Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 6.0e-127 457.6 243 100.0
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 5.4e-120 434.5 243 95.1
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 3.0e-38 162.9 224 46.9
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.7e-36 157.1 243 45.3
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 4.5e-34 149.1 222 43.7
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 5.9e-34 148.7 219 43.8
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 7.7e-34 148.3 211 45.5
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 7.7e-34 148.3 217 45.6
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.7e-33 147.1 255 42.0
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 2.2e-33 146.7 230 40.9
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.2e-33 146.7 214 46.3
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.2e-33 146.7 229 44.1
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 2.9e-33 146.4 229 40.2
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 6.5e-33 145.2 212 44.8
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 8.5e-33 144.8 237 42.6
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 1.9e-32 143.7 237 42.2
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 3.2e-32 142.9 230 43.0
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 3.2e-32 142.9 247 39.7
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 5.5e-32 142.1 228 42.5
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 9.4e-32 141.4 229 41.0
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.2e-31 141.0 246 40.2
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.2e-31 141.0 230 40.9
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.6e-31 140.6 245 40.0
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 1.6e-31 140.6 216 43.1
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 2.7e-31 139.8 223 40.8
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.6e-31 139.4 245 39.6
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 3.6e-31 139.4 229 38.4
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 4.7e-31 139.0 209 42.6
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.7e-31 139.0 246 39.8
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 6.1e-31 138.7 211 46.4
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 6.1e-31 138.7 212 42.0
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 6.1e-31 138.7 202 45.0
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.1e-31 138.7 245 40.0
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 8.0e-31 138.3 231 41.6
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 8.0e-31 138.3 229 41.0
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.0e-30 137.9 218 41.7
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.4e-30 137.5 223 40.8
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.8e-30 137.1 231 42.4
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.8e-30 137.1 228 43.0
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.8e-30 137.1 241 41.5
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.3e-30 136.7 224 41.5
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 3.0e-30 136.3 235 40.0
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 3.0e-30 136.3 229 40.2
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 6.8e-30 135.2 230 39.6
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.2e-29 134.4 244 40.2
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.6e-29 133.3 211 43.6
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.4e-29 132.9 220 43.2
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 4.4e-29 132.5 221 42.1
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 5.7e-29 132.1 236 37.7
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.3e-28 131.0 219 40.2
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 8.3e-28 128.3 213 39.4
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 2.4e-27 126.7 254 38.6
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 5.4e-27 125.6 229 40.2
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 1.2e-26 124.4 219 39.7
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.6e-26 124.0 224 37.5
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 2.7e-26 123.2 205 40.0
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.7e-26 123.2 224 40.2
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.7e-26 123.2 238 36.6
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.7e-26 123.2 210 43.3
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 3.5e-26 122.9 224 37.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 7.7e-26 121.7 208 41.3
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 7.7e-26 121.7 232 37.9
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 7.7e-26 121.7 119 58.8
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.3e-25 120.9 218 39.0
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 1.7e-25 120.6 211 39.8
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.3e-25 120.2 224 37.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.9e-25 119.8 223 36.3
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.8e-25 119.4 232 37.1
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 5.0e-25 119.0 221 40.3
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 6.6e-25 118.6 229 37.6
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 6.6e-25 118.6 222 39.2
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 6.6e-25 118.6 221 38.5
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 6.6e-25 118.6 212 38.7
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 8.6e-25 118.2 229 37.1
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.3e-24 116.3 99 63.6
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 3.3e-24 116.3 194 41.2
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 4.2e-24 115.9 203 38.4
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 5.5e-24 115.5 210 38.6
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.1e-23 113.6 226 38.5
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 8.0e-23 111.7 229 35.4
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 8.0e-23 111.7 238 34.9
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.8e-22 110.5 116 53.4
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 2.3e-22 110.2 237 35.4
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 4.0e-22 109.4 238 34.9
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.5e-21 107.5 208 38.5
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 5.7e-21 105.5 234 37.6
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 6.3e-20 102.1 211 36.5
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 8.3e-20 101.7 238 35.3
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 2.4e-19 100.1 171 41.5
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 9.2e-19 98.2 186 39.2
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 2.7e-18 96.7 228 33.8
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.5e-18 95.9 199 38.7
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 7.8e-18 95.1 111 49.5
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 3.9e-17 92.8 226 34.1
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 3.9e-17 92.8 226 34.1
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 6.6e-17 92.0 206 34.5
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.1e-16 91.3 198 34.8
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.1e-16 91.3 186 37.1
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 2.5e-16 90.1 191 35.6
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 2.5e-16 90.1 226 34.1
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.6e-15 87.4 199 35.2
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 2.1e-15 87.0 99 50.5
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.8e-15 86.7 221 32.6
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 3.6e-15 86.3 209 35.4
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.8e-14 84.0 214 33.2
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 1.8e-14 84.0 89 51.7
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 3.1e-14 83.2 194 34.0
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 1.2e-13 81.3 225 33.8
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 2.0e-13 80.5 214 33.2
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 2.0e-13 80.5 211 33.2
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 2.0e-13 80.5 214 33.2
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 2.0e-13 80.5 214 33.2
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 3.4e-13 79.7 223 31.8
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 4.4e-13 79.3 205 33.2
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 4.4e-13 79.3 229 31.0
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 7.5e-13 78.6 215 34.0
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.2e-12 77.0 202 32.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 8.3e-12 75.1 196 33.2
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 1.4e-11 74.3 217 32.3
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.4e-11 73.6 201 33.8
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 9.2e-11 71.6 115 40.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.3e-09 67.8 115 39.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.3e-09 67.8 115 39.1
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 8.6e-09 65.1 217 32.3
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.3e-08 62.8 142 33.8
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.2e-07 61.2 167 29.9
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.6e-07 60.8 209 31.1
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 2.1e-07 60.5 244 27.0
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.4e-06 57.8 142 33.1
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 5.2e-06 55.8 170 31.2


User provided reference genes

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