Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5334 Papaver somniferum HOM05D004036 ORTHO05D004576 8.5e-120 433.7 224 100.0
PSO782G2888 Papaver somniferum HOM05D004036 ORTHO05D004576 9.7e-116 420.2 224 97.3
Aqoxy7G01846 Aquilegia oxysepala HOM05D004036 ORTHO05D004576 1.3e-16 90.9 186 35.5
TAR624G0048 Trochodendron aralioides HOM05D004036 ORTHO05D004576 5.1e-16 89.0 202 38.1
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 6.7e-16 88.6 181 38.1
Potri.006G246600 Populus trichocarpa HOM05D004036 ORTHO05D004576 6.7e-16 88.6 183 37.2
TAR626G0352 Trochodendron aralioides HOM05D004036 ORTHO05D004576 1.9e-15 87.0 199 36.2
HanXRQChr13g0409481 Helianthus annuus HOM05D004036 ORTHO05D004576 3.3e-15 86.3 174 35.1
Psat6g031000 Pisum sativum HOM05D004036 ORTHO05D004576 1.6e-14 84.0 181 32.6
Cfa013210 Carpinus fangiana HOM05D004036 ORTHO05D004576 2.2e-14 83.6 186 39.2
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 3.7e-14 82.8 183 41.0
Nitab4.5_0006579g0060 Nicotiana tabacum HOM05D004036 ORTHO05D004576 4.8e-14 82.4 192 37.0
Oeu045176.1 Olea europaea HOM05D004036 ORTHO05D004576 4.8e-14 82.4 194 33.5
Nitab4.5_0000125g0270 Nicotiana tabacum HOM05D004036 ORTHO05D004576 8.2e-14 81.6 192 37.0
Duzib187G1985 Durio zibethinus HOM05D004036 ORTHO05D004576 1.1e-13 81.3 196 35.2
arahy.Tifrunner.gnm1.ann1.AAJ54F Arachis hypogaea HOM05D004036 ORTHO05D004576 1.8e-13 80.5 194 36.6
CAN.G21.9 Capsicum annuum HOM05D004036 ORTHO05D004576 1.8e-13 80.5 191 38.2
Sabra06G0192900 Salix brachista HOM05D004036 ORTHO05D004576 1.8e-13 80.5 191 34.6
Ciclev10009480m.g Citrus clementina HOM05D004036 ORTHO05D004576 3.1e-13 79.7 187 35.3
TPR.G20095 Trifolium pratense HOM05D004036 ORTHO05D004576 3.1e-13 79.7 184 33.7
COL.COLO4_24066 Corchorus olitorius HOM05D004036 ORTHO05D004576 5.3e-13 79.0 199 36.7
CANSAT56G2568 Cannabis sativa HOM05D004036 ORTHO05D004576 6.9e-13 78.6 186 38.7
arahy.Tifrunner.gnm1.ann1.7NC9IZ Arachis hypogaea HOM05D004036 ORTHO05D004576 1.5e-12 77.4 192 38.5
Manes.16G068200 Manihot esculenta HOM05D004036 ORTHO05D004576 1.5e-12 77.4 192 38.5
Medtr1g011280 Medicago truncatula HOM05D004036 ORTHO05D004576 3.4e-12 76.3 182 31.9
PGSC0003DMG400033628 Solanum tuberosum HOM05D004036 ORTHO05D004576 3.4e-12 76.3 188 37.2
Duzib150G0431 Durio zibethinus HOM05D004036 ORTHO05D004576 5.9e-12 75.5 194 32.5
MSTRG.14001 Avicennia marina HOM05D004036 ORTHO05D004576 7.7e-12 75.1 198 37.9
MSTRG.1647 Avicennia marina HOM05D004036 ORTHO05D004576 7.7e-12 75.1 199 34.7
Dinv35883 Davidia involucrata HOM05D004036 ORTHO05D004576 7.7e-12 75.1 158 39.2
FAN15G1681 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.0e-11 74.7 202 32.7
SalBow8G4507 Salvia bowleyana HOM05D004036 ORTHO05D004576 1.0e-11 74.7 210 33.3
SalBow8G4816 Salvia bowleyana HOM05D004036 ORTHO05D004576 1.0e-11 74.7 210 33.3
CSS0014753 Camellia sinensis var. sinensis HOM05D004036 ORTHO05D004576 1.7e-11 73.9 147 34.7
DCAR_003061 Daucus carota HOM05D004036 ORTHO05D004576 1.7e-11 73.9 191 35.1
Gohir.D05G011350 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.7e-11 73.9 184 32.1
Gohir.D06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.7e-11 73.9 196 36.7
Peaxi162Scf00105g01426 Petunia axillaris HOM05D004036 ORTHO05D004576 1.7e-11 73.9 199 36.2
Sabra18G0035300 Salix brachista HOM05D004036 ORTHO05D004576 1.7e-11 73.9 197 37.6
Sed0023915 Sechium edule HOM05D004036 ORTHO05D004576 1.7e-11 73.9 199 33.2
