Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 3.8e-90 335.1 208 100.0
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 6.3e-77 291.2 208 83.7
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 9.3e-20 101.3 182 38.5
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 3.5e-19 99.4 201 41.3
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 7.8e-19 98.2 80 51.2
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 2.3e-18 96.7 68 58.8
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 3.9e-18 95.9 80 51.2
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 8.7e-18 94.7 74 54.1
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 4.3e-17 92.4 201 33.3
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 5.6e-17 92.0 208 42.8
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 1.3e-16 90.9 79 50.6
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 2.8e-16 89.7 68 57.4
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 6.2e-16 88.6 67 55.2
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 8.1e-16 88.2 147 35.4
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 8.1e-16 88.2 67 53.7
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 1.1e-15 87.8 149 35.6
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 1.8e-15 87.0 134 36.6
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.8e-15 87.0 203 37.9
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 1.8e-15 87.0 195 33.8
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 3.1e-15 86.3 199 33.2
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 3.1e-15 86.3 206 33.5
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 1.5e-14 84.0 200 45.5
Thecc.01G136200 Theobroma cacao HOM05D001418 ORTHO05D003753 1.5e-14 84.0 206 35.4
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 2.0e-14 83.6 203 33.5
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 2.6e-14 83.2 135 41.5
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 4.5e-14 82.4 72 47.2
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 7.6e-14 81.6 78 43.6
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 7.6e-14 81.6 140 35.0
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 9.9e-14 81.3 195 29.7
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 1.3e-13 80.9 140 33.6
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.3e-13 80.9 199 37.2
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 2.2e-13 80.1 208 33.2
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.9e-13 79.7 208 33.2
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 2.9e-13 79.7 74 45.9
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 3.8e-13 79.3 68 51.5
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 4.9e-13 79.0 197 33.0
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 8.4e-13 78.2 197 32.5
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 8.4e-13 78.2 63 52.4
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 8.4e-13 78.2 63 52.4
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.1e-12 77.8 208 30.3
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 1.1e-12 77.8 79 45.6
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 1.1e-12 77.8 79 45.6
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 1.4e-12 77.4 204 31.9
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.4e-12 77.4 68 47.1
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 1.4e-12 77.4 77 42.9
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 1.4e-12 77.4 74 44.6
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 1.9e-12 77.0 67 52.2
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 1.9e-12 77.0 134 37.3
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 2.4e-12 76.6 207 39.6
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 3.2e-12 76.3 208 29.8
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 5.4e-12 75.5 69 43.5
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 5.4e-12 75.5 174 30.5
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 9.3e-12 74.7 208 28.8
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 9.3e-12 74.7 70 45.7
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 1.6e-11 73.9 79 41.8
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 2.7e-11 73.2 194 30.9
Sc06g0005400 Simmondsia chinensis HOM05D001418 ORTHO05D003753 2.7e-11 73.2 69 46.4
Duzib187G1961 Durio zibethinus HOM05D001418 ORTHO05D003753 3.5e-11 72.8 207 31.4
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 3.5e-11 72.8 65 46.2
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 3.5e-11 72.8 205 36.1
ClCG02G000350 Citrullus lanatus HOM05D001418 ORTHO05D003753 4.6e-11 72.4 64 50.0
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 4.6e-11 72.4 197 28.9
Atru.chr4.944 Acer truncatum HOM05D001418 ORTHO05D003753 7.9e-11 71.6 69 46.4
ATR1001G015 Amborella trichopoda HOM05D007511 ORTHO05D003753 7.9e-11 71.6 63 50.8
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 7.9e-11 71.6 181 29.8
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 1.0e-10 71.2 63 47.6
MELO3C023225.2 Cucumis melo HOM05D001418 ORTHO05D003753 1.3e-10 70.9 74 47.3
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 1.3e-10 70.9 79 39.2
Duzib264G0973 Durio zibethinus HOM05D001418 ORTHO05D003753 1.8e-10 70.5 210 31.0
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 2.3e-10 70.1 63 47.6
CsaV3_2G019490 Cucumis sativus L. HOM05D001418 ORTHO05D003753 2.3e-10 70.1 64 48.4
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 2.3e-10 70.1 154 31.2
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 2.3e-10 70.1 63 47.6
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 3.9e-10 69.3 74 41.9
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 5.1e-10 68.9 68 39.7
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 5.1e-10 68.9 77 40.3
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 6.7e-10 68.6 68 41.2
Lalb_Chr12g0203061 Lupinus albus HOM05D001418 ORTHO05D003753 8.7e-10 68.2 63 47.6
Glyma.06G155400 Glycine max HOM05D001418 ORTHO05D003753 1.1e-09 67.8 68 42.6
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 1.1e-09 67.8 158 38.6
QL10p041669 Quercus lobata HOM05D001418 ORTHO05D003753 1.1e-09 67.8 68 42.6
