Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6051 Papaver somniferum HOM05D006485 ORTHO05D006108 4.0e-112 409.8 681 100.0
PSO339G3752 Papaver somniferum HOM05D006485 ORTHO05D006108 3.6e-97 360.1 696 93.8
TAR623G0376 Trochodendron aralioides HOM05D006485 ORTHO05D006108 1.4e-16 92.4 103 52.4
Gohir.D04G106200 Gossypium hirsutum HOM05D006485 ORTHO05D006108 4.1e-16 90.9 131 47.3
Gorai.009G410100 Gossypium raimondii HOM05D006485 ORTHO05D006108 4.5e-15 87.4 138 48.6
Gohir.A04G067600 Gossypium hirsutum HOM05D006485 ORTHO05D006108 5.9e-15 87.0 131 45.8
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 3.8e-14 84.3 78 55.1
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 6.5e-14 83.6 149 39.6
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 8.6e-14 83.2 132 40.9
TWI53G1251 Tripterygium wilfordii HOM05D006485 ORTHO05D006108 8.6e-14 83.2 125 44.0
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.5e-13 82.4 118 44.9
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 1.9e-13 82.0 86 52.3
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 2.5e-13 81.6 78 56.4
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 3.2e-13 81.3 138 41.3
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 7.2e-13 80.1 149 40.9
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 9.5e-13 79.7 115 44.3
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.2e-12 79.3 82 52.4
CSS0031113 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 1.2e-12 79.3 134 39.6
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.2e-12 79.3 115 44.3
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 1.2e-12 79.3 141 43.3
Aqoxy1G01006 Aquilegia oxysepala HOM05D006485 ORTHO05D006108 1.6e-12 79.0 143 39.9
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 1.6e-12 79.0 98 48.0
Thecc.05G077700 Theobroma cacao HOM05D006485 ORTHO05D006108 2.1e-12 78.6 83 57.8
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 1.0e-11 76.3 104 46.2
A05p09230 Brassica napus HOM05D006485 ORTHO05D006108 1.4e-11 75.9 77 53.2
Eucgr.A01582 Eucalyptus grandis HOM05D006485 ORTHO05D006108 1.4e-11 75.9 95 53.7
COL.COLO4_22277 Corchorus olitorius HOM05D006485 ORTHO05D006108 1.8e-11 75.5 102 49.0
AL4G32820 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 5.2e-11 73.9 98 44.9
Potri.015G060600 Populus trichocarpa HOM05D006485 ORTHO05D006108 5.2e-11 73.9 129 38.0
Nn2g13931 Nelumbo nucifera HOM05D006485 ORTHO05D006108 1.2e-10 72.8 153 37.3
CSS0004621 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 4.4e-10 70.9 103 41.7
Thhalv10010945m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 5.7e-10 70.5 96 43.8
GSVIVG01033739001 Vitis vinifera HOM05D006485 ORTHO05D006108 5.7e-10 70.5 78 56.4
Ciclev10013512m.g Citrus clementina HOM05D006485 ORTHO05D006108 9.8e-10 69.7 90 53.3
BcaC02g09194 Brassica carinata HOM05D006485 ORTHO05D006108 1.3e-09 69.3 104 41.3
BolC4t25563H Brassica oleracea HOM05D006485 ORTHO05D006108 1.3e-09 69.3 104 41.3
A04p06430 Brassica napus HOM05D006485 ORTHO05D006108 1.7e-09 68.9 103 41.7
