Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 2107.8 1077 100.0
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 2058.5 1076 98.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1610.1 1078 76.5
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1558.1 1080 73.1
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1552.7 1085 71.5
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1548.9 1081 71.8
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1547.7 1077 72.1
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1546.6 1091 71.2
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1541.9 1076 73.0
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1536.2 1079 73.3
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1532.3 1077 72.1
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1532.3 1078 73.2
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1529.2 1088 72.7
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1524.6 1085 71.7
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1520.0 1084 72.1
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1518.4 1081 70.8
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1513.0 1077 70.6
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1512.3 1075 72.2
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1511.1 1074 71.4
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1510.7 1075 70.9
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1509.2 1109 69.8
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1509.2 1082 71.3
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1508.4 1078 70.1
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1507.7 1077 70.6
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1504.2 1078 69.5
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1497.3 1078 70.2
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1496.5 1077 70.4
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 1075 71.3
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1494.2 1093 70.5
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1493.4 1065 73.0
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1493.0 1075 71.2
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1489.9 1075 70.3
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1489.2 1077 71.1
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1488.4 1078 70.1
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1484.9 1102 68.9
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1484.2 1075 71.5
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1484.2 1077 70.0
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1481.5 1075 69.4
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1480.3 1073 71.2
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1480.3 1077 71.0
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1480.3 1076 71.0
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1479.9 1078 69.3
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1475.3 1077 69.3
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1472.2 1077 69.5
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1471.1 1083 69.7
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1468.8 1083 70.1
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1466.8 1082 68.3
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1466.4 1067 69.4
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1464.5 1080 69.5
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1464.5 1077 71.5
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1463.7 1078 69.1
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1463.7 1072 69.7
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1462.2 1081 69.6
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1461.4 1076 68.8
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1459.5 1068 69.4
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1458.7 1075 69.6
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1457.2 1078 69.2
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1451.0 1068 69.0
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1449.5 1074 68.8
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1449.1 1068 68.8
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1447.6 1109 67.3
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1447.6 1068 68.8
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1447.2 1076 69.1
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1446.4 1082 67.6
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1442.2 1073 67.6
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1441.0 1074 68.4
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1437.6 1076 68.9
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1436.8 1077 68.4
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1436.0 1076 67.9
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1434.9 1080 67.7
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1432.9 1074 67.8
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1429.1 1079 68.5
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1424.8 1077 68.9
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1419.1 1081 68.2
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1418.7 1072 68.0
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1412.1 1070 68.8
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1409.0 1070 68.1
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1395.9 1087 67.8
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1392.1 1069 68.6
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1385.5 1077 68.2
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1382.9 1071 66.9
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1377.5 987 72.4
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1367.8 1077 65.2
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1343.2 1202 60.1
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1326.2 942 71.0
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1315.1 1082 64.9
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1314.7 1073 62.7
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1304.3 1129 61.7
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1275.8 1078 60.5
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1272.3 940 69.4
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1231.1 1193 56.5
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1142.9 1069 55.3
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1117.4 966 63.3
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1091.3 1083 57.6
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1088.2 763 70.2
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 6.8e-308 1060.8 761 69.4
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 4.9e-298 1028.1 759 68.4
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.1e-286 990.3 723 71.0
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 3.8e-282 975.3 1088 48.3
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 3.0e-271 939.1 1086 48.1
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.2e-249 865.9 1016 52.3
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 6.5e-242 841.6 717 62.1
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 5.7e-238 828.6 614 68.4
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 1.6e-227 793.9 1020 44.1
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 5.7e-214 748.8 536 71.5
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 3.9e-186 656.4 507 64.9
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 1.5e-185 654.4 1505 33.4
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 1.6e-176 624.4 653 53.8
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 7.4e-153 545.8 402 70.1
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.8e-127 461.5 336 70.5
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.8e-82 312.0 194 77.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 1.5e-49 202.6 143 71.3
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.3e-35 156.4 99 76.8
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.1e-23 116.7 59 88.1
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 9.7e-20 103.6 54 85.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 5.5e-15 87.8 65 58.5
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 3.4e-09 68.6 533 20.8
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 4.5e-09 68.2 95 41.1
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 4.5e-09 68.2 95 41.1
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 9.4e-07 60.5 92 39.1


User provided reference genes

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