TWI63G0992 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 1.7e-11 73.9 181 34.3
Lalb_Chr08g0243781 Lupinus albus HOM05D004036 ORTHO05D004576 2.2e-11 73.6 185 33.5
AT5G25540 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 2.9e-11 73.2 187 33.7
Gorai.009G011700 Gossypium raimondii HOM05D004036 ORTHO05D004576 2.9e-11 73.2 184 35.3
Sopen08g021750 Solanum pennellii HOM05D004036 ORTHO05D004576 2.9e-11 73.2 188 36.2
Gohir.A12G126300 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.8e-11 72.8 186 35.5
Gohir.D09G023175 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.8e-11 72.8 185 35.7
MBI01_g10034_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 3.8e-11 72.8 205 33.7
Solyc08g067810.3 Solanum lycopersicum HOM05D004036 ORTHO05D004576 3.8e-11 72.8 188 36.2
Glyma.14G129200 Glycine max HOM05D004036 ORTHO05D004576 5.0e-11 72.4 193 33.7
Lalb_Chr23g0269031 Lupinus albus HOM05D004036 ORTHO05D004576 5.0e-11 72.4 188 35.1
ClCG05G017210 Citrullus lanatus HOM05D004036 ORTHO05D004576 6.5e-11 72.0 193 34.7
Gohir.A06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 6.5e-11 72.0 196 34.2
TWI34G1922 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 6.5e-11 72.0 180 32.8
Gohir.A05G010600 Gossypium hirsutum HOM05D004036 ORTHO05D004576 8.5e-11 71.6 186 35.5
Atru.chr7.2325 Acer truncatum HOM05D004036 ORTHO05D004576 1.1e-10 71.2 196 35.2
Cc08_g08300 Coffea canephora HOM05D004036 ORTHO05D004576 1.1e-10 71.2 197 35.5
Gohir.A11G185400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.1e-10 71.2 186 34.9
Lsat_1_v5_gn_3_108141 Lactuca sativa HOM05D004036 ORTHO05D004576 1.1e-10 71.2 163 33.1
Phvul.001G055700 Phaseolus vulgaris HOM05D004036 ORTHO05D004576 1.4e-10 70.9 190 34.2
FAN20G2367 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.9e-10 70.5 199 33.2
Gohir.D05G335100 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.9e-10 70.5 186 34.9
Gohir.D09G022200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.9e-10 70.5 186 34.9
Manes.03G064800 Manihot esculenta HOM05D004036 ORTHO05D004576 1.9e-10 70.5 204 31.4
QL12p031289 Quercus lobata HOM05D004036 ORTHO05D004576 1.9e-10 70.5 191 36.1
Thecc.09G144100 Theobroma cacao HOM05D004036 ORTHO05D004576 1.9e-10 70.5 195 34.9
Gorai.008G052900 Gossypium raimondii HOM05D004036 ORTHO05D004576 2.5e-10 70.1 186 34.4
VMungo0647G1622 Vigna mungo HOM05D004036 ORTHO05D004576 2.5e-10 70.1 190 34.7
GSVIVG01015440001 Vitis vinifera HOM05D004036 ORTHO05D004576 2.5e-10 70.1 89 50.6
FAN27G0504 Fragaria x ananassa HOM05D004036 ORTHO05D004576 3.2e-10 69.7 195 34.9
Gohir.D01G158400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.2e-10 69.7 186 35.5
EL10Ac2g02537 Beta vulgaris HOM05D004036 ORTHO05D004576 4.2e-10 69.3 185 32.4
Carub.0006s2340 Capsella rubella HOM05D004036 ORTHO05D004576 4.2e-10 69.3 184 34.2
Haze_21623 Corylus avellana HOM05D004036 ORTHO05D004576 4.2e-10 69.3 228 32.0
Thhalv10004997m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 4.2e-10 69.3 199 33.7
Gorai.004G151900 Gossypium raimondii HOM05D004036 ORTHO05D004576 4.2e-10 69.3 184 35.3
AL6G37340 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 7.2e-10 68.6 196 35.2
FvH4_2g30160 Fragaria vesca HOM05D004036 ORTHO05D004576 7.2e-10 68.6 199 33.2
FAN24G0425 Fragaria x ananassa HOM05D004036 ORTHO05D004576 7.2e-10 68.6 199 33.2
Gohir.D12G195700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 7.2e-10 68.6 186 34.9