BraA04t16347Z Brassica rapa HOM05D006485 ORTHO05D006108 1.7e-09 68.9 103 41.7
Nitab4.5_0006314g0010 Nicotiana tabacum HOM05D006485 ORTHO05D006108 2.2e-09 68.6 92 45.7
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 3.7e-09 67.8 98 51.0
RcHm_v2.0_Chr3g0471651 Rosa chinensis HOM05D006485 ORTHO05D006108 4.9e-09 67.4 162 35.8
Sp5g09280 Schrenkiella parvula HOM05D006485 ORTHO05D006108 4.9e-09 67.4 91 48.4
AL5G33870 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 6.3e-09 67.0 97 42.3
BcaB02g08540 Brassica carinata HOM05D006485 ORTHO05D006108 8.3e-09 66.6 96 42.7
C04p39920 Brassica napus HOM05D006485 ORTHO05D006108 8.3e-09 66.6 96 43.8
CAN.G824.55 Capsicum annuum HOM05D006485 ORTHO05D006108 8.3e-09 66.6 77 51.9
Lj3C1005T3 Lonicera japonica HOM05D011389 ORTHO05D006108 8.3e-09 66.6 117 39.3
Atru.chr8.1686 Acer truncatum HOM05D006485 ORTHO05D006108 1.1e-08 66.2 71 54.9
Carub.0005s1954 Capsella rubella HOM05D006485 ORTHO05D006108 1.1e-08 66.2 99 41.4
Hund12313 Selenicereus undatus HOM05D006485 ORTHO05D006108 1.1e-08 66.2 87 46.0
Sc02g0001270 Simmondsia chinensis HOM05D006485 ORTHO05D006108 1.4e-08 65.9 108 41.7
Cfa020727 Carpinus fangiana HOM05D006485 ORTHO05D006108 2.4e-08 65.1 72 52.8
Gohir.D09G139000 Gossypium hirsutum HOM05D006485 ORTHO05D006108 2.4e-08 65.1 157 37.6
PGSC0003DMG400002731 Solanum tuberosum HOM05D006485 ORTHO05D006108 2.4e-08 65.1 92 48.9
Gorai.006G159500 Gossypium raimondii HOM05D006485 ORTHO05D006108 4.1e-08 64.3 157 37.6
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 5.4e-08 63.9 81 48.1
MELO3C009418.2 Cucumis melo HOM05D006485 ORTHO05D006108 5.4e-08 63.9 121 38.8
Prupe.7G121500 Prunus persica HOM05D006485 ORTHO05D006108 5.4e-08 63.9 98 46.9
Cfa016504 Carpinus fangiana HOM05D006485 ORTHO05D006108 7.0e-08 63.5 72 51.4
EL10Ac7g16753 Beta vulgaris HOM05D006485 ORTHO05D006108 1.2e-07 62.8 95 42.1
SalBow5G2944 Salvia bowleyana HOM05D006485 ORTHO05D006108 1.2e-07 62.8 124 36.3
CARHR162930 Cardamine hirsuta HOM05D006485 ORTHO05D006108 1.6e-07 62.4 103 40.8
Gohir.A09G142800 Gossypium hirsutum HOM05D006485 ORTHO05D006108 1.6e-07 62.4 160 36.2
Manes.08G018000 Manihot esculenta HOM05D006485 ORTHO05D006108 2.0e-07 62.0 106 42.5
QL07p041110 Quercus lobata HOM05D006485 ORTHO05D006108 2.0e-07 62.0 79 51.9
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 3.5e-07 61.2 99 44.4
PSO675G5542 Papaver somniferum HOM05D006485 ORTHO05D006108 3.5e-07 61.2 89 48.3
Haze_19505 Corylus avellana HOM05D006485 ORTHO05D006108 4.5e-07 60.8 72 50.0
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 1.3e-06 59.3 89 47.2
ClCG10G019560 Citrullus lanatus HOM05D006485 ORTHO05D006108 1.7e-06 58.9 99 43.4
CsaV3_3G036640 Cucumis sativus L. HOM05D006485 ORTHO05D006108 2.3e-06 58.5 92 43.5
Migut.L01738 Erythranthe guttata HOM05D013674 ORTHO05D006108 2.9e-06 58.2 127 35.4
Solyc09g008770.3 Solanum lycopersicum HOM05D006485 ORTHO05D006108 3.8e-06 57.8 105 38.1
Glyma.10G064400 Glycine max HOM05D013674 ORTHO05D006108 8.6e-06 56.6 89 46.1


User provided reference genes

Program Settings