Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 2.8e-222 775.0 398 100.0
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 6.8e-197 690.6 393 91.6
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 2.4e-101 373.2 395 53.2
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 2.8e-97 359.8 394 52.0
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 5.8e-95 352.1 389 48.8
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 9.8e-95 351.3 386 50.3
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 1.1e-88 331.3 383 46.7
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 6.8e-88 328.6 384 47.1
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 7.8e-84 315.1 382 46.6
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 8.6e-83 311.6 382 46.6
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.2e-81 307.8 384 46.9
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 8.1e-81 305.1 384 46.6
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.1e-80 304.7 382 46.1
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.2e-79 301.2 396 44.2
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 1.7e-78 297.4 385 43.9
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 4.9e-78 295.8 385 44.9
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 2.4e-77 293.5 384 46.4
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 2.4e-77 293.5 383 45.7
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.1e-76 290.4 385 42.9
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 2.7e-76 290.0 380 45.0
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.5e-76 289.7 385 44.4
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 6.0e-76 288.9 384 43.0
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 1.3e-75 287.7 422 41.2
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 1.7e-75 287.3 330 48.2
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 3.9e-75 286.2 379 43.3
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 5.1e-75 285.8 375 42.7
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 7.3e-74 282.0 380 42.1
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 9.6e-74 281.6 383 43.3
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 6.2e-73 278.9 381 42.0
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 1.2e-71 274.6 379 42.0
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 2.6e-71 273.5 378 40.5
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 5.8e-71 272.3 375 40.5
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.7e-70 270.8 527 34.5
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 2.2e-70 270.4 427 39.3
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 2.9e-70 270.0 385 41.8
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 5.4e-69 265.8 380 41.6
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 3.5e-68 263.1 384 43.2
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.5e-68 263.1 385 41.0
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 3.5e-68 263.1 447 38.3
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 4.6e-68 262.7 379 39.6
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 4.6e-68 262.7 379 39.6
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 6.0e-68 262.3 379 39.6
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.7e-67 260.8 510 34.9
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 3.9e-67 259.6 329 43.8
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 6.6e-67 258.8 387 39.8
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 6.6e-67 258.8 378 41.5
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 8.7e-67 258.5 387 41.1
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 1.1e-66 258.1 377 43.2
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.1e-66 258.1 408 40.4
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.1e-66 258.1 408 40.4
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 1.5e-66 257.7 375 40.8
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 2.5e-66 256.9 379 40.6
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 3.3e-66 256.5 380 38.4
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 3.3e-66 256.5 388 41.2
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 4.3e-66 256.1 384 41.9
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 4.3e-66 256.1 380 40.3
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 1.6e-65 254.2 376 40.7
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 2.1e-65 253.8 380 38.2
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 2.1e-65 253.8 380 37.9
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 6.2e-65 252.3 398 38.9
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 1.1e-64 251.5 380 39.2
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 1.1e-64 251.5 326 45.1
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 4.0e-64 249.6 390 37.2
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 5.3e-64 249.2 319 44.2
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 5.8e-63 245.7 385 40.8
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 9.9e-63 245.0 373 39.1
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 1.7e-62 244.2 378 38.6
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 2.2e-62 243.8 387 37.2
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 2.9e-62 243.4 387 37.2
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 8.4e-62 241.9 313 42.5
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 2.7e-60 236.9 385 38.4
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 7.9e-60 235.3 336 41.7
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 1.0e-59 235.0 381 39.4
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 2.3e-59 233.8 509 34.6
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 1.1e-58 231.5 368 38.6
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 4.3e-58 229.6 221 54.8
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 7.4e-58 228.8 221 53.8
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 6.9e-56 222.2 380 37.4
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 1.7e-54 217.6 326 40.5
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 3.8e-54 216.5 372 37.6
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 6.5e-54 215.7 386 36.3
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 7.9e-52 208.8 377 36.6
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 1.3e-51 208.0 381 36.0
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 8.7e-51 205.3 363 34.7
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 4.3e-50 203.0 311 38.9
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.8e-48 197.6 285 42.5
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 5.3e-48 196.1 388 35.3
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 9.0e-48 195.3 393 35.1
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 8.4e-46 188.7 364 35.4
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 2.1e-44 184.1 364 34.6
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 3.7e-41 173.3 382 32.7
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 1.1e-40 171.8 169 51.5
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 5.3e-40 169.5 379 35.1
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 6.9e-40 169.1 247 44.5
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 2.3e-35 154.1 170 47.6
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.0e-35 153.7 259 37.8
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 6.7e-35 152.5 305 37.4
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 3.3e-34 150.2 303 35.6
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 3.3e-34 150.2 231 42.4
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.2e-33 147.5 302 35.4
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 3.7e-33 146.7 304 35.2
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 3.7e-33 146.7 201 41.3
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 8.2e-33 145.6 274 38.0
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 2.6e-31 140.6 312 34.0
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 3.4e-31 140.2 263 39.9
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 7.0e-24 115.9 100 54.0
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 1.6e-23 114.8 105 55.2
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 1.2e-20 105.1 170 42.9
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 6.1e-20 102.8 363 26.7
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 8.8e-19 99.0 134 46.3
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 4.4e-18 96.7 237 32.5
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.4e-16 91.7 256 32.0
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 2.3e-11 74.3 70 48.6
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 2.3e-11 74.3 70 48.6
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 8.8e-11 72.4 96 39.6
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 2.2e-09 67.8 156 34.6
Pp3c4_4010 Physcomitrium patens HOM05D058747 ORTHO05D007778 2.2e-09 67.8 212 22.6
Pp3c12_25780 Physcomitrium patens HOM05D058747 ORTHO05D007778 8.3e-09 65.9 218 24.8
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 1.1e-08 65.5 129 37.2
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 3.8e-06 57.0 53 49.1
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 8.5e-06 55.8 118 31.4


User provided reference genes

Program Settings