Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6118 Papaver somniferum HOM05D004743 ORTHO05D005698 2.0e-74 282.3 142 100.0
PSO339G6088 Papaver somniferum HOM05D004743 ORTHO05D005698 2.3e-17 92.8 150 42.7
PSO384G3106 Papaver somniferum HOM05D004743 ORTHO05D005698 2.3e-17 92.8 150 42.7
FvH4_6g22680 Fragaria vesca HOM05D004743 ORTHO05D005698 1.5e-13 80.1 147 41.5
FAN02G0944 Fragaria x ananassa HOM05D004743 ORTHO05D005698 1.5e-13 80.1 147 41.5
FAN05G2002 Fragaria x ananassa HOM05D004743 ORTHO05D005698 1.5e-13 80.1 147 41.5
FAN09G0554 Fragaria x ananassa HOM05D004743 ORTHO05D005698 1.5e-13 80.1 147 41.5
FAN14G2026 Fragaria x ananassa HOM05D004743 ORTHO05D005698 1.5e-13 80.1 147 41.5
FAN14G4474 Fragaria x ananassa HOM05D004743 ORTHO05D005698 1.5e-13 80.1 147 41.5
Ah.13g076070 Amaranthus hybridus HOM05D004743 ORTHO05D005698 2.0e-13 79.7 140 42.9
Rhsim03G0009100 Rhododendron simsii HOM05D004743 ORTHO05D005698 1.3e-12 77.0 156 37.2
CSS0027207 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 2.8e-12 75.9 157 38.9
CSS0048559 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 2.8e-12 75.9 157 38.9
EL10Ac3g06947 Beta vulgaris HOM05D004743 ORTHO05D005698 3.7e-12 75.5 147 39.5
RcHm_v2.0_Chr3g0480261 Rosa chinensis HOM05D004743 ORTHO05D005698 3.7e-12 75.5 146 40.4
vmacro07935 Vaccinium macrocarpon HOM05D004743 ORTHO05D005698 3.7e-12 75.5 148 38.5
Ciclev10012973m.g Citrus clementina HOM05D004743 ORTHO05D005698 1.1e-11 73.9 146 39.7
TAR633G2476 Trochodendron aralioides HOM05D004743 ORTHO05D005698 1.1e-11 73.9 146 38.4
MBI04_g27127_MAGBIO Magnolia biondii HOM05D004743 ORTHO05D005698 1.4e-11 73.6 148 38.5
MD12G1061000 Malus domestica HOM05D004743 ORTHO05D005698 2.4e-11 72.8 147 36.7
Hma1.2p1_0005F.1_g004310 Hydrangea macrophylla HOM05D004743 ORTHO05D005698 3.1e-11 72.4 158 36.7
TAR623G0239 Trochodendron aralioides HOM05D004743 ORTHO05D005698 3.1e-11 72.4 146 39.0
Actinidia09383 Actinidia chinensis HOM05D000570 ORTHO05D005344 5.4e-11 71.6 159 35.8
AUR62024326 Chenopodium quinoa HOM05D004743 ORTHO05D005698 9.2e-11 70.9 147 38.1
Lju124A30G9 Lonicera japonica HOM05D004743 ORTHO05D005698 9.2e-11 70.9 157 33.1
MD14G1060700 Malus domestica HOM05D004743 ORTHO05D005698 9.2e-11 70.9 147 36.1
Prupe.7G073800 Prunus persica HOM05D004743 ORTHO05D005698 9.2e-11 70.9 147 36.7
Aqoxy2G00062 Aquilegia oxysepala HOM05D004743 ORTHO05D005698 1.2e-10 70.5 150 38.0
Cc00_g14600 Coffea canephora HOM05D004743 ORTHO05D005698 1.6e-10 70.1 150 35.3
Manes.08G045000 Manihot esculenta HOM05D004743 ORTHO05D005698 1.6e-10 70.1 146 38.4
Sed0004669 Sechium edule HOM05D004743 ORTHO05D005698 1.6e-10 70.1 146 37.0
TAR633G1605 Trochodendron aralioides HOM05D004743 ORTHO05D005698 1.6e-10 70.1 146 36.3
Manes.09G032100 Manihot esculenta HOM05D004743 ORTHO05D005698 2.0e-10 69.7 146 39.0
Hund19191 Selenicereus undatus HOM05D004743 ORTHO05D005698 2.7e-10 69.3 147 37.4
CiPaw.10G028000 Carya illinoinensis HOM05D004743 ORTHO05D005698 3.5e-10 68.9 146 37.7
