Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 1.6e-265 919.5 725 100.0
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 9.5e-229 797.3 725 77.4
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 1.4e-94 351.7 703 42.7
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 7.3e-88 329.3 717 44.6
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 1.0e-81 308.9 719 44.6
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 7.8e-74 282.7 678 39.5
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 3.1e-70 270.8 724 46.7
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 1.2e-69 268.9 719 43.9
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 2.2e-68 264.6 702 39.2
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 1.1e-64 252.3 718 31.8
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 3.6e-63 247.3 681 29.5
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 6.9e-62 243.0 710 36.8
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 4.6e-58 230.3 718 32.6
Gohir.A09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 3.0e-57 227.6 528 32.0
Gohir.D05G129000 Gossypium hirsutum HOM05D004642 ORTHO05D005466 5.1e-57 226.9 484 34.9
Gorai.009G133100 Gossypium raimondii HOM05D004642 ORTHO05D005466 8.7e-57 226.1 484 33.9
Gorai.006G098800 Gossypium raimondii HOM05D004642 ORTHO05D005466 3.7e-55 220.7 520 32.7
Gohir.A05G129515 Gossypium hirsutum HOM05D004642 ORTHO05D005466 6.2e-55 219.9 481 33.9
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 1.1e-54 219.2 688 44.0
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 3.1e-54 217.6 707 33.0
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 9.0e-54 216.1 671 43.4
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 1.5e-53 215.3 492 33.3
Gohir.D09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 2.0e-53 214.9 516 32.2
MELO3C024228.2 Cucumis melo HOM05D004642 ORTHO05D005466 4.5e-53 213.8 422 35.1
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 6.4e-52 209.9 787 37.1
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 1.4e-51 208.8 628 32.5
Glyma.11G187500 Glycine max HOM05D004642 ORTHO05D005466 4.2e-51 207.2 694 41.4
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 4.2e-51 207.2 715 45.0
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 5.5e-51 206.8 623 42.7
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 1.2e-50 205.7 480 32.9
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 1.8e-49 201.8 426 38.0
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 1.9e-48 198.4 664 32.1
ClCG09G002170 Citrullus lanatus HOM05D004642 ORTHO05D005466 2.1e-47 194.9 388 32.7
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 3.7e-47 194.1 758 34.3
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 1.1e-46 192.6 680 40.7
Aa31LG8G3170 Aethionema arabicum HOM05D004642 ORTHO05D005466 1.8e-46 191.8 424 34.7
CsaV3_7G033140 Cucumis sativus L. HOM05D004642 ORTHO05D005466 3.1e-46 191.0 422 32.0
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 4.0e-46 190.7 677 35.2
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 4.0e-46 190.7 761 31.9
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 5.3e-46 190.3 700 42.4
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 6.9e-46 189.9 689 26.9
Thhalv10020153m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 2.0e-45 188.3 431 33.9
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 1.3e-44 185.7 709 34.8
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 2.2e-44 184.9 425 32.5
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 5.0e-44 183.7 735 37.3
SGA_v2.0_scaffold4G01996 Striga asiatica HOM05D004642 ORTHO05D005466 5.5e-43 180.3 396 32.8
TWI75G1656 Tripterygium wilfordii HOM05D004642 ORTHO05D005466 5.5e-43 180.3 419 32.0
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 7.1e-43 179.9 401 35.4
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 9.3e-43 179.5 484 40.3
SalBow2G0306 Salvia bowleyana HOM05D004642 ORTHO05D005466 2.7e-42 177.9 470 29.8
