Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 8.4e-65 250.4 141 100.0
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.0e-62 243.4 141 97.9
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 6.0e-39 164.5 152 65.8
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.8e-36 155.6 139 70.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.8e-35 152.9 159 62.9
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.8e-35 152.9 159 62.9
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.9e-35 151.0 132 72.0
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 6.9e-35 151.0 114 77.2
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.0e-35 150.6 131 71.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 9.0e-35 150.6 154 64.9
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.0e-34 149.4 155 65.8
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 4.5e-34 148.3 114 78.9
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 4.5e-34 148.3 114 80.7
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 5.9e-34 147.9 124 75.0
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.9e-34 147.9 121 72.7
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.3e-33 146.7 118 77.1
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.7e-33 146.4 104 80.8
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.7e-33 146.4 140 69.3
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 2.2e-33 146.0 127 71.7
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 6.5e-33 144.4 124 70.2
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 6.5e-33 144.4 156 62.2
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 8.5e-33 144.1 111 79.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.1e-32 143.7 147 63.3
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.4e-32 143.3 105 81.9
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.4e-32 143.3 119 75.6
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.4e-32 143.3 145 64.1
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.9e-32 142.9 149 59.1
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.2e-32 141.7 149 61.7
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 5.5e-32 141.4 109 78.9
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.6e-31 139.8 139 64.0
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.6e-31 139.8 145 64.8
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 2.1e-31 139.4 102 83.3
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.1e-31 139.4 115 73.0
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.1e-31 139.4 155 60.6
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.1e-31 139.4 115 74.8
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 2.7e-31 139.0 154 61.0
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.6e-31 138.7 120 71.7
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 3.6e-31 138.7 137 64.2
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 3.6e-31 138.7 124 65.3
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 4.6e-31 138.3 122 71.3
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 4.6e-31 138.3 147 61.9
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 6.1e-31 137.9 109 75.2
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 7.9e-31 137.5 144 63.2
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.0e-30 137.1 147 62.6
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.0e-30 137.1 116 72.4
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.0e-30 137.1 103 80.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.0e-30 137.1 150 63.3
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.3e-30 136.7 147 62.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.3e-30 136.7 105 77.1
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.3e-30 136.7 103 80.6
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.3e-30 136.7 109 75.2
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.8e-30 136.3 109 74.3
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.8e-30 136.3 118 74.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 3.0e-30 135.6 147 61.9
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 3.0e-30 135.6 147 61.9
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 3.0e-30 135.6 147 61.9
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 3.0e-30 135.6 147 61.9
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 3.9e-30 135.2 103 81.6
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 3.9e-30 135.2 105 77.1
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 5.1e-30 134.8 122 71.3
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 5.1e-30 134.8 103 78.6
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 8.7e-30 134.0 116 73.3
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.5e-29 133.3 153 46.4
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.5e-29 133.3 128 61.7
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.9e-29 132.9 147 61.2
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.3e-29 132.1 145 59.3
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 5.7e-29 131.3 105 74.3
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 5.7e-29 131.3 122 68.9
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 7.4e-29 131.0 103 77.7
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 7.4e-29 131.0 101 80.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 7.4e-29 131.0 110 73.6
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.3e-28 130.2 139 65.5
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.6e-28 129.8 105 77.1
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 2.2e-28 129.4 126 67.5
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 2.2e-28 129.4 149 58.4
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 2.8e-28 129.0 108 73.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.8e-28 129.0 119 72.3
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 4.8e-28 128.3 105 75.2
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.8e-28 128.3 155 57.4
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 6.3e-28 127.9 101 78.2
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 6.3e-28 127.9 139 59.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.2e-28 127.5 101 74.3
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 8.2e-28 127.5 120 70.8
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 8.2e-28 127.5 102 78.4
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.4e-27 126.7 105 76.2
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.4e-27 126.7 103 73.8
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 2.4e-27 125.9 103 74.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 2.4e-27 125.9 125 61.6
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 5.3e-27 124.8 103 70.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 6.9e-27 124.4 105 70.5
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 7.7e-26 120.9 76 69.7
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.7e-25 119.8 100 76.0
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.9e-24 116.3 106 69.8
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 3.2e-24 115.5 161 54.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 4.2e-24 115.2 96 78.1
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.2e-24 115.2 80 87.5
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 7.2e-24 114.4 81 65.4
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 3.6e-23 112.1 108 65.7
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.5e-21 106.7 137 55.5
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 1.3e-20 103.6 108 63.9
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.8e-20 102.4 76 81.6
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 4.8e-20 101.7 106 63.2
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.4e-19 100.1 83 71.1
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.8e-19 99.8 72 80.6
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.6e-10 69.3 52 65.4
Cre01.g045650 Chlamydomonas reinhardtii HOM05D007253 ORTHO05D009055 8.8e-06 54.3 82 51.2


User provided reference genes

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