Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 0.0e+00 1377.5 703 100.0
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 0.0e+00 1342.0 703 97.6
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 4.1e-152 542.7 746 47.9
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.1e-136 491.5 729 45.3
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.3e-131 473.8 873 38.7
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 7.0e-128 462.2 735 43.0
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.2e-122 444.9 726 42.6
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 9.2e-120 435.3 907 37.4
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.8e-116 423.7 741 39.7
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 5.9e-111 406.0 796 38.1
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 9.5e-109 398.7 774 38.6
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 2.8e-108 397.1 733 39.6
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 1.9e-104 384.4 745 37.9
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 3.2e-104 383.6 751 38.5
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 2.7e-103 380.6 770 37.3
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 3.9e-102 376.7 754 36.3
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 3.9e-102 376.7 749 36.8
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 5.0e-102 376.3 744 37.6
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 1.6e-100 371.3 732 38.9
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 1.2e-95 355.1 738 37.5
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 3.5e-95 353.6 748 36.0
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 1.0e-94 352.1 740 36.6
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.7e-94 351.3 771 36.6
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 3.9e-94 350.1 771 36.8
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 9.5e-93 345.5 747 36.9
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 6.8e-91 339.3 737 37.2
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 7.6e-90 335.9 766 36.4
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 1.9e-88 331.3 769 36.5
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 6.0e-87 326.2 694 36.3
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 7.8e-87 325.9 768 35.4
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 3.3e-85 320.5 743 36.1
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 4.3e-85 320.1 763 35.9
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 3.4e-82 310.5 766 35.2
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 2.2e-81 307.8 735 36.1
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 6.4e-81 306.2 762 34.1
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 9.3e-80 302.4 734 35.6
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 8.7e-78 295.8 753 32.1
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 2.5e-77 294.3 765 34.2
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 5.6e-77 293.1 752 31.9
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 7.3e-77 292.7 750 33.2
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 1.6e-76 291.6 760 34.2
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 2.1e-76 291.2 742 34.4
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 2.8e-76 290.8 765 33.6
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 6.2e-76 289.7 742 32.7
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 1.1e-75 288.9 802 33.3
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 2.4e-75 287.7 760 34.1
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 3.1e-75 287.3 743 33.2
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 3.1e-75 287.3 739 33.0
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 9.0e-75 285.8 751 32.0
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 1.2e-74 285.4 741 33.6
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.7e-73 281.6 751 34.6
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.9e-73 280.8 740 33.8
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 8.4e-73 279.3 743 33.1
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 9.3e-72 275.8 753 30.9
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 9.3e-72 275.8 748 33.4
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 3.5e-71 273.9 749 33.2
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 6.0e-71 273.1 726 33.3
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.1e-69 268.9 754 31.8
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 2.5e-69 267.7 755 31.1
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 9.6e-69 265.8 746 31.4
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.3e-68 265.4 727 33.1
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 4.8e-68 263.5 765 32.2
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 8.1e-68 262.7 741 33.6
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.4e-67 261.2 739 30.6
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.1e-67 260.8 765 31.9
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 8.4e-65 252.7 753 31.3
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 1.1e-64 252.3 738 30.8
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.4e-64 251.9 738 32.2
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.1e-63 248.1 719 31.7
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 4.6e-63 246.9 743 31.9
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.3e-62 244.6 750 31.5
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 5.1e-62 243.4 746 30.4
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 6.7e-62 243.0 746 30.0
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 1.5e-61 241.9 741 30.8
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 1.4e-59 235.3 724 31.2
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 3.4e-58 230.7 764 30.5
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.1e-56 225.7 792 29.8
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 7.9e-55 219.5 707 31.5
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 1.0e-54 219.2 748 31.4
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 3.3e-53 214.2 710 29.6
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 4.3e-53 213.8 693 31.7
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 5.7e-53 213.4 698 31.4
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 7.4e-53 213.0 688 31.5
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 1.3e-52 212.2 682 30.5
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.8e-51 208.4 708 29.8
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 6.9e-51 206.5 737 29.9
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.2e-50 205.7 706 30.9
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 4.5e-50 203.8 512 31.4
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 5.9e-50 203.4 708 31.4
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 2.2e-49 201.4 723 29.9
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 3.8e-49 200.7 764 30.0
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 4.2e-48 197.2 816 29.2
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 7.2e-48 196.4 695 29.2
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 9.3e-48 196.1 713 30.4
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 1.2e-47 195.7 748 31.0
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 6.7e-46 189.9 712 31.3
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 1.1e-45 189.1 743 30.4
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 1.9e-45 188.3 725 29.2
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 5.7e-45 186.8 718 28.0
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.3e-41 175.6 712 29.1
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 2.9e-41 174.5 769 28.3
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 4.2e-40 170.6 687 28.5
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 1.1e-37 162.5 741 28.7
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 1.5e-37 162.2 262 44.7
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 1.4e-35 155.6 181 50.3
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 1.2e-34 152.5 707 27.9
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 1.7e-33 148.7 785 26.2
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 3.8e-33 147.5 770 26.0
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 2.1e-31 141.7 123 53.7
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 1.4e-30 139.0 776 27.4
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 2.0e-29 135.2 778 27.1
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 4.1e-27 127.5 787 25.7
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 9.1e-27 126.3 734 26.8
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 2.0e-26 125.2 781 24.8
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 7.7e-26 123.2 778 25.8
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 6.5e-25 120.2 679 26.1
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 2.5e-24 118.2 679 26.2
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.0e-22 112.8 790 25.2
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 4.0e-22 110.9 281 33.5
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 2.6e-21 108.2 754 25.5
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 4.4e-21 107.5 754 25.2
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 7.5e-21 106.7 775 25.2
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 7.5e-21 106.7 775 25.2
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 1.7e-20 105.5 753 24.8
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 7.0e-19 100.1 605 26.1
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 4.5e-18 97.4 694 25.5
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 4.5e-18 97.4 694 25.5
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 1.7e-17 95.5 664 26.8
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 1.0e-14 86.3 220 31.8
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 2.0e-13 82.0 560 25.7
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 7.0e-11 73.6 223 26.5
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 1.7e-09 68.9 756 23.1
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 3.2e-08 64.7 305 30.5
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 3.2e-08 64.7 806 23.0
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 9.5e-08 63.2 240 31.2


User provided reference genes

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