Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5967 Papaver somniferum HOM05D007665 ORTHO05D008293 7.6e-159 563.9 313 100.0
PSO170G3678 Papaver somniferum HOM05D007665 ORTHO05D008293 1.8e-107 393.3 249 90.4
Aqoxy7G02985 Aquilegia oxysepala HOM05D007665 ORTHO05D008293 3.7e-36 156.4 278 45.0
MBI16_g38083_MAGBIO Magnolia biondii HOM05D007665 ORTHO05D008293 7.4e-29 132.1 330 34.2
TAR625G0485 Trochodendron aralioides HOM05D007665 ORTHO05D008293 1.7e-25 120.9 334 35.0
QL11p005089 Quercus lobata HOM05D007665 ORTHO05D008293 2.2e-17 94.0 328 32.0
Dinv19563 Davidia involucrata HOM05D007665 ORTHO05D008293 3.8e-17 93.2 319 31.7
Potri.018G090000 Populus trichocarpa HOM05D007665 ORTHO05D008293 3.8e-17 93.2 330 31.2
Duzib150G0483 Durio zibethinus HOM05D007665 ORTHO05D008293 1.0e-14 85.1 321 29.0
CiPaw.07G194500 Carya illinoinensis HOM05D007665 ORTHO05D008293 1.8e-14 84.3 325 32.0
Thecc.09G178300 Theobroma cacao HOM05D007665 ORTHO05D008293 8.8e-14 82.0 319 27.9
TWI34G1272 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 1.3e-12 78.2 329 28.9
COL.COLO4_35626 Corchorus olitorius HOM05D007665 ORTHO05D008293 1.7e-12 77.8 331 28.1
Sabra06G0127300 Salix brachista HOM05D007665 ORTHO05D008293 1.7e-12 77.8 328 29.3
Gohir.D08G093300 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.7e-12 76.6 269 31.6
Prupe.1G081700 Prunus persica HOM05D007665 ORTHO05D008293 8.2e-12 75.5 318 31.8
ATR0580G179 Amborella trichopoda HOM05D007665 ORTHO05D008293 1.4e-11 74.7 273 29.7
Cfa013407 Carpinus fangiana HOM05D007665 ORTHO05D008293 1.8e-11 74.3 327 30.9
CiPaw.08G034700 Carya illinoinensis HOM05D007665 ORTHO05D008293 3.1e-11 73.6 321 29.3
Gohir.A08G083600 Gossypium hirsutum HOM05D007665 ORTHO05D008293 5.3e-11 72.8 266 30.1
Sed0009659 Sechium edule HOM05D007665 ORTHO05D008293 1.5e-10 71.2 273 28.9
MD13G1247000 Malus domestica HOM05D007665 ORTHO05D008293 2.0e-10 70.9 267 37.8
Cpa.g.c26900 Carica papaya HOM05D007665 ORTHO05D008293 2.6e-10 70.5 345 28.4
Gorai.004G098900 Gossypium raimondii HOM05D007665 ORTHO05D008293 4.5e-10 69.7 265 30.6
Glyma.15G163200 Glycine max HOM05D007665 ORTHO05D008293 7.7e-10 68.9 331 29.0
Sabra18G0077500 Salix brachista HOM05D007665 ORTHO05D008293 7.7e-10 68.9 336 27.1
Glyma.09G056900 Glycine max HOM05D007665 ORTHO05D008293 1.0e-09 68.6 330 29.1
FAN07G1410 Fragaria x ananassa HOM05D007665 ORTHO05D008293 1.7e-09 67.8 230 27.0
Lj6g0002099 Lotus japonicus HOM05D007665 ORTHO05D008293 2.9e-09 67.0 321 28.7
FvH4_4g07760 Fragaria vesca HOM05D007665 ORTHO05D008293 5.0e-09 66.2 320 25.3
FAN12G1950 Fragaria x ananassa HOM05D007665 ORTHO05D008293 5.0e-09 66.2 320 25.3