Thhalv10017352m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 3.5e-10 68.9 146 35.6
Dinv14277 Davidia involucrata HOM05D004743 ORTHO05D005698 4.5e-10 68.6 157 33.1
Cc06_g22060 Coffea canephora HOM05D004743 ORTHO05D005698 5.9e-10 68.2 146 36.3
Potri.006G059300 Populus trichocarpa HOM05D004743 ORTHO05D005698 5.9e-10 68.2 146 36.3
Sed0015240 Sechium edule HOM05D004743 ORTHO05D005698 5.9e-10 68.2 157 35.0
Aa31LG1G24060 Aethionema arabicum HOM05D004743 ORTHO05D005698 7.8e-10 67.8 146 35.6
CANSAT64G2667 Cannabis sativa HOM05D004743 ORTHO05D005698 7.8e-10 67.8 146 35.6
AUR62012065 Chenopodium quinoa HOM05D004743 ORTHO05D005698 7.8e-10 67.8 147 37.4
ATR0605G135 Amborella trichopoda HOM05D004743 ORTHO05D005698 1.0e-09 67.4 146 37.0
Sp4g24390 Schrenkiella parvula HOM05D004743 ORTHO05D005698 1.0e-09 67.4 146 34.2
THA.LOC104824464 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.0e-09 67.4 146 34.2
Thhalv10006285m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 1.3e-09 67.0 146 35.6
Sp5g04820 Schrenkiella parvula HOM05D004743 ORTHO05D005698 1.3e-09 67.0 146 35.6
Sc13g0002130 Simmondsia chinensis HOM05D004743 ORTHO05D005698 1.3e-09 67.0 146 36.3
CARHR137250 Cardamine hirsuta HOM05D004743 ORTHO05D005698 1.7e-09 66.6 146 34.9
Gohir.A01G192000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 1.7e-09 66.6 147 36.7
Gorai.006G141500 Gossypium raimondii HOM05D004743 ORTHO05D005698 1.7e-09 66.6 146 37.7
Haze_19962 Corylus avellana HOM05D004743 ORTHO05D005698 2.3e-09 66.2 146 34.9
BcaB06g29229 Brassica carinata HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 34.9
BcaC02g12469 Brassica carinata HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 34.9
BcaNung04402 Brassica carinata HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 34.9
A04p32050 Brassica napus HOM05D004743 ORTHO05D005698 2.9e-09 65.9 150 34.7
A05p02780 Brassica napus HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 34.9
C04p03370 Brassica napus HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 34.9
BraA05t19270Z Brassica rapa HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 34.9
CDE07G0719 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 2.9e-09 65.9 146 37.7
Gohir.D01G178000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 2.9e-09 65.9 147 36.7
Gorai.002G225100 Gossypium raimondii HOM05D004743 ORTHO05D005698 2.9e-09 65.9 147 36.7
Oeu033746.1 Olea europaea HOM05D004743 ORTHO05D005698 2.9e-09 65.9 157 36.3
AT2G42210 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 3.8e-09 65.5 146 33.6
BcaC02g07257 Brassica carinata HOM05D004743 ORTHO05D005698 3.8e-09 65.5 146 34.9
C04p69570 Brassica napus HOM05D004743 ORTHO05D005698 3.8e-09 65.5 146 34.9
BolC4t28455H Brassica oleracea HOM05D004743 ORTHO05D005698 3.8e-09 65.5 146 34.9
CsaV3_3G039010 Cucumis sativus L. HOM05D004743 ORTHO05D005698 3.8e-09 65.5 146 37.0
COL.COLO4_36134 Corchorus olitorius HOM05D004743 ORTHO05D005698 5.0e-09 65.1 146 36.3
BraA04t18662Z Brassica rapa HOM05D004743 ORTHO05D005698 6.6e-09 64.7 150 34.0
