Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 6.7e-183 644.0 361 100.0
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 1.3e-175 619.8 361 92.5
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 1.0e-58 231.5 346 49.4
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 1.0e-58 231.5 345 49.6
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 3.0e-58 229.9 354 50.3
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 3.0e-58 229.9 349 43.8
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 5.1e-58 229.2 356 48.9
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 6.7e-58 228.8 352 49.7
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 2.5e-57 226.9 349 47.3
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 1.3e-56 224.6 352 46.0
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 8.2e-56 221.9 350 47.1
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 3.8e-53 213.0 357 45.7
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 2.5e-52 210.3 339 46.9
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 2.5e-52 210.3 339 47.5
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 3.2e-52 209.9 339 47.2
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 5.5e-52 209.1 350 46.9
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 9.3e-52 208.4 340 44.1
PSO063G4277 Papaver somniferum HOM05D005253 ORTHO05D006058 9.3e-52 208.4 113 97.3
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 1.6e-51 207.6 344 47.7
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 2.1e-51 207.2 329 43.8
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 2.7e-51 206.8 369 41.7
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 3.0e-50 203.4 351 47.0
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 8.7e-50 201.8 350 44.6
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 3.3e-49 199.9 347 44.4
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 3.3e-49 199.9 333 45.9
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 3.3e-49 199.9 342 40.1
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 5.7e-49 199.1 372 40.1
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 5.7e-49 199.1 339 41.0
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 4.8e-48 196.1 342 44.2
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 6.3e-48 195.7 348 45.7
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 8.2e-48 195.3 348 44.0
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 1.1e-47 194.9 333 45.0
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 1.1e-47 194.9 347 42.1
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.4e-47 194.5 333 45.9
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 5.3e-47 192.6 310 42.9
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 5.3e-47 192.6 344 44.8
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 5.3e-47 192.6 339 44.5
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 6.9e-47 192.2 346 44.8
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 9.1e-47 191.8 323 44.9
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 1.2e-46 191.4 312 47.1
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 1.5e-46 191.0 340 41.8
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 2.0e-46 190.7 342 44.4
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 2.0e-46 190.7 346 45.7
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 3.4e-46 189.9 340 43.5
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 5.9e-46 189.1 326 46.9
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 3.8e-45 186.4 349 43.0
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 5.0e-45 186.0 348 44.8
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 6.5e-45 185.7 341 46.3
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 8.5e-45 185.3 338 42.6
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 1.4e-44 184.5 352 44.0
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 4.2e-44 183.0 347 45.0
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 7.2e-44 182.2 300 42.0
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 1.6e-43 181.0 335 43.9
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 1.6e-43 181.0 335 40.6
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 2.1e-43 180.6 340 40.6
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 2.1e-43 180.6 309 47.6
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 2.1e-43 180.6 511 34.4
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 2.1e-43 180.6 336 44.6
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 2.7e-43 180.3 342 38.3
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 3.6e-43 179.9 350 44.6
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 7.9e-43 178.7 331 44.4
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 1.0e-42 178.3 347 43.2
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 1.4e-42 177.9 351 41.3
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 3.9e-42 176.4 350 40.9
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 3.9e-42 176.4 336 39.0
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 3.9e-42 176.4 348 43.1
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 1.1e-41 174.9 354 43.5
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 1.5e-41 174.5 299 42.1
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 2.6e-41 173.7 342 37.4
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 5.7e-41 172.6 343 39.9
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 1.7e-40 171.0 309 44.7
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 2.2e-40 170.6 293 39.2
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 2.8e-40 170.2 342 37.4
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 2.8e-40 170.2 339 40.1
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 3.7e-40 169.9 359 36.8
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 3.7e-40 169.9 389 35.7
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 3.1e-39 166.8 320 40.3
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 3.1e-39 166.8 307 44.6
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 1.5e-38 164.5 313 40.9
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 2.0e-38 164.1 310 43.5
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 3.4e-38 163.3 339 41.0
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 5.9e-38 162.5 353 39.4
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 2.2e-37 160.6 347 43.5
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 2.9e-37 160.2 340 35.6
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 2.9e-37 160.2 340 35.6
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 2.9e-37 160.2 258 47.7
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 5.0e-37 159.5 327 41.0
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 5.0e-37 159.5 293 37.5
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 3.2e-36 156.8 343 41.4
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 7.2e-36 155.6 330 42.4
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 9.4e-36 155.2 343 35.9
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 2.1e-35 154.1 311 41.2
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 6.1e-35 152.5 315 40.6
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 6.1e-35 152.5 292 38.0
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 1.4e-34 151.4 349 38.4
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 1.8e-34 151.0 348 35.3
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 1.8e-34 151.0 312 42.3
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 3.0e-34 150.2 349 39.0
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 8.8e-34 148.7 300 37.0
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 2.0e-33 147.5 341 40.5
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 5.7e-33 146.0 307 40.4
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 9.7e-33 145.2 251 45.8
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 9.7e-33 145.2 342 35.7
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 1.3e-32 144.8 299 35.5
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 1.3e-32 144.8 340 35.0
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 1.3e-32 144.8 312 34.3
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 2.2e-32 144.1 449 33.9
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 4.8e-32 142.9 293 35.2
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 8.2e-32 142.1 299 37.1
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 1.1e-31 141.7 252 42.5
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 7.0e-31 139.0 313 41.2
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 1.6e-30 137.9 309 37.5
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 2.6e-30 137.1 352 34.4
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 2.2e-29 134.0 337 32.6
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 2.5e-28 130.6 260 44.6
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 4.2e-28 129.8 337 36.8
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 5.5e-28 129.4 282 37.6
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 9.4e-28 128.6 336 34.5
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 1.2e-27 128.3 344 37.2
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 1.6e-27 127.9 344 32.6
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 1.4e-26 124.8 233 42.5
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 1.2e-22 111.7 375 33.1
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 1.6e-22 111.3 358 31.6
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 2.9e-21 107.1 302 32.1
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 7.2e-20 102.4 207 35.7
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 7.2e-20 102.4 301 30.9
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 4.7e-19 99.8 267 31.8
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 1.8e-18 97.8 123 51.2
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 2.2e-16 90.9 345 32.8
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 6.3e-16 89.4 356 29.8
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 4.1e-15 86.7 341 31.1
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 2.0e-14 84.3 264 33.7
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 3.5e-14 83.6 91 56.0
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 7.7e-14 82.4 240 34.2
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 2.5e-12 77.4 111 45.9
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 2.5e-12 77.4 255 37.3
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 4.2e-12 76.6 102 49.0
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 8.0e-11 72.4 136 42.6
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 8.8e-10 68.9 106 48.1
SMO134G0145 Selaginella moellendorffii HOM05D025852 ORTHO05D006058 1.3e-08 65.1 311 24.8
AagrBONN_evm.TU.Sc2ySwM_368.1809 Anthoceros agrestis HOM05D025852 ORTHO05D031190 2.4e-07 60.8 391 27.9
BraA02t04942Z Brassica rapa HOM05D009919 ORTHO05D012044 2.4e-07 60.8 113 37.2
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 9.2e-07 58.9 95 43.2
C02p03410 Brassica napus HOM05D009919 ORTHO05D012044 3.5e-06 57.0 104 39.4
BolC2t06302H Brassica oleracea HOM05D009919 ORTHO05D012044 3.5e-06 57.0 104 39.4


User provided reference genes

Program Settings