ClCG06G013480 Citrullus lanatus HOM05D007665 ORTHO05D008293 6.5e-09 65.9 286 30.1
RcHm_v2.0_Chr4g0400841 Rosa chinensis HOM05D007665 ORTHO05D008293 1.1e-08 65.1 235 29.8
Potri.006G165500 Populus trichocarpa HOM05D007665 ORTHO05D008293 1.4e-08 64.7 226 28.8
Haze_21953 Corylus avellana HOM05D007665 ORTHO05D008293 2.5e-08 63.9 232 32.8
FAN17G2593 Fragaria x ananassa HOM05D007665 ORTHO05D008293 3.2e-08 63.5 316 24.7
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 5.5e-08 62.8 141 38.3
Gohir.D10G098000 Gossypium hirsutum HOM05D004032 ORTHO05D004462 5.5e-08 62.8 63 57.1
Gorai.011G107600 Gossypium raimondii HOM05D004032 ORTHO05D004462 9.4e-08 62.0 63 57.1
MELO3C017449.2 Cucumis melo HOM05D007665 ORTHO05D008293 1.2e-07 61.6 284 30.6
FAN22G0501 Fragaria x ananassa HOM05D007665 ORTHO05D008293 1.2e-07 61.6 230 26.1
MD16G1253900 Malus domestica HOM05D007665 ORTHO05D008293 1.2e-07 61.6 319 29.2
CANSAT11G1651 Cannabis sativa HOM05D007665 ORTHO05D008293 1.6e-07 61.2 320 29.1
VMungo1215G3214 Vigna mungo HOM05D007665 ORTHO05D008293 2.1e-07 60.8 231 28.6
VMungo1309G2535 Vigna mungo HOM05D007665 ORTHO05D008293 2.1e-07 60.8 330 30.9
Duzib187G1312 Durio zibethinus HOM05D004032 ORTHO05D004462 3.6e-07 60.1 59 57.6
Medtr2g036740 Medicago truncatula HOM05D007665 ORTHO05D008293 4.7e-07 59.7 218 29.8
PSO541G5875 Papaver somniferum HOM05D004032 ORTHO05D004462 6.1e-07 59.3 54 53.7
Thecc.01G069300 Theobroma cacao HOM05D004032 ORTHO05D004462 6.1e-07 59.3 52 59.6
Duzib147G0949 Durio zibethinus HOM05D001536 ORTHO05D001442 7.9e-07 58.9 188 29.3
Phvul.003G143500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 7.9e-07 58.9 230 30.9
GSVIVG01029234001 Vitis vinifera HOM05D007665 ORTHO05D008293 7.9e-07 58.9 142 35.2
PSO675G6353 Papaver somniferum HOM05D004032 ORTHO05D004462 1.0e-06 58.5 54 53.7
Atru.chr7.835 Acer truncatum HOM05D007665 ORTHO05D008293 1.4e-06 58.2 327 26.9
Manes.13G113400 Manihot esculenta HOM05D004032 ORTHO05D004462 1.4e-06 58.2 50 62.0
QL06p039858 Quercus lobata HOM05D004032 ORTHO05D004462 1.4e-06 58.2 55 52.7
Thecc.04G089400 Theobroma cacao HOM05D001536 ORTHO05D001442 1.4e-06 58.2 187 30.5
Hma1.2p1_1303F.1_g274400 Hydrangea macrophylla HOM05D007665 ORTHO05D008293 1.8e-06 57.8 194 32.0
SalBow6G2131 Salvia bowleyana HOM05D004032 ORTHO05D004462 1.8e-06 57.8 62 50.0
TAR376G0432 Trochodendron aralioides HOM05D004032 ORTHO05D004462 1.8e-06 57.8 46 63.0
CDE05G1157 Ceratophyllum demersum HOM05D007665 ORTHO05D008293 2.3e-06 57.4 269 25.7
Ciclev10026503m.g Citrus clementina HOM05D004032 ORTHO05D004462 2.3e-06 57.4 55 54.5
ECA232G3054 Erigeron canadensis HOM05D004032 ORTHO05D004462 2.3e-06 57.4 56 50.0
