Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 8.2e-100 367.1 189 100.0
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.2e-55 220.3 194 60.3
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.6e-53 212.6 194 58.8
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 1.3e-52 210.3 177 62.1
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 4.9e-52 208.4 189 57.1
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 1.4e-51 206.8 177 60.5
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 1.9e-51 206.5 181 58.0
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 2.4e-51 206.1 185 57.8
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 4.1e-51 205.3 177 59.9
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 5.4e-51 204.9 181 59.1
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 9.2e-51 204.1 164 63.4
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 1.2e-50 203.8 175 60.6
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 1.2e-50 203.8 177 57.1
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 2.1e-50 203.0 178 57.3
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 4.6e-50 201.8 168 60.7
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 6.0e-50 201.4 195 53.3
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.0e-49 200.7 175 58.9
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.3e-49 200.3 190 56.3
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.3e-49 200.3 189 55.6
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.7e-49 199.9 159 64.2
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.7e-49 199.9 189 55.6
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 3.9e-49 198.7 177 59.3
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 3.9e-49 198.7 181 56.4
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 6.6e-49 198.0 189 55.0
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 6.6e-49 198.0 184 58.2
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 6.6e-49 198.0 191 56.5
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 8.6e-49 197.6 184 58.2
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 8.6e-49 197.6 174 58.6
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 1.5e-48 196.8 200 52.5
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.5e-48 196.8 184 54.3
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.5e-48 196.8 184 58.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 4.3e-48 195.3 164 60.4
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 5.6e-48 194.9 183 55.2
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 1.6e-47 193.4 193 53.9
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.6e-47 193.4 190 55.8
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 2.1e-47 193.0 179 55.9
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 2.1e-47 193.0 162 63.0
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 2.1e-47 193.0 194 55.7
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 3.6e-47 192.2 168 60.7
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 4.7e-47 191.8 190 54.2
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 4.7e-47 191.8 172 56.4
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 8.1e-47 191.0 164 60.4
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 1.1e-46 190.7 205 52.2
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 1.4e-46 190.3 168 61.3
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.8e-46 189.9 173 56.6
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 1.8e-46 189.9 174 57.5
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 4.0e-46 188.7 171 59.6
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 5.2e-46 188.3 169 58.0
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 8.9e-46 187.6 209 49.3
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 8.9e-46 187.6 176 55.1
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 8.9e-46 187.6 199 52.3
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 1.2e-45 187.2 195 52.3
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 2.0e-45 186.4 186 53.2
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 3.4e-45 185.7 174 56.9
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 9.9e-45 184.1 164 60.4
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.7e-44 183.3 173 55.5
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.7e-44 183.3 245 45.7
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 2.9e-44 182.6 174 56.9
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 2.9e-44 182.6 178 55.6
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 2.9e-44 182.6 173 57.2
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 3.8e-44 182.2 176 54.5
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.1e-43 180.6 176 54.0
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 1.9e-43 179.9 185 51.4
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 1.9e-43 179.9 185 50.8
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 3.2e-43 179.1 163 56.4
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 3.2e-43 179.1 196 54.6
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 4.2e-43 178.7 176 53.4
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 4.2e-43 178.7 188 52.1
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 4.2e-43 178.7 175 53.7
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 7.1e-43 177.9 174 56.3
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 9.2e-43 177.6 171 55.6
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.2e-42 177.2 162 58.0
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 2.7e-42 176.0 175 52.6
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 2.7e-42 176.0 176 51.1
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 7.8e-42 174.5 192 52.1
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 2.3e-41 172.9 167 53.9
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 3.9e-41 172.2 174 55.7
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 4.3e-40 168.7 174 55.7
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.2e-39 167.2 183 49.7
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 2.1e-39 166.4 172 51.2
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 8.1e-39 164.5 163 52.1
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 3.1e-38 162.5 183 48.1
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 9.0e-38 161.0 178 49.4
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.5e-37 160.2 198 48.5
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 3.4e-37 159.1 169 51.5
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 3.4e-37 159.1 178 48.9
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 4.4e-37 158.7 175 49.7
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 9.9e-37 157.5 176 50.0
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.7e-36 156.8 178 48.3
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 4.9e-36 155.2 169 50.9
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 4.9e-36 155.2 178 48.9
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 8.4e-36 154.5 179 48.6
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 8.4e-36 154.5 179 48.6
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 3.2e-35 152.5 158 53.2
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.2e-34 150.6 188 49.5
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.2e-34 150.6 154 51.3
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 1.7e-33 146.7 179 51.4
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 1.7e-33 146.7 179 51.4
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 6.6e-33 144.8 167 51.5
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 8.7e-33 144.4 176 50.6
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 1.5e-32 143.7 174 48.3
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 5.6e-32 141.7 176 50.0
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 9.6e-32 141.0 176 49.4
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.3e-31 140.6 178 46.1
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 1.4e-30 137.1 111 63.1
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.4e-30 136.3 127 55.1
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 6.4e-28 128.3 167 47.3
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 2.5e-24 116.3 173 42.8
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.4e-19 100.5 83 61.4
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 4.2e-19 99.0 83 61.4
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 1.6e-18 97.1 185 38.9
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 3.0e-17 92.8 173 35.3
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.9e-16 90.1 99 49.5
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.0e-12 77.8 173 34.1
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 6.3e-07 58.5 102 37.3


User provided reference genes

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