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 3.0e-41 174.5 718 34.5
Medtr4g054960 Medicago truncatula HOM05D004642 ORTHO05D005466 3.9e-41 174.1 378 38.6
Lj3g0008789 Lotus japonicus HOM05D004642 ORTHO05D005466 6.7e-41 173.3 401 32.9
Lalb_Chr01g0012651 Lupinus albus HOM05D004642 ORTHO05D005466 6.7e-41 173.3 421 31.6
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 6.7e-41 173.3 423 31.9
Sed0016916 Sechium edule HOM05D004642 ORTHO05D005466 8.7e-41 172.9 665 37.0
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 8.7e-41 172.9 702 34.5
Lalb_Chr04g0262651 Lupinus albus HOM05D004642 ORTHO05D005466 1.5e-40 172.2 378 31.2
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 1.9e-40 171.8 425 36.0
BcaB04g20887 Brassica carinata HOM05D004642 ORTHO05D005466 2.5e-40 171.4 661 34.3
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 3.3e-40 171.0 673 28.7
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 7.4e-40 169.9 568 36.6
Glyma.12G087100 Glycine max HOM05D004642 ORTHO05D005466 7.4e-40 169.9 389 32.6
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 9.7e-40 169.5 665 30.4
Sed0016127 Sechium edule HOM05D004642 ORTHO05D005466 2.8e-39 167.9 377 35.5
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 2.0e-37 161.8 701 31.0
BcaB04g18872 Brassica carinata HOM05D004642 ORTHO05D005466 2.6e-37 161.4 414 31.9
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 1.0e-36 159.5 665 32.2
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 3.8e-36 157.5 590 31.9
RcHm_v2.0_Chr2g0137781 Rosa chinensis HOM05D004642 ORTHO05D005466 5.0e-36 157.1 386 39.1
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 6.5e-36 156.8 678 36.6
CAN.G438.64 Capsicum annuum HOM05D004642 ORTHO05D005466 3.2e-35 154.5 422 37.7
MD09G1213500 Malus domestica HOM05D004642 ORTHO05D005466 2.1e-34 151.8 314 35.4
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 2.1e-34 151.8 395 31.4
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 6.1e-34 150.2 358 31.8
Dinv38051 Davidia involucrata HOM05D004642 ORTHO05D005466 1.4e-33 149.1 271 35.8
TAR636G0382 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.4e-33 149.1 274 38.7
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 3.9e-33 147.5 626 43.5
Manes.11G047800 Manihot esculenta HOM05D004642 ORTHO05D005466 1.5e-32 145.6 423 36.9
BcaC01g03843 Brassica carinata HOM05D004642 ORTHO05D005466 2.0e-32 145.2 421 35.6
C03p48030 Brassica napus HOM05D004642 ORTHO05D005466 2.0e-32 145.2 421 35.6
BolC3t17082H Brassica oleracea HOM05D004642 ORTHO05D005466 2.0e-32 145.2 421 35.6
Duzib192G0922 Durio zibethinus HOM05D004642 ORTHO05D005466 4.3e-32 144.1 497 28.4
VMungo1127G1134 Vigna mungo HOM05D004642 ORTHO05D005466 4.3e-32 144.1 417 30.9
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 9.7e-32 142.9 414 31.6
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 4.8e-31 140.6 412 31.3
BraA03t13110Z Brassica rapa HOM05D004642 ORTHO05D005466 6.3e-31 140.2 473 27.5
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 6.3e-31 140.2 414 31.6
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 3.1e-30 137.9 421 29.9
CDE06G0246 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 5.3e-30 137.1 322 28.9
A03p39630 Brassica napus HOM05D004642 ORTHO05D005466 3.4e-29 134.4 426 26.8
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 1.0e-28 132.9 714 40.2
Hund06610 Selenicereus undatus HOM05D004642 ORTHO05D005466 2.2e-28 131.7 740 33.5
Thhalv10023042m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 2.9e-28 131.3 167 42.5
COL.COLO4_30362 Corchorus olitorius HOM05D004642 ORTHO05D005466 3.8e-28 131.0 531 30.3
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 2.5e-27 128.3 712 29.8
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 7.2e-27 126.7 720 33.5
THA.LOC104817998 Tarenaya hassleriana HOM05D004642 ORTHO05D005466 3.9e-25 120.9 421 28.0
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 5.1e-25 120.6 567 32.5
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 8.8e-25 119.8 414 32.4
BcaB06g25698 Brassica carinata HOM05D004642 ORTHO05D005466 1.5e-24 119.0 429 31.9
