Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 0.0e+00 1233.4 636 100.0
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 0.0e+00 1207.6 636 97.5
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 1.2e-227 793.5 638 67.6
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 1.5e-201 706.8 641 63.7
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 9.6e-201 704.1 533 68.3
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 9.9e-198 694.1 644 60.9
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 2.4e-196 689.5 647 60.4
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 4.4e-190 668.7 587 63.2
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 7.6e-190 667.9 546 66.5
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.4e-188 663.7 575 63.7
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.9e-188 663.3 541 66.0
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 7.1e-188 661.4 551 65.3
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.7e-187 659.4 595 61.5
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 2.3e-186 656.4 549 65.0
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 5.1e-186 655.2 636 59.0
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.1e-185 654.1 578 62.6
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 2.5e-185 652.9 629 59.5
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 7.4e-185 651.4 581 62.7
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 4.8e-184 648.7 667 56.7
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 8.1e-184 647.9 563 62.9
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 2.4e-183 646.4 591 61.6
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 3.1e-183 646.0 548 64.1
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 3.1e-183 646.0 577 61.5
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 2.2e-181 639.8 562 61.9
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 2.4e-180 636.3 545 63.9
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.6e-179 633.6 573 61.6
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 2.3e-178 629.8 548 61.9
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.1e-177 627.5 610 58.2
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 5.6e-177 625.2 536 62.7
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.3e-176 624.0 543 63.0
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 2.1e-176 623.2 546 63.9
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 8.1e-176 621.3 548 60.9
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.4e-175 620.5 574 60.1
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.8e-175 620.2 557 61.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 2.4e-175 619.8 643 57.5
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 4.0e-175 619.0 572 59.4
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 6.9e-175 618.2 627 56.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.5e-174 617.1 558 61.1
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.0e-174 616.7 573 59.5
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 2.6e-174 616.3 596 58.9
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 2.6e-174 616.3 575 59.3
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 3.4e-174 615.9 559 60.6
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 4.5e-174 615.5 597 59.1
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 5.8e-174 615.1 549 60.8
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.0e-173 614.4 550 61.1
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 1.3e-173 614.0 545 60.7
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 1.7e-173 613.6 586 59.6
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 1.7e-173 613.6 545 62.2
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 2.9e-173 612.8 588 58.7
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.8e-173 612.5 581 58.7
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 3.8e-173 612.5 582 58.1
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 4.9e-173 612.1 549 60.3
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 4.9e-173 612.1 548 61.9
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 6.5e-173 611.7 575 59.3
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 8.4e-173 611.3 631 55.6
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.4e-172 610.5 593 59.5
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.4e-172 610.5 590 58.8
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 1.9e-172 610.1 558 60.4
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.9e-172 610.1 574 58.5
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 4.2e-172 609.0 575 59.1
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.2e-172 609.0 593 59.4
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 4.2e-172 609.0 611 57.6
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 9.3e-172 607.8 659 55.2
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.6e-171 607.1 549 60.1
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 2.1e-171 606.7 542 61.3
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 4.6e-171 605.5 651 56.8
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 1.3e-170 604.0 569 58.2
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.9e-170 602.4 541 61.6
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.9e-169 600.1 618 57.3
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 2.1e-168 596.7 543 59.9
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 1.4e-167 594.0 548 60.6
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 2.0e-166 590.1 575 58.6
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.0e-165 587.8 588 58.0
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 4.6e-163 578.9 579 58.9
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 9.7e-161 571.2 576 57.3
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 4.1e-159 565.8 635 53.9
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 9.0e-159 564.7 551 57.7
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 6.1e-155 552.0 525 61.1
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 6.7e-154 548.5 558 57.3
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 4.1e-151 539.3 550 57.1
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 2.9e-141 506.5 470 60.4
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 5.2e-138 495.7 520 56.9
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 7.7e-134 481.9 479 57.6
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 7.2e-132 475.3 575 52.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.6e-131 474.2 546 49.5
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.7e-112 411.0 586 45.4
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 2.4e-111 407.1 437 53.8
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 5.0e-109 399.4 411 55.0
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 5.6e-108 396.0 409 57.9
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 8.0e-107 392.1 411 54.3
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 2.6e-105 387.1 373 60.6
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 9.8e-105 385.2 313 64.5
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.1e-103 379.8 423 53.4
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 3.1e-98 363.6 420 51.4
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.4e-90 338.2 375 53.3
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.5e-89 334.7 469 45.4
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 5.4e-87 326.2 609 38.4
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 3.8e-72 276.9 253 60.1
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 7.6e-57 226.1 552 32.8
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.1e-50 205.7 180 63.3
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 6.3e-35 153.3 137 59.1
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 6.3e-35 153.3 133 60.2
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.3e-32 145.6 335 31.6
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 5.5e-31 140.2 115 62.6
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.3e-29 134.8 170 45.9
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 4.4e-28 130.6 162 47.5
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 2.2e-27 128.3 97 68.0
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.1e-22 111.7 99 58.6
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 5.7e-20 103.6 81 65.4
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.8e-18 98.6 59 81.4
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 9.4e-15 86.3 59 71.2
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 1.4e-13 82.4 77 54.5
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 8.8e-13 79.7 185 31.9
MCO12G226 Micromonas commoda HOM05D006816 ORTHO05D008666 2.5e-07 61.6 365 22.5


User provided reference genes

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