CiPaw.08G015700 Carya illinoinensis HOM05D004036 ORTHO05D004576 9.4e-10 68.2 189 34.9
Migut.E01501 Erythranthe guttata HOM05D004036 ORTHO05D004576 1.2e-09 67.8 193 33.7
CiPaw.03G235800 Carya illinoinensis HOM05D004036 ORTHO05D004576 1.6e-09 67.4 105 41.9
ECA240G1837 Erigeron canadensis HOM05D004036 ORTHO05D004576 2.1e-09 67.0 170 30.6
Glyma.17G203900 Glycine max HOM05D004036 ORTHO05D004576 2.1e-09 67.0 195 32.3
RcHm_v2.0_Chr6g0312751 Rosa chinensis HOM05D004036 ORTHO05D004576 2.7e-09 66.6 195 34.9
Gohir.A12G241700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.6e-09 65.9 186 34.4
vmacro05446 Vaccinium macrocarpon HOM05D004036 ORTHO05D004576 6.1e-09 65.5 220 32.3
Nn8g39276 Nelumbo nucifera HOM05D004036 ORTHO05D004576 7.9e-09 65.1 147 35.4
CARHR187840 Cardamine hirsuta HOM05D004036 ORTHO05D004576 1.0e-08 64.7 159 34.0
CsaV3_3G046690 Cucumis sativus L. HOM05D004036 ORTHO05D004576 1.0e-08 64.7 197 32.0
SGA_v2.0_scaffold163G38098 Striga asiatica HOM05D004036 ORTHO05D004576 1.0e-08 64.7 185 36.8
Prupe.7G234300 Prunus persica HOM05D004036 ORTHO05D004576 1.8e-08 63.9 162 34.6
C07p42280 Brassica napus HOM05D004036 ORTHO05D004576 2.3e-08 63.5 184 31.0
Eucgr.C01818 Eucalyptus grandis HOM05D004036 ORTHO05D004576 2.3e-08 63.5 197 34.5
THA.LOC104815044 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 2.3e-08 63.5 167 33.5
A06p36250 Brassica napus HOM05D004036 ORTHO05D004576 3.0e-08 63.2 184 31.5
BraA06t26547Z Brassica rapa HOM05D004036 ORTHO05D004576 3.0e-08 63.2 184 31.5
Prupe.1G466700 Prunus persica HOM05D004036 ORTHO05D004576 3.0e-08 63.2 192 33.9
Sc23g0007020 Simmondsia chinensis HOM05D004036 ORTHO05D004576 3.0e-08 63.2 131 33.6
QL02p086217 Quercus lobata HOM05D004036 ORTHO05D004576 3.9e-08 62.8 205 30.7
MD08G1136600 Malus domestica HOM05D004036 ORTHO05D004576 6.7e-08 62.0 68 51.5
Sp2g22000 Schrenkiella parvula HOM05D004036 ORTHO05D004576 6.7e-08 62.0 185 29.2
Lj5g0012132 Lotus japonicus HOM05D004036 ORTHO05D004576 1.5e-07 60.8 198 30.3
Ah.12g063370 Amaranthus hybridus HOM05D004036 ORTHO05D004576 3.3e-07 59.7 153 35.9
THA.LOC104799217 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 4.4e-07 59.3 195 28.7
AUR62032381 Chenopodium quinoa HOM05D004036 ORTHO05D004576 5.7e-07 58.9 173 31.2
HanXRQChr03g0077811 Helianthus annuus HOM05D004036 ORTHO05D004576 5.7e-07 58.9 92 42.4
BolC7t44757H Brassica oleracea HOM05D004036 ORTHO05D004576 7.4e-07 58.5 191 29.3
Cpa.g.sc91.6 Carica papaya HOM05D004036 ORTHO05D004576 9.7e-07 58.2 141 36.2
PGR031G0366 Punica granatum HOM05D004036 ORTHO05D004576 9.7e-07 58.2 204 31.9
Aa31LG11G4630 Aethionema arabicum HOM05D004036 ORTHO05D004576 1.3e-06 57.8 183 30.6
TAR383G0233 Trochodendron aralioides HOM05D004036 ORTHO05D004576 1.7e-06 57.4 146 33.6
AUR62024838 Chenopodium quinoa HOM05D004036 ORTHO05D004576 2.2e-06 57.0 90 36.7
Nn2g11835 Nelumbo nucifera HOM05D004036 ORTHO05D004576 2.2e-06 57.0 196 28.6
MELO3C003669.2 Cucumis melo HOM05D004036 ORTHO05D004576 2.8e-06 56.6 142 33.1
Gohir.A07G032200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.8e-06 56.6 131 31.3
Gohir.A08G237500 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.8e-06 56.6 131 31.3
Aa31LG3G15750 Aethionema arabicum HOM05D004036 ORTHO05D004576 6.3e-06 55.5 178 32.6
Gorai.010G053700 Gossypium raimondii HOM05D004036 ORTHO05D004576 8.2e-06 55.1 140 34.3


User provided reference genes

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