QL10p041870 Quercus lobata HOM05D001418 ORTHO05D003753 1.1e-09 67.8 68 42.6
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 1.5e-09 67.4 77 40.3
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 1.5e-09 67.4 137 29.9
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 1.5e-09 67.4 66 48.5
Ciclev10003211m.g Citrus clementina HOM05D001418 ORTHO05D003753 1.9e-09 67.0 65 46.2
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 1.9e-09 67.0 64 45.3
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 2.5e-09 66.6 138 29.7
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 2.5e-09 66.6 206 37.4
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 2.5e-09 66.6 61 49.2
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 2.5e-09 66.6 61 49.2
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 3.3e-09 66.2 191 28.3
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 3.3e-09 66.2 68 41.2
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 3.3e-09 66.2 68 41.2
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 3.3e-09 66.2 59 49.2
Zm00001eb112650 Zea mays HOM05D001418 ORTHO05D003753 3.3e-09 66.2 72 44.4
Sabra05G0054800 Salix brachista HOM05D001418 ORTHO05D003753 4.3e-09 65.9 70 42.9
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 4.3e-09 65.9 178 31.5
CDE02G0326 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 5.6e-09 65.5 68 41.2
Gohir.A11G057300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 5.6e-09 65.5 60 43.3
Gohir.D11G061300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 5.6e-09 65.5 60 43.3
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 5.6e-09 65.5 69 46.4
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 7.4e-09 65.1 68 42.6
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 7.4e-09 65.1 68 42.6
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 7.4e-09 65.1 68 39.7
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 7.4e-09 65.1 68 42.6
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 7.4e-09 65.1 68 42.6
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 7.4e-09 65.1 68 39.7
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 9.6e-09 64.7 68 39.7
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 9.6e-09 64.7 70 45.7
Lalb_Chr07g0184281 Lupinus albus HOM05D001418 ORTHO05D003753 9.6e-09 64.7 63 44.4
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 9.6e-09 64.7 55 49.1
Gorai.007G066200 Gossypium raimondii HOM05D001418 ORTHO05D003753 1.3e-08 64.3 60 41.7
Lj4g0007966 Lotus japonicus HOM05D001418 ORTHO05D003753 1.3e-08 64.3 55 49.1
CiPaw.03G118500 Carya illinoinensis HOM05D001418 ORTHO05D003753 2.1e-08 63.5 62 46.8
Glyma.04G210600 Glycine max HOM05D001418 ORTHO05D003753 2.1e-08 63.5 60 45.0
Glyma.08G001800 Glycine max HOM05D001418 ORTHO05D003753 2.1e-08 63.5 70 42.9
HanXRQChr04g0119711 Helianthus annuus HOM05D007511 ORTHO05D003753 2.1e-08 63.5 165 26.7
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 2.1e-08 63.5 68 36.8
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 2.8e-08 63.2 192 29.2
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 2.8e-08 63.2 151 29.1
Phvul.002G274200 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 2.8e-08 63.2 70 41.4
Sed0024034 Sechium edule HOM05D001418 ORTHO05D003753 2.8e-08 63.2 64 43.8
VMungo0251G3540 Vigna mungo HOM05D001418 ORTHO05D003753 2.8e-08 63.2 61 50.8
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 3.7e-08 62.8 136 27.2
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 3.7e-08 62.8 152 28.9
Os11g0195700 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 3.7e-08 62.8 72 36.1
arahy.Tifrunner.gnm1.ann1.QAD3X4 Arachis hypogaea HOM05D001418 ORTHO05D003753 6.2e-08 62.0 68 44.1
Haze_25311 Corylus avellana HOM05D001418 ORTHO05D003753 6.2e-08 62.0 64 42.2
Cfa021634 Carpinus fangiana HOM05D001418 ORTHO05D003753 8.1e-08 61.6 64 42.2
Cfa021635 Carpinus fangiana HOM05D001418 ORTHO05D003753 8.1e-08 61.6 64 42.2
CiPaw.03G118600 Carya illinoinensis HOM05D001418 ORTHO05D003753 8.1e-08 61.6 70 37.1
Haze_18313 Corylus avellana HOM05D001418 ORTHO05D003753 8.1e-08 61.6 64 42.2
Gohir.A09G005000 Gossypium hirsutum HOM05D001418 ORTHO05D003753 8.1e-08 61.6 78 37.2
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 1.4e-07 60.8 171 31.0
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 1.4e-07 60.8 171 31.0
Phvul.009G155100 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 1.8e-07 60.5 63 39.7
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 2.4e-07 60.1 71 38.0
Zm00001eb408450 Zea mays HOM05D001418 ORTHO05D003753 2.4e-07 60.1 214 26.6
PGR102G3103 Punica granatum HOM05D001418 ORTHO05D003753 3.1e-07 59.7 201 25.9
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 4.0e-07 59.3 170 29.4
Sed0004234 Sechium edule HOM05D001418 ORTHO05D003753 4.0e-07 59.3 58 44.8
Zm00001eb202060 Zea mays HOM05D001418 ORTHO05D003753 4.0e-07 59.3 61 44.3
Sabra07G0084500 Salix brachista HOM05D001418 ORTHO05D003753 5.3e-07 58.9 206 28.2
CiPaw.04G080200 Carya illinoinensis HOM05D001418 ORTHO05D003753 6.9e-07 58.5 68 38.2
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.0e-07 58.2 71 36.6
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 9.0e-07 58.2 180 31.7
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 1.2e-06 57.8 176 29.0
Potri.005G066500 Populus trichocarpa HOM05D001418 ORTHO05D003753 1.2e-06 57.8 205 30.2
Prupe.4G274100 Prunus persica HOM05D001418 ORTHO05D003753 1.2e-06 57.8 203 28.1
SGA_v2.0_scaffold95G28750 Striga asiatica HOM05D007511 ORTHO05D003753 2.0e-06 57.0 66 40.9
VMungo1309G0848 Vigna mungo HOM05D001418 ORTHO05D003753 2.6e-06 56.6 63 36.5
CSS0038510 Camellia sinensis var. sinensis HOM05D007511 ORTHO05D003753 4.5e-06 55.8 68 35.3
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 4.5e-06 55.8 72 31.9
Gohir.D09G004300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 5.8e-06 55.5 204 26.5
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 7.6e-06 55.1 68 33.8
AUR62034848 Chenopodium quinoa HOM05D001418 ORTHO05D003753 9.9e-06 54.7 191 27.7


User provided reference genes

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