Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.1e-213 746.5 429 100.0
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 4.9e-193 677.9 429 92.5
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.6e-71 274.2 382 50.3
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 3.1e-70 270.0 383 51.7
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.5e-64 251.1 269 52.4
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.0e-64 250.8 359 50.7
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.0e-64 250.8 369 49.1
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 7.4e-64 248.8 284 51.4
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 9.7e-64 248.4 327 47.1
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.7e-63 247.7 290 47.6
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 8.2e-63 245.4 366 49.7
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.6e-61 240.4 235 53.2
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.6e-61 240.4 401 47.4
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 3.4e-61 240.0 390 47.9
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 4.5e-61 239.6 393 45.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 5.9e-61 239.2 307 48.5
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.0e-60 238.4 361 48.2
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.7e-60 237.7 324 43.2
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.9e-60 236.9 324 46.9
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.8e-60 236.5 325 47.1
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 3.8e-60 236.5 319 46.7
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.4e-59 234.6 272 49.3
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.9e-59 234.2 361 49.9
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 3.2e-59 233.4 396 43.4
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 4.2e-59 233.0 265 51.7
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 9.4e-59 231.9 320 46.6
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.2e-58 231.5 252 52.0
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 2.7e-58 230.3 387 47.3
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 2.3e-57 227.3 396 44.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.3e-57 227.3 342 51.5
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 3.0e-57 226.9 223 54.3
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.5e-56 224.6 368 44.6
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.5e-56 224.6 274 47.1
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 2.0e-56 224.2 321 45.8
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.6e-56 223.8 325 42.8
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 7.4e-56 222.2 362 48.1
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 9.7e-56 221.9 222 54.5
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 8.2e-55 218.8 482 39.4
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.4e-54 217.2 247 52.2
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 3.1e-54 216.9 225 50.7
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 3.1e-54 216.9 237 51.9
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 7.0e-54 215.7 346 48.8
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.5e-53 214.5 378 47.6
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.5e-53 214.5 256 49.2
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 3.5e-53 213.4 302 45.4
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 7.7e-53 212.2 376 45.2
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.0e-52 211.8 245 48.6
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.7e-52 211.1 393 43.3
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.7e-52 211.1 218 53.2
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 3.8e-52 209.9 251 45.8
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.8e-52 209.9 245 48.2
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 5.0e-52 209.5 318 44.3
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 5.0e-52 209.5 268 46.3
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 4.2e-51 206.5 312 43.6
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 5.5e-51 206.1 375 45.9
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 7.2e-51 205.7 218 50.0
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.2e-50 204.9 322 41.9
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.1e-50 204.1 234 49.1
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 2.1e-50 204.1 402 43.5
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.7e-50 203.8 315 41.3
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 6.1e-50 202.6 364 47.3
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 8.0e-50 202.2 261 47.9
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 8.0e-50 202.2 200 53.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 8.0e-50 202.2 254 48.4
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.4e-49 201.4 266 47.7
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.4e-49 201.4 239 49.4
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 3.0e-49 200.3 322 42.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 3.0e-49 200.3 413 42.9
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.7e-49 199.1 351 45.6
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 6.7e-49 199.1 199 53.3
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 9.7e-48 195.3 365 42.7
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 9.7e-48 195.3 343 46.1
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.7e-47 194.5 197 54.3
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 4.8e-47 193.0 314 40.4
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 4.8e-47 193.0 247 45.7
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.1e-46 191.8 315 40.6
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.4e-46 190.7 315 40.6
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.4e-46 190.7 250 46.0
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 4.1e-46 189.9 260 45.4
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 7.0e-46 189.1 257 45.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 9.1e-46 188.7 214 48.1
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.6e-45 188.0 262 47.7
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 1.6e-45 188.0 250 45.2
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.0e-45 187.6 182 55.5
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.0e-45 187.6 321 43.3
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.6e-45 187.2 249 46.6
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 3.5e-45 186.8 320 38.8
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 3.5e-45 186.8 320 38.8
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 5.9e-45 186.0 236 45.3
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-44 184.9 272 44.1
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.3e-44 184.9 232 46.1
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.5e-43 181.4 358 43.9
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.5e-43 181.4 196 51.0
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 4.2e-43 179.9 269 43.5
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 4.2e-43 179.9 236 41.5
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.2e-42 178.3 301 42.2
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.4e-41 174.9 202 48.0
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 6.8e-41 172.6 189 49.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.6e-40 170.6 335 43.3
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.7e-39 166.8 222 43.2
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 8.3e-39 165.6 312 34.9
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 3.1e-38 163.7 234 43.2
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.6e-37 161.4 185 48.6
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 7.7e-37 159.1 211 45.0
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.2e-34 151.8 167 47.9
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 4.7e-34 149.8 217 41.9
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 6.1e-34 149.4 200 42.5
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 5.4e-30 136.3 226 37.6
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 9.1e-30 135.6 197 39.6
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 3.0e-25 120.6 356 38.8
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 9.2e-22 109.0 151 44.4
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 2.3e-20 104.4 164 39.6
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.9e-20 104.0 263 32.3
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 3.2e-14 84.0 85 54.1
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 5.0e-12 76.6 77 53.2


User provided reference genes

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