Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 3.0e-76 288.5 153 100.0
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 4.1e-73 278.1 154 97.4
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.1e-38 163.7 153 60.8
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.1e-38 163.7 153 60.8
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.9e-38 162.9 153 60.8
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 2.5e-38 162.5 153 63.4
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 2.5e-38 162.5 145 65.5
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 4.3e-38 161.8 150 60.0
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 7.3e-38 161.0 151 60.3
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 7.3e-38 161.0 151 59.6
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 9.5e-38 160.6 151 61.6
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 3.6e-37 158.7 146 60.3
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 4.7e-37 158.3 149 59.1
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 6.1e-37 157.9 149 62.4
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 8.0e-37 157.5 149 62.4
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.4e-36 156.8 156 60.3
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.3e-36 156.0 151 62.3
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.0e-36 155.6 153 57.5
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.0e-36 155.6 151 61.6
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 4.0e-36 155.2 149 59.1
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 4.0e-36 155.2 151 60.3
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 5.2e-36 154.8 156 60.9
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 5.2e-36 154.8 149 59.7
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 6.8e-36 154.5 149 60.4
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 8.9e-36 154.1 149 61.1
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 8.9e-36 154.1 146 58.9
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 8.9e-36 154.1 158 57.6
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-35 153.3 146 60.3
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 2.0e-35 152.9 153 58.8
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 2.0e-35 152.9 149 59.1
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 2.6e-35 152.5 147 59.9
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 5.7e-35 151.4 147 57.8
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 9.8e-35 150.6 158 58.9
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 9.8e-35 150.6 153 56.9
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 2.9e-34 149.1 152 53.9
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.4e-33 146.7 149 56.4
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.8e-33 146.4 144 58.3
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 1.8e-33 146.4 149 59.7
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.8e-33 146.4 146 57.5
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.8e-33 146.4 145 57.2
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.8e-33 146.4 145 59.3
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 2.4e-33 146.0 146 57.5
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 3.2e-33 145.6 146 55.5
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.2e-33 145.6 149 55.7
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 3.2e-33 145.6 149 55.7
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 5.4e-33 144.8 149 55.7
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 5.4e-33 144.8 150 56.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 7.0e-33 144.4 150 58.7
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 9.2e-33 144.1 151 54.3
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.2e-32 143.7 149 55.7
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.2e-32 143.7 148 56.8
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 1.6e-32 143.3 146 55.5
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.6e-32 143.3 146 55.5
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 1.6e-32 143.3 154 56.5
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 2.0e-32 142.9 153 54.2
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 2.0e-32 142.9 149 53.7
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.7e-32 142.5 144 54.9
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 3.5e-32 142.1 152 55.3
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 3.5e-32 142.1 146 56.2
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 3.5e-32 142.1 144 54.9
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 4.6e-32 141.7 149 59.1
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 7.8e-32 141.0 148 57.4
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 7.8e-32 141.0 144 60.4
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.0e-31 140.6 146 55.5
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 1.3e-31 140.2 149 53.7
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.7e-31 139.8 146 54.8
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 2.3e-31 139.4 148 57.4
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.3e-31 139.4 147 55.1
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 3.0e-31 139.0 149 53.7
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 3.0e-31 139.0 149 53.7
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 5.0e-31 138.3 152 52.6
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 5.0e-31 138.3 145 54.5
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 6.6e-31 137.9 153 51.6
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 1.1e-30 137.1 149 55.0
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 1.9e-30 136.3 163 49.7
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.9e-30 136.3 144 54.2
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.9e-30 136.3 140 58.6
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 1.9e-30 136.3 146 54.8
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 4.3e-30 135.2 149 52.3
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 5.6e-30 134.8 136 57.4
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.6e-30 134.8 143 55.2
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 5.6e-30 134.8 151 52.3
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 5.6e-30 134.8 149 53.7
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 7.3e-30 134.4 149 52.3
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 7.3e-30 134.4 145 51.0
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 9.5e-30 134.0 148 54.7
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.6e-29 133.3 135 57.0
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.6e-29 133.3 136 54.4
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 2.1e-29 132.9 149 51.0
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 8.0e-29 131.0 148 51.4
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.0e-28 130.6 150 53.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 1.0e-28 130.6 157 50.3
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.8e-28 129.8 148 53.4
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 2.0e-27 126.3 138 55.1
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 3.4e-27 125.6 145 53.1
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 3.4e-27 125.6 145 53.1
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 3.4e-27 125.6 146 52.1
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 4.4e-27 125.2 136 54.4
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 5.8e-27 124.8 136 55.1
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 7.5e-27 124.4 145 51.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 4.9e-26 121.7 145 51.0
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 6.4e-26 121.3 145 51.0
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.6e-24 116.7 145 47.6
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 2.0e-24 116.3 148 47.3
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 4.6e-24 115.2 143 49.0
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 6.0e-24 114.8 148 47.3
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 7.8e-24 114.4 144 49.3
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.0e-23 114.0 142 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 3.9e-23 112.1 145 48.3
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 5.0e-23 111.7 143 48.3
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 5.0e-23 111.7 143 48.3
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 5.0e-23 111.7 143 48.3
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 5.0e-23 111.7 143 48.3
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.8e-20 103.2 125 50.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 5.2e-20 101.7 144 43.1
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 6.8e-20 101.3 141 45.4
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 2.2e-18 96.3 144 45.1
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 4.9e-18 95.1 132 47.0
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 8.3e-18 94.4 124 47.6
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 3.2e-17 92.4 144 40.3
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 4.1e-17 92.0 127 46.5
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 4.3e-14 82.0 146 37.7
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.8e-12 76.6 65 61.5
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.9e-10 69.3 55 56.4
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 4.9e-10 68.6 48 68.8
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.4e-09 67.0 48 68.8
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 4.1e-09 65.5 102 40.2
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.2e-08 63.9 145 32.4
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 7.8e-08 61.2 44 65.9
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.3e-07 59.7 53 56.6


User provided reference genes

Program Settings