05D006194 2.6e-32 142.1 112 73.2
Rhsim04G0239300 Rhododendron simsii HOM05D005046 ORTHO05D006194 2.6e-32 142.1 112 70.5
FvH4_4g19820 Fragaria vesca HOM05D005046 ORTHO05D006194 5.7e-32 141.0 108 72.2
FAN07G0875 Fragaria x ananassa HOM05D005046 ORTHO05D006194 5.7e-32 141.0 108 72.2
FAN12G2964 Fragaria x ananassa HOM05D005046 ORTHO05D006194 5.7e-32 141.0 108 72.2
RcHm_v2.0_Chr4g0425361 Rosa chinensis HOM05D005046 ORTHO05D006194 5.7e-32 141.0 108 72.2
SalBow5G2652 Salvia bowleyana HOM05D005046 ORTHO05D006194 5.7e-32 141.0 110 69.1
MSTRG.24823 Avicennia marina HOM05D005046 ORTHO05D006194 7.4e-32 140.6 112 68.8
MBI18_g37558_MAGBIO Magnolia biondii HOM05D005046 ORTHO05D006194 7.4e-32 140.6 134 62.7
ClCG06G004560 Citrullus lanatus HOM05D005046 ORTHO05D006194 1.3e-31 139.8 128 64.1
MSTRG.10153 Avicennia marina HOM05D005046 ORTHO05D006194 1.7e-31 139.4 110 69.1
Glyma.09G035300 Glycine max HOM05D005046 ORTHO05D006194 2.2e-31 139.0 112 68.8
Oeu001169.1 Olea europaea HOM05D005046 ORTHO05D006194 2.2e-31 139.0 105 72.4
Actinidia18456 Actinidia chinensis HOM05D005046 ORTHO05D006194 2.8e-31 138.7 112 70.5
Actinidia40381 Actinidia chinensis HOM05D005046 ORTHO05D006194 2.8e-31 138.7 112 70.5
Eucgr.H04047 Eucalyptus grandis HOM05D005046 ORTHO05D006194 2.8e-31 138.7 112 68.8
Thecc.04G301400 Theobroma cacao HOM05D005046 ORTHO05D006194 2.8e-31 138.7 112 68.8
Pp3c15_12430 Physcomitrium patens HOM05D005046 ORTHO05D006194 6.3e-31 137.5 110 67.3
Nitab4.5_0000403g0120 Nicotiana tabacum HOM05D005046 ORTHO05D006194 1.8e-30 136.0 112 68.8
HPP92_016092 Vanilla planifolia HOM05D005046 ORTHO05D006194 2.4e-30 135.6 107 69.2
unitig_749.g13361 Utricularia gibba HOM05D005046 ORTHO05D006194 3.1e-30 135.2 106 66.0
Haze_01302 Corylus avellana HOM05D005046 ORTHO05D006194 5.3e-30 134.4 108 71.3
Thhalv10021793m.g Eutrema salsugineum HOM05D005046 ORTHO05D006194 6.9e-30 134.0 110 66.4
Sp3g05540 Schrenkiella parvula HOM05D005046 ORTHO05D006194 6.9e-30 134.0 110 65.5
Aa31LG5G17170 Aethionema arabicum HOM05D005046 ORTHO05D006194 9.1e-30 133.7 110 66.4
AT3G06610 Arabidopsis thaliana HOM05D005046 ORTHO05D006194 9.1e-30 133.7 110 66.4
CARHR081150 Cardamine hirsuta HOM05D005046 ORTHO05D006194 2.0e-29 132.5 110 65.5
Os03g0832300 Oryza sativa ssp. japonica HOM05D005046 ORTHO05D006194 2.0e-29 132.5 99 69.7
THA.LOC104805014 Tarenaya hassleriana HOM05D005046 ORTHO05D006194 2.0e-29 132.5 111 67.6
Carub.0003s0607 Capsella rubella HOM05D005046 ORTHO05D006194 2.6e-29 132.1 110 65.5
CAN.G158.24 Capsicum annuum HOM05D005046 ORTHO05D006194 3.4e-29 131.7 112 67.0
THA.LOC104818881 Tarenaya hassleriana HOM05D005046 ORTHO05D006194 3.4e-29 131.7 111 66.7
Hund11979 Selenicereus undatus HOM05D005046 ORTHO05D006194 4.5e-29 131.3 112 65.2
BNapus_Darmor_BZH_scaffold_118p00040 Brassica napus HOM05D005046 ORTHO05D006194 7.7e-29 130.6 110 63.6
Zm00001eb211320 Zea mays HOM05D005046 ORTHO05D006194 7.7e-29 130.6 99 69.7
AL3G17660 Arabidopsis lyrata HOM05D005046 ORTHO05D006194 2.2e-28 129.0 110 63.6
A05p41430 Brassica napus HOM05D005046 ORTHO05D006194 2.2e-28 129.0 110 62.7
