Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 6.0e-183 644.0 323 100.0
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 1.4e-179 632.9 323 98.1
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 6.7e-142 507.7 362 74.6
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 1.4e-131 473.4 323 70.0
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 1.4e-128 463.4 323 71.2
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 4.6e-127 458.4 323 69.0
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 1.9e-125 453.0 323 66.3
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 9.1e-123 444.1 323 68.4
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 1.5e-122 443.4 324 66.0
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 8.5e-121 437.6 323 66.3
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 1.4e-120 436.8 324 66.0
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 7.2e-120 434.5 323 63.8
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 7.2e-120 434.5 323 65.3
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 9.4e-120 434.1 324 65.7
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 3.6e-119 432.2 324 65.4
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 6.1e-119 431.4 325 65.2
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 6.1e-119 431.4 323 64.4
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 1.4e-118 430.3 323 65.0
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 1.4e-118 430.3 323 63.2
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 2.3e-118 429.5 330 64.2
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 3.0e-118 429.1 324 64.8
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.9e-118 428.7 324 65.7
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 3.9e-118 428.7 324 65.4
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 3.9e-118 428.7 324 63.0
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 8.8e-118 427.6 323 65.3
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.4e-117 425.2 308 67.5
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.4e-117 425.2 323 66.3
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 9.7e-117 424.1 323 63.2
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.8e-116 422.5 323 65.6
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 4.8e-116 421.8 324 64.8
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 6.3e-116 421.4 324 64.8
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 5.9e-114 414.8 327 62.1
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 3.8e-113 412.1 323 60.4
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 5.0e-113 411.8 323 60.4
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 8.5e-113 411.0 326 61.7
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 3.2e-112 409.1 323 60.1
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.2e-112 409.1 324 62.0
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 5.5e-112 408.3 325 61.2
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 1.6e-111 406.8 363 55.6
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 1.6e-111 406.8 323 60.4
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 2.1e-111 406.4 324 61.7
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 3.6e-111 405.6 326 61.0
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.0e-110 404.1 324 61.4
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.4e-110 403.7 323 61.6
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 1.8e-110 403.3 323 59.4
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 5.2e-110 401.7 379 54.4
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 2.6e-109 399.4 324 58.3
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 9.7e-109 397.5 324 58.0
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 9.7e-109 397.5 339 58.4
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 1.7e-108 396.7 261 80.5
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 2.2e-108 396.4 325 59.7
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 3.7e-108 395.6 306 61.8
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 8.2e-108 394.4 328 60.1
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 1.4e-107 393.7 392 52.6
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 4.1e-107 392.1 323 57.9
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 2.0e-106 389.8 324 57.4
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 2.0e-106 389.8 323 57.3
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 5.9e-106 388.3 338 57.7
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 5.9e-106 388.3 324 58.3
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 2.2e-105 386.3 323 59.4
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 2.2e-105 386.3 325 59.1
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 3.8e-105 385.6 326 58.6
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 6.5e-105 384.8 323 60.1
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 8.5e-105 384.4 323 60.1
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 1.5e-104 383.6 324 59.6
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 5.5e-104 381.7 323 57.9
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 9.4e-104 380.9 323 59.1
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 1.6e-103 380.2 323 55.1
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 2.7e-103 379.4 323 60.1
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 4.7e-103 378.6 323 57.9
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 1.4e-102 377.1 323 56.7
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 3.0e-102 375.9 323 54.5
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 4.0e-102 375.6 327 56.0
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 6.7e-102 374.8 341 55.1
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 1.5e-101 373.6 324 55.2
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.6e-101 372.9 325 59.1
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 3.3e-101 372.5 325 59.4
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 1.3e-100 370.5 309 58.6
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 8.2e-100 367.9 324 57.1
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 1.1e-99 367.5 326 58.0
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 1.1e-99 367.5 323 55.7
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 7.0e-99 364.8 323 56.7
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 3.5e-98 362.5 364 49.5
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 3.5e-98 362.5 324 53.1
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 1.7e-97 360.1 324 56.5
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 1.7e-97 360.1 324 56.5
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 6.5e-97 358.2 324 54.6
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 6.5e-97 358.2 326 54.6
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 8.5e-97 357.8 333 53.8
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 2.5e-96 356.3 326 55.2
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 3.2e-96 355.9 323 55.7
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 7.2e-96 354.8 333 52.9
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 1.2e-95 354.0 323 52.9
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 1.6e-95 353.6 323 56.0
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.6e-95 353.6 329 53.8
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 8.0e-95 351.3 307 56.0
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 8.0e-95 351.3 314 55.4
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 4.0e-94 349.0 363 50.4
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 6.8e-94 348.2 349 50.4
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 1.7e-92 343.6 359 49.9
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.7e-92 343.6 327 53.8
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 3.7e-92 342.4 327 53.2
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 1.8e-91 340.1 326 52.5
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 1.8e-91 340.1 368 49.5
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 5.4e-91 338.6 284 61.6
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 1.2e-90 337.4 324 53.1
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 2.7e-90 336.3 323 55.7
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.9e-88 330.1 331 52.6
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 6.8e-86 321.6 326 50.6
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 2.0e-85 320.1 285 58.6
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 5.7e-85 318.5 346 48.0
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 7.5e-85 318.2 249 62.7
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.2e-84 316.6 267 56.6
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 3.3e-80 302.8 234 62.0
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 4.0e-78 295.8 306 50.7
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 1.4e-75 287.3 221 59.3
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 1.1e-70 271.2 323 44.0
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 9.8e-69 264.6 334 46.7
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.3e-68 264.2 247 52.6
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 2.2e-68 263.5 308 44.8
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 4.1e-67 259.2 325 45.2
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 7.3e-64 248.4 294 49.0
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.9e-60 236.5 323 41.2
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 3.7e-60 236.1 211 58.3
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 1.1e-59 234.6 210 58.6
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 7.8e-58 228.4 174 64.9
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 1.2e-55 221.1 290 43.1
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 2.1e-55 220.3 145 76.6
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.2e-50 204.5 173 60.1
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.8e-47 193.4 262 42.4
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 1.4e-46 191.0 165 60.6
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 5.2e-46 189.1 145 64.8
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 1.5e-45 187.6 127 67.7
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.2e-44 183.7 149 58.4
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 3.8e-44 183.0 345 35.4
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 8.4e-44 181.8 214 48.6
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 8.4e-44 181.8 344 34.6
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 1.3e-41 174.5 163 52.1
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 9.0e-38 161.8 159 49.7
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 2.3e-33 147.1 223 35.9
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 2.3e-33 147.1 121 56.2
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 1.9e-32 144.1 215 34.4
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 4.3e-32 142.9 307 30.9
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 2.0e-29 134.0 119 48.7
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 1.4e-27 127.9 120 52.5
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 8.7e-25 118.6 83 68.7
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 4.2e-19 99.8 75 58.7
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 5.5e-19 99.4 96 55.2
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 9.3e-19 98.6 75 58.7
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 9.3e-19 98.6 75 58.7
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.2e-18 98.2 78 56.4
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 1.6e-18 97.8 84 63.1
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.3e-17 94.7 166 38.0
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 1.9e-16 90.9 89 47.2
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.8e-15 87.0 78 57.7
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 1.1e-14 85.1 59 69.5
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 4.6e-10 69.7 57 64.9
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 6.1e-10 69.3 59 59.3
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 6.7e-09 65.9 54 63.0


User provided reference genes

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