Cpa.g.sc85.89 Carica papaya HOM05D004743 ORTHO05D005698 6.6e-09 64.7 146 37.0
Gohir.A09G126700 Gossypium hirsutum HOM05D004743 ORTHO05D005698 6.6e-09 64.7 146 37.0
DCAR_013558 Daucus carota HOM05D004743 ORTHO05D005698 8.6e-09 64.3 156 33.3
MELO3C009644.2 Cucumis melo HOM05D004743 ORTHO05D005698 1.5e-08 63.5 146 36.3
AL4G40570 Arabidopsis lyrata HOM05D004743 ORTHO05D005698 1.9e-08 63.2 146 32.9
Carub.0004s2455 Capsella rubella HOM05D004743 ORTHO05D005698 1.9e-08 63.2 146 32.9
CDE04G2796 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 1.9e-08 63.2 64 56.2
Gohir.D09G123248 Gossypium hirsutum HOM05D004743 ORTHO05D005698 1.9e-08 63.2 146 37.0
PGR142G2650 Punica granatum HOM05D004743 ORTHO05D005698 1.9e-08 63.2 146 34.9
Thecc.05G168500 Theobroma cacao HOM05D004743 ORTHO05D005698 1.9e-08 63.2 146 34.9
Duzib106G0699 Durio zibethinus HOM05D004743 ORTHO05D005698 2.5e-08 62.8 146 36.3
Solyc10g078690.3 Solanum lycopersicum HOM05D004743 ORTHO05D005698 1.6e-07 60.1 62 54.8
Sopen10g029310 Solanum pennellii HOM05D004743 ORTHO05D005698 1.6e-07 60.1 62 54.8
PGSC0003DMG400011432 Solanum tuberosum HOM05D004743 ORTHO05D005698 1.6e-07 60.1 62 54.8
Aa31LG10G12610 Aethionema arabicum HOM05D004743 ORTHO05D005698 2.1e-07 59.7 62 51.6
Ca_08506_v3 Cicer arietinum L. HOM05D004743 ORTHO05D005698 2.1e-07 59.7 150 32.0
THA.LOC104802456 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 2.1e-07 59.7 143 35.0
HanXRQChr10g0295691 Helianthus annuus HOM05D004743 ORTHO05D005698 2.8e-07 59.3 62 53.2
Phvul.001G140800 Phaseolus vulgaris HOM05D004743 ORTHO05D005698 3.6e-07 58.9 150 34.0
VMungo1383G0120 Vigna mungo HOM05D004743 ORTHO05D005698 3.6e-07 58.9 150 32.7
GSVIVG01033524001 Vitis vinifera HOM05D004743 ORTHO05D005698 4.7e-07 58.5 148 33.8
BolC4t21974H Brassica oleracea HOM05D004743 ORTHO05D005698 6.1e-07 58.2 62 50.0
HanXRQChr15g0491311 Helianthus annuus HOM05D004743 ORTHO05D005698 6.1e-07 58.2 62 53.2
Lalb_Chr04g0259631 Lupinus albus HOM05D004743 ORTHO05D005698 1.0e-06 57.4 150 32.7
Psat3g069720 Pisum sativum HOM05D004743 ORTHO05D005698 1.0e-06 57.4 147 32.7
MSTRG.19893 Avicennia marina HOM05D004743 ORTHO05D005698 1.4e-06 57.0 61 52.5
Nitab4.5_0001538g0070 Nicotiana tabacum HOM05D004743 ORTHO05D005698 2.3e-06 56.2 62 53.2
ECA247G0571 Erigeron canadensis HOM05D004743 ORTHO05D005698 3.0e-06 55.8 62 50.0
Lsat_1_v5_gn_9_28001 Lactuca sativa HOM05D004743 ORTHO05D005698 3.0e-06 55.8 62 51.6
CiPaw.09G032100 Carya illinoinensis HOM05D004743 ORTHO05D005698 4.0e-06 55.5 64 50.0
Glyma.19G145900 Glycine max HOM05D004743 ORTHO05D005698 4.0e-06 55.5 150 32.7
Nitab4.5_0000991g0030 Nicotiana tabacum HOM05D004743 ORTHO05D005698 4.0e-06 55.5 62 53.2
CAN.G1161.21 Capsicum annuum HOM05D004743 ORTHO05D005698 8.9e-06 54.3 62 50.0
Glyma.03G142900 Glycine max HOM05D004743 ORTHO05D005698 8.9e-06 54.3 150 32.7
Lj1g0027895 Lotus japonicus HOM05D004743 ORTHO05D005344 8.9e-06 54.3 66 47.0


User provided reference genes

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