C05p60640 Brassica napus HOM05D005046 ORTHO05D006194 2.2e-28 129.0 110 62.7
BolC5t34723H Brassica oleracea HOM05D005046 ORTHO05D006194 2.2e-28 129.0 110 62.7
BraA05t22864Z Brassica rapa HOM05D005046 ORTHO05D006194 2.2e-28 129.0 110 62.7
SMO304G0028 Selaginella moellendorffii HOM05D005046 ORTHO05D006194 3.8e-28 128.3 97 68.0
BraA01t04428Z Brassica rapa HOM05D005046 ORTHO05D006194 8.5e-28 127.1 110 61.8
Potri.008G105000 Populus trichocarpa HOM05D005046 ORTHO05D006194 8.5e-28 127.1 107 67.3
BolC1t05599H Brassica oleracea HOM05D005046 ORTHO05D006194 1.4e-27 126.3 110 61.8
BcaC05g30546 Brassica carinata HOM05D005046 ORTHO05D006194 1.9e-27 125.9 111 63.1
Ah.13g071840 Amaranthus hybridus HOM05D005046 ORTHO05D006194 4.2e-27 124.8 112 64.3
Sc25g0003240 Simmondsia chinensis HOM05D005046 ORTHO05D006194 5.5e-27 124.4 112 64.3
Sabra08G0079200 Salix brachista HOM05D005046 ORTHO05D006194 7.2e-27 124.0 113 68.1
Actinidia13356 Actinidia chinensis HOM05D005046 ORTHO05D006194 9.4e-27 123.6 100 69.0
AagrBONN_evm.TU.Sc2ySwM_368.969 Anthoceros agrestis HOM05D005046 ORTHO05D006194 2.1e-26 122.5 97 66.0
AUR62016211 Chenopodium quinoa HOM05D005046 ORTHO05D006194 2.1e-26 122.5 114 64.9
ECA240G2346 Erigeron canadensis HOM05D005046 ORTHO05D006194 2.7e-26 122.1 98 68.4
EL10Ac3g05511 Beta vulgaris HOM05D005046 ORTHO05D006194 8.0e-26 120.6 112 63.4
AUR62039277 Chenopodium quinoa HOM05D005046 ORTHO05D006194 8.0e-26 120.6 112 62.5
Nitab4.5_0000496g0080 Nicotiana tabacum HOM05D005046 ORTHO05D006194 1.8e-25 119.4 112 61.6
vmacro15180 Vaccinium macrocarpon HOM05D005046 ORTHO05D006194 3.3e-24 115.2 175 44.6
Nitab4.5_0002150g0070 Nicotiana tabacum HOM05D005046 ORTHO05D006194 1.7e-23 112.8 112 60.7
Mapoly0010s0169 Marchantia polymorpha HOM05D005046 ORTHO05D006194 6.3e-23 110.9 109 56.9
AagrBONN_evm.TU.Sc2ySwM_368.976 Anthoceros agrestis HOM05D005046 ORTHO05D006194 1.2e-21 106.7 85 64.7
Nitab4.5_0002294g0080 Nicotiana tabacum HOM05D005046 ORTHO05D006194 1.2e-21 106.7 112 58.9
CBR_g51449 Chara braunii HOM05D005046 ORTHO05D006194 2.0e-21 105.9 96 57.3
Manes.03G205301 Manihot esculenta HOM05D005046 ORTHO05D006194 5.9e-21 104.4 111 56.8
Cc03_g00760 Coffea canephora HOM05D005046 ORTHO05D006194 1.1e-19 100.1 81 69.1
Gohir.D02G059900 Gossypium hirsutum HOM05D005046 ORTHO05D006194 1.5e-19 99.8 82 69.5
BcaC09g47907 Brassica carinata HOM05D005046 ORTHO05D006194 2.0e-16 89.4 110 47.3
Atru.chr4.2994 Acer truncatum HOM05D005046 ORTHO05D006194 1.4e-14 83.2 51 82.4
Eucgr.J02724 Eucalyptus grandis HOM05D005046 ORTHO05D006194 5.3e-14 81.3 50 82.0
TAR365G1002 Trochodendron aralioides HOM05D005046 ORTHO05D006194 5.5e-11 71.2 63 61.9
DCAR_026983 Daucus carota HOM05D005046 ORTHO05D006194 4.7e-10 68.2 61 62.3
RcHm_v2.0_Chr5g0023271 Rosa chinensis HOM05D005046 ORTHO05D006194 2.3e-09 65.9 62 59.7
Lj5g0009192 Lotus japonicus HOM05D005046 ORTHO05D006194 5.2e-09 64.7 93 47.3
AL3G18870 Arabidopsis lyrata HOM05D005046 ORTHO05D006194 9.8e-08 60.5 62 54.8
Lj1g0019312 Lotus japonicus HOM05D005046 ORTHO05D006194 2.8e-07 58.9 110 39.1


User provided reference genes

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