Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 5.7e-50 200.7 105 100.0
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 2.8e-41 171.8 105 90.5
PSO339G0117 Papaver somniferum HOM05D007293 ORTHO05D009143 5.0e-30 134.4 91 83.5
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 2.4e-16 89.0 107 57.0
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 1.4e-11 73.2 100 51.0
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 1.8e-11 72.8 106 51.9
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 5.2e-11 71.2 105 49.5
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 8.8e-11 70.5 100 55.0
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 2.0e-10 69.3 42 83.3
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 3.4e-10 68.6 105 46.7
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 4.4e-10 68.2 68 60.3
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 5.7e-10 67.8 66 62.1
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 7.5e-10 67.4 102 52.9
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 9.8e-10 67.0 101 50.5
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.3e-09 66.6 97 51.5
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 1.3e-09 66.6 89 51.7
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 2.2e-09 65.9 100 54.0
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 3.7e-09 65.1 98 51.0
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 4.9e-09 64.7 81 53.1
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 4.9e-09 64.7 96 51.0
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 4.9e-09 64.7 102 52.0
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 1.4e-08 63.2 65 58.5
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.8e-08 62.8 99 45.5
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 2.4e-08 62.4 103 51.5
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 3.1e-08 62.0 100 49.0
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 3.1e-08 62.0 99 44.4
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 3.1e-08 62.0 97 49.5
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.1e-08 61.6 101 46.5
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 4.1e-08 61.6 100 48.0
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 4.1e-08 61.6 102 50.0
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 5.4e-08 61.2 100 45.0
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 5.4e-08 61.2 98 51.0
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 9.2e-08 60.5 101 46.5
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 9.2e-08 60.5 69 58.0
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 9.2e-08 60.5 100 47.0
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.2e-07 60.1 100 48.0
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 1.2e-07 60.1 93 45.2
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 1.6e-07 59.7 51 62.7
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 1.6e-07 59.7 98 46.9
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 1.6e-07 59.7 92 48.9
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 2.0e-07 59.3 100 47.0
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 2.7e-07 58.9 102 45.1
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.7e-07 58.9 100 47.0
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.5e-07 58.5 108 42.6
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 4.5e-07 58.2 98 49.0
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 5.9e-07 57.8 100 46.0
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 5.9e-07 57.8 97 44.3
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 5.9e-07 57.8 99 46.5
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.7e-07 57.4 98 42.9
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 7.7e-07 57.4 98 43.9
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 7.7e-07 57.4 90 44.4
ATR0730G001 Amborella trichopoda HOM05D007293 ORTHO05D009143 1.0e-06 57.0 96 43.8
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.0e-06 57.0 99 43.4
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 1.7e-06 56.2 101 45.5
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 1.7e-06 56.2 100 46.0
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 2.9e-06 55.5 46 67.4
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.8e-06 55.1 97 44.3
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 3.8e-06 55.1 46 67.4
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 5.0e-06 54.7 101 45.5
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 5.0e-06 54.7 97 47.4
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 6.6e-06 54.3 107 45.8
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 6.6e-06 54.3 107 45.8
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 8.6e-06 53.9 101 44.6
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 8.6e-06 53.9 101 45.5


User provided reference genes

Program Settings