Gohir.A02G153200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.3e-06 57.4 50 60.0
Gohir.A10G090100 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.3e-06 57.4 63 54.0
Gohir.D03G027200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.3e-06 57.4 50 60.0
Gohir.D11G206500 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.3e-06 57.4 53 56.6
Gorai.003G028900 Gossypium raimondii HOM05D004032 ORTHO05D004462 2.3e-06 57.4 50 60.0
Gorai.007G221700 Gossypium raimondii HOM05D004032 ORTHO05D004462 2.3e-06 57.4 53 56.6
CsaV3_1G031740 Cucumis sativus L. HOM05D007665 ORTHO05D008293 3.0e-06 57.0 276 29.3
Sed0022630 Sechium edule HOM05D004032 ORTHO05D004462 3.0e-06 57.0 64 46.9
Cc07_g06860 Coffea canephora HOM05D004032 ORTHO05D004462 3.9e-06 56.6 57 49.1
HanXRQChr11g0322451 Helianthus annuus HOM05D004032 ORTHO05D004462 3.9e-06 56.6 139 31.7
Aa31LG1G15950 Aethionema arabicum HOM05D004032 ORTHO05D004462 5.1e-06 56.2 59 52.5
MSTRG.2833 Avicennia marina HOM05D004032 ORTHO05D004462 5.1e-06 56.2 65 49.2
CSS0031607 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 5.1e-06 56.2 82 43.9
CARHR280210 Cardamine hirsuta HOM05D004032 ORTHO05D004462 5.1e-06 56.2 71 47.9
COL.COLO4_11544 Corchorus olitorius HOM05D004032 ORTHO05D004462 5.1e-06 56.2 70 48.6
DCAR_010831 Daucus carota HOM05D004032 ORTHO05D004462 5.1e-06 56.2 55 52.7
HPP92_001620 Vanilla planifolia HOM05D001536 ORTHO05D001442 5.1e-06 56.2 167 33.5
CSS0002661 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 6.7e-06 55.8 82 43.9
Nitab4.5_0000868g0010 Nicotiana tabacum HOM05D004032 ORTHO05D004462 6.7e-06 55.8 261 28.0
Sc04g0007760 Simmondsia chinensis HOM05D001536 ORTHO05D001442 6.7e-06 55.8 157 32.5
THA.LOC104827558 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 6.7e-06 55.8 56 53.6
ClCG01G017390 Citrullus lanatus HOM05D004032 ORTHO05D004462 8.8e-06 55.5 64 46.9
Lj4g0023476 Lotus japonicus HOM05D007665 ORTHO05D008293 8.8e-06 55.5 142 35.2
Manes.12G111200 Manihot esculenta HOM05D004032 ORTHO05D004462 8.8e-06 55.5 268 25.7
Oeu013283.1 Olea europaea HOM05D004032 ORTHO05D004462 8.8e-06 55.5 49 59.2
Os03g0762100 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 8.8e-06 55.5 60 45.0
PGR004G0357 Punica granatum HOM05D004032 ORTHO05D004462 8.8e-06 55.5 42 64.3
RcHm_v2.0_Chr2g0107481 Rosa chinensis HOM05D004032 ORTHO05D004462 8.8e-06 55.5 70 45.7
SGA_v2.0_scaffold66G22424 Striga asiatica HOM05D050165 ORTHO05D008293 8.8e-06 55.5 145 37.2
GSVIVG01000145001 Vitis vinifera HOM05D004032 ORTHO05D004462 8.8e-06 55.5 76 42.1


User provided reference genes

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