Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 7.8e-101 370.5 197 100.0
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 6.6e-100 367.5 197 98.5
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.2e-80 303.5 196 82.1
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 1.2e-77 293.5 200 81.0
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.6e-77 293.1 197 79.7
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 2.1e-77 292.7 197 78.7
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 4.6e-77 291.6 196 78.6
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 6.0e-77 291.2 199 79.9
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 6.0e-77 291.2 199 79.9
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 2.3e-76 289.3 198 81.3
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 8.6e-76 287.3 197 76.6
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 1.5e-75 286.6 197 77.2
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 1.5e-75 286.6 195 79.5
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 2.5e-75 285.8 196 77.6
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.5e-75 285.8 197 75.1
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.5e-75 285.8 197 76.6
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 9.6e-75 283.9 196 77.0
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 9.6e-75 283.9 197 76.6
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.6e-74 283.1 197 75.6
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 3.6e-74 282.0 197 76.6
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 3.6e-74 282.0 195 78.5
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 8.1e-74 280.8 197 74.1
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 8.1e-74 280.8 199 75.9
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 1.4e-73 280.0 196 76.5
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.8e-73 279.6 197 76.1
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 3.1e-73 278.9 193 77.7
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 6.8e-73 277.7 197 75.1
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 8.9e-73 277.3 198 76.3
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 8.9e-73 277.3 198 76.3
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 8.9e-73 277.3 198 76.3
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 8.9e-73 277.3 198 76.3
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 8.9e-73 277.3 193 77.7
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.5e-72 276.6 197 74.6
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.0e-72 276.2 197 74.6
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 2.0e-72 276.2 197 75.1
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 2.6e-72 275.8 197 74.6
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-72 275.8 197 74.6
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-72 275.8 197 74.1
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.4e-72 275.4 198 75.3
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 4.4e-72 275.0 198 75.8
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 4.4e-72 275.0 198 75.8
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 4.4e-72 275.0 197 72.6
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 4.4e-72 275.0 200 76.5
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 7.6e-72 274.2 205 75.1
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 1.3e-71 273.5 200 75.5
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.7e-71 273.1 193 76.2
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.2e-71 272.7 200 75.5
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.2e-71 272.7 193 75.1
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 2.9e-71 272.3 198 75.3
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 6.4e-71 271.2 197 74.1
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 6.4e-71 271.2 200 75.5
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.1e-70 270.4 193 75.1
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 1.4e-70 270.0 201 73.1
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.4e-70 270.0 198 73.7
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.9e-70 269.6 198 74.7
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 2.4e-70 269.2 193 74.1
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 3.2e-70 268.9 196 74.0
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 3.2e-70 268.9 200 71.5
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 4.2e-70 268.5 197 73.6
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 4.2e-70 268.5 195 73.8
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 4.2e-70 268.5 200 75.0
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 5.4e-70 268.1 198 72.7
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 5.4e-70 268.1 200 74.5
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 1.2e-69 266.9 197 74.6
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.2e-69 266.9 195 73.3
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.6e-69 266.5 198 76.3
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 2.7e-69 265.8 195 72.8
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 6.0e-69 264.6 160 85.0
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 7.8e-69 264.2 197 73.6
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.3e-68 263.5 197 72.6
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.3e-68 263.5 197 75.1
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.7e-68 263.1 192 72.4
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.7e-68 263.1 197 71.1
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 2.3e-68 262.7 192 72.4
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 3.0e-68 262.3 192 72.4
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.1e-67 260.4 197 72.6
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 1.1e-67 260.4 161 83.2
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 1.1e-67 260.4 198 71.7
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 1.5e-67 260.0 198 73.2
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 5.6e-67 258.1 199 72.9
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 5.6e-67 258.1 211 66.8
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.1e-66 256.1 197 71.6
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 2.8e-66 255.8 197 68.0
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 3.6e-66 255.4 198 72.2
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 8.1e-66 254.2 202 72.3
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.8e-65 253.1 200 69.0
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 1.8e-65 253.1 198 71.2
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 4.0e-65 251.9 200 68.5
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 5.3e-65 251.5 150 86.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.2e-64 250.4 189 74.6
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 2.0e-64 249.6 164 76.8
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 1.3e-63 246.9 191 70.2
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 3.8e-63 245.4 197 70.1
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 3.8e-63 245.4 195 67.7
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 3.2e-62 242.3 197 66.5
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 7.8e-61 237.7 195 66.7
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 1.3e-58 230.3 149 83.2
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 2.8e-58 229.2 195 60.5
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 2.9e-47 192.6 207 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 6.5e-47 191.4 161 55.9
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 4.2e-46 188.7 141 71.6
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.8e-41 173.3 158 55.1
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.8e-41 173.3 158 55.1
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.8e-41 173.3 162 53.7
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.8e-41 173.3 162 53.7
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 2.6e-40 169.5 105 83.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 4.5e-40 168.7 157 54.1
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 1.7e-39 166.8 159 51.6
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.1e-38 164.1 103 81.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.8e-36 156.8 94 87.2
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 4.3e-35 152.1 103 77.7
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 5.7e-35 151.8 102 79.4
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.1e-29 133.3 90 77.8
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 3.6e-29 132.5 114 65.8
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.8e-25 120.2 88 67.0
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 5.9e-24 115.2 71 81.7
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 2.5e-22 109.8 93 63.4
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 6.7e-20 101.7 149 36.2
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 1.3e-18 97.4 92 60.9
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.7e-18 97.1 155 34.2
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.4e-17 94.0 88 59.1
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 1.0e-15 87.8 162 31.5
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.9e-15 86.3 105 47.6
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 4.4e-11 72.4 153 32.0
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.2e-10 70.1 59 61.0
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 2.4e-09 66.6 44 65.9
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 3.8e-07 59.3 92 39.1
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.5e-06 57.4 48 62.5


User provided reference genes

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