Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 5.8e-206 720.7 374 100.0
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 2.8e-131 472.6 338 79.3
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.1e-66 258.1 366 46.7
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 3.1e-58 229.9 370 41.6
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 2.0e-57 227.3 378 42.1
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 3.9e-53 213.0 371 39.4
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 6.7e-53 212.2 352 42.0
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.5e-52 211.1 368 41.8
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 5.7e-52 209.1 355 39.4
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 5.9e-49 199.1 368 39.1
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 3.8e-48 196.4 374 38.2
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 1.8e-42 177.6 393 36.1
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 5.9e-41 172.6 369 35.2
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 7.7e-41 172.2 358 35.2
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 3.8e-40 169.9 374 36.1
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 5.0e-40 169.5 366 34.4
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 5.0e-40 169.5 348 35.6
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 1.4e-39 167.9 359 35.1
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.7e-38 162.9 369 33.9
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 8.0e-38 162.2 371 34.8
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 3.0e-37 160.2 360 34.4
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.1e-36 158.3 202 44.1
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 9.7e-36 155.2 371 32.9
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 1.3e-35 154.8 348 35.3
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.4e-34 151.4 207 43.5
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 7.0e-34 149.1 374 33.4
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.6e-33 147.9 375 34.7
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 1.0e-32 145.2 353 36.3
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 1.7e-32 144.4 350 32.3
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 2.2e-32 144.1 375 35.7
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 4.2e-31 139.8 341 34.6
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 1.2e-30 138.3 366 36.1
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 1.3e-27 128.3 202 38.1
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 2.2e-27 127.5 182 44.5
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 7.0e-26 122.5 204 35.3
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 9.1e-26 122.1 204 35.3
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 1.0e-24 118.6 205 35.6
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 2.2e-24 117.5 377 29.7
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 1.8e-21 107.8 370 28.4
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 8.3e-19 99.0 202 35.6
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 8.3e-19 99.0 243 30.5
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 5.4e-18 96.3 195 31.8
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 5.4e-18 96.3 195 31.8
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 1.6e-17 94.7 217 31.3
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 1.6e-17 94.7 311 28.3
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.7e-17 94.0 194 34.0
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 3.8e-16 90.1 386 27.5
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.5e-15 88.2 379 28.0
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 1.9e-15 87.8 230 31.3
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 4.2e-15 86.7 101 43.6
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.2e-14 85.1 61 72.1
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.6e-14 84.7 239 29.7
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 9.8e-12 75.5 63 65.1
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 1.4e-10 71.6 106 47.2
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 5.4e-10 69.7 105 43.8
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 1.6e-09 68.2 135 39.3
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 2.0e-09 67.8 68 58.8
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 2.0e-09 67.8 193 26.9
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 4.5e-09 66.6 106 45.3
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 6.6e-08 62.8 198 29.8
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 1.5e-07 61.6 53 60.4
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 1.9e-07 61.2 57 57.9
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 5.6e-07 59.7 58 62.1
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 1.2e-06 58.5 227 23.3
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.6e-06 58.2 193 28.5
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 1.6e-06 58.2 248 23.4
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 3.6e-06 57.0 200 21.5
DCAR_027433 Daucus carota HOM05D008196 ORTHO05D010261 4.7e-06 56.6 48 47.9
DCAR_031984 Daucus carota HOM05D008196 ORTHO05D010261 4.7e-06 56.6 48 47.9


User provided reference genes

Program Settings