Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 3.6e-109 398.3 206 100.0
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 3.6e-109 398.3 206 100.0
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 3.6e-109 398.3 206 100.0
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 9.9e-91 337.0 206 86.4
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 4.8e-85 318.2 206 83.0
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 9.7e-78 293.9 206 77.2
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 6.7e-71 271.2 149 90.6
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 8.8e-63 244.2 160 81.2
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 2.1e-56 223.0 194 62.9
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 7.9e-56 221.1 196 61.2
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 3.0e-55 219.2 198 59.6
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 2.0e-54 216.5 189 60.8
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 4.4e-54 215.3 197 58.9
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 7.4e-54 214.5 198 61.6
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 9.7e-54 214.2 195 60.5
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 1.7e-53 213.4 196 58.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 2.2e-53 213.0 159 69.2
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 6.3e-53 211.5 197 58.4
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 1.4e-52 210.3 193 61.7
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 2.4e-52 209.5 181 61.9
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.4e-52 209.5 195 60.5
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 4.1e-52 208.8 187 58.8
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 7.0e-52 208.0 166 66.3
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 9.1e-52 207.6 165 66.7
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 2.6e-51 206.1 201 58.2
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 3.5e-51 205.7 187 59.9
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 5.9e-51 204.9 173 65.3
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 1.0e-50 204.1 196 59.2
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 1.3e-50 203.8 193 57.5
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 6.5e-50 201.4 197 58.4
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 8.5e-50 201.1 186 60.8
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 1.1e-49 200.7 196 55.1
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 4.2e-49 198.7 192 58.3
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 1.6e-48 196.8 196 56.1
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 1.6e-48 196.8 193 58.0
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.0e-47 194.1 192 55.7
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.0e-47 194.1 192 55.7
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 1.4e-47 193.7 162 59.3
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 1.4e-47 193.7 179 58.7
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 1.4e-47 193.7 190 56.3
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 1.8e-47 193.4 167 61.7
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.8e-47 193.4 183 57.9
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 3.0e-47 192.6 158 61.4
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 3.0e-47 192.6 165 66.1
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 5.2e-47 191.8 173 59.5
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 6.7e-47 191.4 164 62.2
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 8.8e-47 191.0 165 65.5
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.2e-46 190.7 197 56.9
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 1.5e-46 190.3 192 54.7
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.5e-46 190.3 164 60.4
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.5e-46 190.3 186 53.8
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 2.0e-46 189.9 199 54.8
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 2.6e-46 189.5 188 55.9
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 4.4e-46 188.7 190 56.8
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 9.7e-46 187.6 184 54.9
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 9.7e-46 187.6 175 58.9
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 2.2e-45 186.4 187 57.8
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 4.8e-45 185.3 189 56.6
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 6.3e-45 184.9 163 62.0
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 8.2e-45 184.5 188 53.7
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 1.1e-44 184.1 170 57.6
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 1.8e-44 183.3 196 52.0
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 4.1e-44 182.2 146 63.7
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 5.3e-44 181.8 196 53.6
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 7.0e-44 181.4 276 42.0
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 9.1e-44 181.0 165 59.4
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.6e-43 180.3 156 60.3
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 1.6e-43 180.3 189 54.5
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 1.6e-43 180.3 155 62.6
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 2.7e-43 179.5 184 53.8
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 3.5e-43 179.1 166 59.6
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 4.5e-43 178.7 155 60.0
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 7.7e-43 177.9 158 63.9
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.3e-42 177.2 164 59.1
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 1.7e-42 176.8 177 56.5
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 2.9e-42 176.0 189 51.9
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.5e-41 173.7 177 54.2
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 2.5e-41 172.9 159 57.9
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 3.2e-41 172.6 168 55.4
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 5.5e-41 171.8 146 62.3
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 5.5e-41 171.8 196 52.0
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 9.4e-41 171.0 167 56.9
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 2.1e-40 169.9 162 57.4
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 2.7e-40 169.5 147 62.6
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 2.7e-40 169.5 177 52.5
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 2.7e-40 169.5 163 55.8
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 3.6e-40 169.1 192 51.0
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 6.1e-40 168.3 171 55.6
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 2.3e-39 166.4 171 53.2
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 3.0e-39 166.0 178 52.2
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 3.0e-39 166.0 187 50.8
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 4.0e-39 165.6 168 53.0
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 4.0e-39 165.6 162 54.3
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 5.2e-39 165.2 187 52.4
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 6.8e-39 164.9 186 49.5
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 8.8e-39 164.5 142 62.0
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 3.4e-38 162.5 162 53.7
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 9.8e-38 161.0 145 57.2
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 4.8e-37 158.7 187 47.6
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 9.1e-36 154.5 198 48.0
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 1.1e-33 147.5 158 53.2
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 1.2e-32 144.1 154 51.9
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 2.3e-31 139.8 131 56.5
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 1.3e-29 134.0 120 60.0
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 1.7e-29 133.7 129 54.3
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 6.3e-29 131.7 127 54.3
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 1.1e-28 131.0 112 65.2
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 1.4e-28 130.6 168 47.0
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.8e-28 130.2 202 43.1
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 1.8e-28 130.2 127 54.3
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 2.4e-28 129.8 166 46.4
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 5.4e-28 128.6 182 44.0
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 1.6e-27 127.1 124 58.9
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 5.9e-27 125.2 120 58.3
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 1.7e-26 123.6 177 42.9
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 1.7e-26 123.6 177 42.9
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 2.3e-26 123.2 139 54.7
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 1.1e-25 120.9 109 62.4
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 4.3e-25 119.0 112 58.0
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 4.3e-25 119.0 164 42.1
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 4.3e-25 119.0 140 49.3
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 3.4e-22 109.4 145 44.8
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 1.3e-21 107.5 169 39.6
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.0e-18 97.8 74 66.2
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 1.5e-17 94.0 100 51.0
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 2.6e-14 83.2 87 50.6
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 1.1e-12 77.8 45 82.2
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 3.0e-10 69.7 45 68.9
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 3.9e-10 69.3 77 51.9
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 6.2e-08 62.0 103 40.8
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 8.1e-08 61.6 153 34.0
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 1.1e-07 61.2 55 50.9
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-07 59.7 137 29.2
MCO02G048 Micromonas commoda HOM05D005768 ORTHO05D007100 7.5e-06 55.1 161 31.7


User provided reference genes

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