Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 0.0e+00 1118.6 572 100.0
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 0.0e+00 1082.4 572 96.5
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 2.6e-245 852.0 572 76.4
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 1.0e-238 830.1 571 74.6
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 5.3e-235 817.8 575 73.0
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.2e-234 816.6 571 73.2
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 1.2e-231 806.6 574 72.3
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 2.3e-230 802.4 575 71.5
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 6.7e-230 800.8 501 78.8
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.7e-228 796.2 572 72.2
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 2.2e-228 795.8 500 78.0
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.2e-228 795.8 570 70.9
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.2e-228 795.8 570 70.9
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 6.3e-228 794.3 570 70.5
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.4e-227 793.1 572 72.7
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 3.1e-227 792.0 569 71.9
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 7.0e-227 790.8 570 70.9
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.6e-226 789.6 574 70.9
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 3.5e-226 788.5 502 78.5
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 1.1e-224 783.5 505 77.8
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 7.2e-224 780.8 573 70.9
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 1.2e-223 780.0 571 70.8
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 2.1e-223 779.2 499 77.2
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.6e-223 778.5 501 77.6
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 3.6e-223 778.5 493 77.9
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.3e-222 775.8 502 77.9
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 3.0e-222 775.4 574 70.7
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 1.2e-221 773.5 573 71.0
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 1.5e-221 773.1 574 68.8
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 1.5e-221 773.1 574 69.5
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.0e-221 772.7 581 68.5
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 3.4e-221 771.9 570 69.5
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 3.4e-221 771.9 501 77.6
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 4.4e-221 771.5 576 70.1
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 4.4e-221 771.5 588 68.7
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 1.3e-220 770.0 493 77.7
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 6.3e-220 767.7 556 70.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 1.1e-219 766.9 514 75.1
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 1.1e-219 766.9 575 69.0
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 1.1e-219 766.9 582 69.1
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 1.4e-219 766.5 502 76.9
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 1.4e-219 766.5 570 67.9
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 3.1e-219 765.4 580 68.3
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 1.2e-218 763.5 567 69.5
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 2.0e-218 762.7 565 69.7
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 1.0e-217 760.4 572 67.7
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.3e-217 760.0 568 70.2
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 8.6e-217 757.3 474 78.9
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 4.2e-216 755.0 492 75.4
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 7.2e-216 754.2 584 68.2
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.6e-215 753.1 573 68.4
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 2.1e-215 752.7 576 67.4
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 2.1e-215 752.7 493 75.3
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 2.8e-215 752.3 591 67.3
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 3.6e-215 751.9 590 68.1
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 3.6e-215 751.9 504 72.4
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 4.7e-215 751.5 585 68.2
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 4.7e-215 751.5 578 67.0
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 1.4e-214 750.0 585 68.2
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 2.3e-214 749.2 576 68.2
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 4.0e-214 748.4 577 67.1
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 8.9e-214 747.3 590 67.6
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 2.0e-213 746.1 564 68.8
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 2.0e-213 746.1 504 73.8
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 3.4e-213 745.3 489 75.3
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 7.5e-213 744.2 502 72.9
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 1.7e-212 743.0 573 66.5
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 6.3e-212 741.1 561 68.8
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.1e-211 740.3 580 65.7
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 2.4e-211 739.2 569 68.2
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 3.1e-211 738.8 504 73.4
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 7.0e-211 737.6 570 66.0
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 1.2e-210 736.9 577 67.2
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 2.0e-210 736.1 569 66.6
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 2.0e-210 736.1 569 66.6
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 1.0e-209 733.8 566 68.4
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 5.0e-209 731.5 568 67.3
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 4.3e-208 728.4 571 65.8
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.1e-207 726.1 486 73.7
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 2.8e-207 725.7 551 67.7
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.8e-207 725.7 486 73.5
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.0e-206 723.8 506 72.5
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 2.3e-206 722.6 449 80.8
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 2.3e-206 722.6 550 66.5
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 5.2e-206 721.5 570 65.8
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 5.2e-206 721.5 487 72.9
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.2e-204 716.1 467 74.7
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 3.7e-204 715.3 569 64.5
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.1e-203 713.8 515 71.3
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.7e-202 709.1 558 66.1
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 7.8e-202 707.6 560 65.2
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.3e-201 706.1 437 78.9
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 5.6e-200 701.4 492 70.3
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 2.1e-199 699.5 569 63.8
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 4.7e-199 698.4 470 72.3
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.8e-198 696.4 484 72.9
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 5.2e-198 694.9 558 64.7
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 3.5e-194 682.2 492 70.5
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 3.1e-190 669.1 482 67.8
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 9.9e-189 664.1 491 64.4
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.9e-188 662.5 482 67.2
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.9e-188 662.5 482 67.2
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 2.7e-186 656.0 409 78.0
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 1.5e-184 650.2 569 62.0
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 3.6e-183 645.6 477 69.6
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 2.9e-180 636.0 462 67.5
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 7.1e-179 631.3 571 59.9
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 9.2e-179 630.9 444 72.3
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 1.7e-177 626.7 477 64.2
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 2.8e-175 619.4 460 66.3
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 4.6e-170 602.1 393 75.8
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 4.6e-170 602.1 488 62.3
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 1.4e-163 580.5 476 57.1
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.9e-160 570.1 476 58.6
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.6e-159 567.0 475 58.5
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 9.0e-158 561.2 487 57.7
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.9e-144 516.9 446 63.2
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 5.9e-141 505.4 475 52.4
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 5.1e-137 492.3 372 69.9
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 2.4e-134 483.4 318 77.0
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.6e-130 470.7 328 72.3
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 2.9e-124 449.9 512 45.9
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 5.7e-120 435.6 490 46.7
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 3.9e-68 263.5 163 76.7
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.2e-56 225.3 480 30.6
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 2.7e-53 214.2 144 73.6
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 3.5e-37 160.6 105 71.4
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 2.5e-35 154.5 450 26.0
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 4.6e-29 133.7 71 88.7
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.1e-25 122.5 80 83.8
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 1.1e-19 102.4 427 25.1
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 1.0e-15 89.4 62 69.4
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 2.3e-12 78.2 428 25.7
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 4.2e-06 57.4 28 89.3


User provided reference genes

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