Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-60 235.7 123 100.0
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-60 235.7 123 100.0
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 8.2e-32 140.6 130 63.8
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.1e-31 140.2 129 63.6
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 4.5e-30 134.8 79 83.5
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 3.8e-29 131.7 86 74.4
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 6.5e-29 131.0 89 73.0
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 8.4e-29 130.6 98 68.4
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.1e-28 130.2 99 69.7
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 3.2e-28 128.6 103 68.0
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 9.3e-28 127.1 91 67.0
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 1.6e-27 126.3 90 71.1
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 1.6e-27 126.3 126 54.8
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.1e-27 125.9 126 55.6
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 2.1e-27 125.9 79 78.5
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.5e-27 125.2 91 65.9
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 4.6e-27 124.8 99 67.7
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 4.6e-27 124.8 95 66.3
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 6.0e-27 124.4 97 68.0
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 6.0e-27 124.4 103 62.1
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 6.0e-27 124.4 103 62.1
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.8e-26 122.9 119 56.3
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 1.8e-26 122.9 83 72.3
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 3.0e-26 122.1 99 64.6
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.9e-26 121.7 127 54.3
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.9e-26 121.7 127 54.3
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 6.7e-26 120.9 124 55.6
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 6.7e-26 120.9 113 58.4
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 8.7e-26 120.6 82 70.7
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 1.9e-25 119.4 113 56.6
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.9e-25 119.4 79 72.2
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 2.5e-25 119.0 80 76.2
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 3.3e-25 118.6 89 65.2
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 5.7e-25 117.9 119 55.5
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 7.4e-25 117.5 79 74.7
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.6e-24 116.3 82 72.0
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 2.2e-24 115.9 122 55.7
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.8e-24 115.5 87 69.0
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.8e-24 115.5 97 61.9
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 2.8e-24 115.5 93 66.7
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 3.7e-24 115.2 82 68.3
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 4.8e-24 114.8 122 54.9
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 6.3e-24 114.4 83 66.3
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 8.2e-24 114.0 82 67.1
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.1e-23 113.6 119 55.5
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.4e-23 113.2 82 67.1
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 2.4e-23 112.5 82 64.6
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.1e-23 112.1 114 57.0
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 3.1e-23 112.1 105 59.0
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 5.3e-23 111.3 123 57.7
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 5.3e-23 111.3 97 58.8
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 6.9e-23 110.9 82 67.1
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 6.9e-23 110.9 84 70.2
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 9.0e-23 110.5 130 50.0
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 9.0e-23 110.5 79 67.1
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.2e-22 110.2 108 53.7
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.2e-22 110.2 75 72.0
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.2e-22 110.2 86 65.1
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.2e-22 110.2 89 60.7
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.6e-22 109.0 79 68.4
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 3.4e-22 108.6 120 53.3
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 4.5e-22 108.2 104 58.7
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 4.5e-22 108.2 104 58.7
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 4.5e-22 108.2 104 58.7
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 4.5e-22 108.2 97 58.8
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 4.5e-22 108.2 80 66.2
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 5.9e-22 107.8 79 65.8
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 5.9e-22 107.8 109 56.9
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 7.6e-22 107.5 79 67.1
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 7.6e-22 107.5 103 56.3
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 7.6e-22 107.5 133 51.1
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.0e-21 107.1 81 69.1
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 1.0e-21 107.1 85 62.4
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.0e-21 107.1 79 64.6
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.7e-21 106.3 120 51.7
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.7e-21 106.3 82 69.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 1.7e-21 106.3 84 63.1
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 2.9e-21 105.5 85 65.9
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 3.8e-21 105.1 74 73.0
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 3.8e-21 105.1 103 55.3
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 6.5e-21 104.4 79 64.6
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 6.5e-21 104.4 79 64.6
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 6.5e-21 104.4 79 64.6
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 6.5e-21 104.4 80 65.0
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 8.5e-21 104.0 85 64.7
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 8.5e-21 104.0 79 65.8
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.1e-20 103.6 82 68.3
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.4e-20 103.2 83 62.7
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 1.9e-20 102.8 74 67.6
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.9e-20 102.8 80 66.2
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 1.9e-20 102.8 128 50.0
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 2.5e-20 102.4 74 67.6
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 3.2e-20 102.1 80 66.2
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 5.5e-20 101.3 84 60.7
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 5.5e-20 101.3 74 68.9
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 9.3e-20 100.5 79 60.8
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.6e-19 99.8 63 77.8
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.6e-19 99.8 63 77.8
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.6e-19 99.8 63 77.8
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 2.1e-19 99.4 65 69.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 7.9e-19 97.4 120 49.2
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 1.8e-18 96.3 94 57.4
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 3.0e-18 95.5 105 52.4
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 8.8e-18 94.0 74 58.1
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 8.8e-18 94.0 70 72.9
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 1.5e-17 93.2 114 49.1
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.5e-17 92.4 60 75.0
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 3.3e-17 92.0 96 52.1
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 4.3e-17 91.7 100 52.0
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 4.3e-17 91.7 62 75.8
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 1.2e-14 83.6 77 50.6
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 1.0e-13 80.5 192 33.9
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 7.2e-12 74.3 52 71.2
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 1.0e-10 70.5 50 60.0
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 4.4e-09 65.1 58 60.3
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 5.7e-09 64.7 68 44.1
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 1.8e-07 59.7 43 55.8


User provided reference genes

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