Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 5.5e-116 421.0 217 100.0
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 3.0e-114 415.2 217 98.6
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.7e-94 349.0 209 82.8
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.3e-93 346.7 208 82.7
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.9e-93 345.5 207 82.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 6.6e-93 344.4 208 81.2
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 6.6e-93 344.4 216 79.2
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.6e-93 344.4 217 79.3
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.1e-92 343.6 208 81.2
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.9e-92 342.8 215 79.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.9e-92 342.8 208 81.2
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.9e-92 342.8 217 78.8
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.9e-92 342.8 217 78.8
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 3.3e-92 342.0 214 80.4
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 5.6e-92 341.3 208 81.7
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 7.3e-92 340.9 207 81.2
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 9.5e-92 340.5 208 82.2
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.2e-91 340.1 214 79.9
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.6e-91 339.7 208 81.2
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 3.6e-91 338.6 207 81.2
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 4.7e-91 338.2 215 80.5
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 4.7e-91 338.2 215 80.5
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 6.1e-91 337.8 207 81.2
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.1e-91 337.8 208 81.2
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 8.0e-91 337.4 208 81.2
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 8.0e-91 337.4 208 80.3
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.0e-90 337.0 208 79.3
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.4e-90 336.7 208 80.8
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.4e-90 336.7 210 80.5
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.4e-90 336.7 208 79.8
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.8e-90 336.3 212 78.8
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.8e-90 336.3 212 78.8
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.3e-90 335.9 208 81.2
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 2.3e-90 335.9 208 80.3
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 4.0e-90 335.1 208 80.8
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 4.0e-90 335.1 208 79.8
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 5.2e-90 334.7 207 81.6
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 5.2e-90 334.7 208 81.2
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 8.9e-90 334.0 216 76.9
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.5e-89 333.2 208 80.3
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.5e-89 333.2 208 79.8
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.5e-89 333.2 207 80.2
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 3.4e-89 332.0 208 78.8
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.4e-89 331.6 208 78.4
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 5.7e-89 331.3 210 79.0
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 5.7e-89 331.3 208 79.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 5.7e-89 331.3 207 79.2
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 7.5e-89 330.9 207 79.2
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.3e-88 330.1 213 76.5
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.7e-88 329.7 208 77.4
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.7e-88 329.7 207 76.8
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 1.7e-88 329.7 225 76.4
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.7e-88 329.7 208 77.4
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.7e-88 329.7 208 77.4
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.2e-88 329.3 216 75.5
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.9e-88 328.9 208 77.4
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.7e-88 328.6 207 78.3
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 6.4e-88 327.8 208 78.8
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 6.4e-88 327.8 214 74.8
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.4e-87 326.6 236 71.2
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.4e-87 326.6 236 71.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.4e-87 326.6 211 77.7
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 2.4e-87 325.9 213 75.6
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 2.4e-87 325.9 212 75.0
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.4e-87 325.9 208 77.9
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 2.4e-87 325.9 208 76.0
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 9.2e-87 323.9 241 71.8
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.6e-86 323.2 206 77.7
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.7e-86 322.4 200 79.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.5e-86 322.0 212 74.5
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 5.9e-86 321.2 208 75.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.3e-85 320.1 208 74.5
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.9e-85 318.5 209 76.1
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 8.6e-85 317.4 205 78.0
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.9e-84 316.2 193 79.3
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 3.3e-84 315.5 207 73.4
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 7.3e-84 314.3 193 79.3
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.8e-82 309.7 234 68.8
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.3e-82 309.3 193 77.7
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 4.0e-82 308.5 196 78.1
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 5.2e-82 308.1 193 79.3
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 5.8e-81 304.7 212 74.1
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 9.8e-81 303.9 193 75.6
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 3.7e-80 302.0 208 74.5
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 2.4e-79 299.3 208 75.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.1e-79 298.5 208 74.0
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 3.9e-77 292.0 183 79.8
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 5.0e-77 291.6 193 74.1
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 3.3e-76 288.9 197 73.6
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.6e-76 288.1 207 68.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.8e-75 285.8 214 67.3
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 6.8e-74 281.2 206 65.0
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.2e-71 272.3 207 64.7
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.1e-71 271.9 207 65.2
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.3e-69 266.2 208 69.7
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.5e-68 263.5 170 78.2
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 4.3e-68 261.9 202 69.8
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.6e-67 260.0 175 75.4
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.5e-65 253.4 223 61.4
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 4.4e-65 251.9 173 73.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.4e-63 246.1 213 61.5
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.0e-61 239.2 154 79.9
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 4.4e-57 225.3 141 77.3
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.1e-54 216.5 187 64.2
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.7e-54 216.1 137 81.0
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.6e-51 206.8 138 79.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 7.1e-47 191.4 139 70.5
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.3e-43 180.6 113 82.3
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-39 167.5 120 71.7
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.8e-35 152.9 136 61.8
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 8.1e-35 151.4 114 68.4
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.0e-34 149.1 86 79.1
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 8.4e-32 141.4 108 68.5
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 5.5e-31 138.7 204 37.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 7.9e-30 134.8 197 38.1
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 2.1e-27 126.7 212 37.7
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 3.0e-21 106.3 85 67.1
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 3.9e-21 105.9 101 59.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 6.7e-21 105.1 101 58.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 4.8e-19 99.0 111 51.4
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.2e-17 94.4 71 53.5
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 8.8e-13 78.2 40 80.0
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 3.8e-08 62.8 46 67.4


User provided reference genes

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