A05p33450 Brassica napus HOM05D004642 ORTHO05D005466 1.3e-23 115.9 437 31.4
Psat7g189080 Pisum sativum HOM05D004642 ORTHO05D005466 1.3e-23 115.9 391 28.4
arahy.Tifrunner.gnm1.ann1.I53961 Arachis hypogaea HOM05D004642 ORTHO05D005466 2.2e-23 115.2 360 28.6
Hma1.2p1_0323F.1_g125200 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 1.4e-22 112.5 134 48.5
arahy.Tifrunner.gnm1.ann1.D5EQ93 Arachis hypogaea HOM05D004642 ORTHO05D005466 2.4e-22 111.7 417 27.1
TAR624G1258 Trochodendron aralioides HOM05D004642 ORTHO05D005466 4.1e-22 110.9 110 53.6
FAN05G5776 Fragaria x ananassa HOM05D004642 ORTHO05D005466 9.1e-22 109.8 177 41.2
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 1.2e-21 109.4 745 27.9
CANSAT56G1090 Cannabis sativa HOM05D004642 ORTHO05D005466 2.0e-21 108.6 386 32.9
FAN02G1410 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.0e-21 108.6 250 43.6
Os05g0180400 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 2.6e-21 108.2 400 28.8
MSTRG.9454 Avicennia marina HOM05D004642 ORTHO05D005466 4.5e-21 107.5 178 39.9
Os01g0180300 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 4.5e-21 107.5 388 28.4
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 2.9e-20 104.8 673 30.3
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 3.8e-20 104.4 371 24.3
C01p48370 Brassica napus HOM05D004642 ORTHO05D005466 5.0e-20 104.0 387 27.4
AT3G16000 Arabidopsis thaliana HOM05D004642 ORTHO05D005466 3.2e-19 101.3 431 31.6
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 5.5e-19 100.5 104 52.9
HanXRQChr09g0275271 Helianthus annuus HOM05D004642 ORTHO05D005466 1.6e-18 99.0 168 39.9
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 1.6e-18 99.0 732 22.3
MD09G1213300 Malus domestica HOM05D004642 ORTHO05D005466 6.1e-18 97.1 106 50.0
SalBow2G2616 Salvia bowleyana HOM05D004642 ORTHO05D005466 1.0e-17 96.3 403 24.8
SGA_v2.0_scaffold37G14818 Striga asiatica HOM05D004642 ORTHO05D005466 2.3e-17 95.1 706 35.4
Zm00001eb122200 Zea mays HOM05D004642 ORTHO05D005466 2.3e-17 95.1 270 25.9
Sp3g14350 Schrenkiella parvula HOM05D004642 ORTHO05D005466 5.2e-17 94.0 411 26.0
Phvul.011G092000 Phaseolus vulgaris HOM05D004642 ORTHO05D005466 6.7e-17 93.6 407 26.0
arahy.Tifrunner.gnm1.ann1.CA04QB Arachis hypogaea HOM05D004642 ORTHO05D005466 1.1e-16 92.8 376 25.5
arahy.Tifrunner.gnm1.ann1.Z6VQ0W Arachis hypogaea HOM05D004642 ORTHO05D005466 1.1e-16 92.8 376 25.5
AL3G28650 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 1.3e-15 89.4 425 30.1
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 3.7e-15 87.8 688 32.1
EL10Ac9g21996 Beta vulgaris HOM05D004642 ORTHO05D005466 1.1e-14 86.3 381 24.7
Carub.0003s1573 Capsella rubella HOM05D004642 ORTHO05D005466 1.4e-14 85.9 427 30.0
Sc21g0005100 Simmondsia chinensis HOM05D004642 ORTHO05D005466 1.8e-14 85.5 374 30.7
AL776U10010 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 5.3e-14 84.0 94 52.1
SEGI_16798 Sequoiadendron giganteum HOM05D004642 ORTHO05D005466 2.6e-13 81.6 669 25.9
BraA01t03868Z Brassica rapa HOM05D004642 ORTHO05D005466 7.7e-13 80.1 176 31.8
BraA05t22169Z Brassica rapa HOM05D004642 ORTHO05D005466 3.8e-12 77.8 440 28.6
C05p50450 Brassica napus HOM05D004642 ORTHO05D005466 2.5e-11 75.1 433 27.9
BolC5t33791H Brassica oleracea HOM05D004642 ORTHO05D005466 2.5e-11 75.1 418 25.1
BolC1t04795H Brassica oleracea HOM05D004642 ORTHO05D005466 3.2e-11 74.7 242 29.3
MD09G1212900 Malus domestica HOM05D004642 ORTHO05D005466 3.2e-11 74.7 150 45.3
TAR624G0442 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.8e-09 68.9 115 38.3
CDE07G0399 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 4.0e-09 67.8 462 19.7
A03p54580 Brassica napus HOM05D004642 ORTHO05D005466 8.8e-09 66.6 60 56.7
BraA03t14525Z Brassica rapa HOM05D004642 ORTHO05D005466 8.8e-09 66.6 60 56.7
TAR636G1625 Trochodendron aralioides HOM05D004642 ORTHO05D005466 2.6e-08 65.1 57 52.6
A01p38100 Brassica napus HOM05D015723 ORTHO05D003275 5.4e-06 57.4 383 20.4


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