Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 9.1e-171 603.6 331 100.0
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 6.0e-138 494.6 344 81.1
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.3e-31 141.4 347 32.3
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 6.4e-31 139.0 332 34.3
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 2.7e-29 133.7 327 34.3
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.5e-27 127.9 350 30.0
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 4.3e-27 126.3 329 30.7
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 3.8e-23 113.2 347 27.1
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 4.9e-23 112.8 350 28.0
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 4.9e-23 112.8 329 30.4
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 8.4e-23 112.1 325 28.3
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 1.4e-22 111.3 349 26.6
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 1.9e-22 110.9 330 27.9
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 1.9e-22 110.9 327 29.7
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 2.4e-22 110.5 349 28.7
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 9.2e-22 108.6 329 29.2
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 1.2e-21 108.2 349 29.8
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 3.5e-21 106.7 351 29.9
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 4.6e-21 106.3 351 30.2
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 1.0e-20 105.1 329 27.7
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 5.1e-20 102.8 333 27.9
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 5.1e-20 102.8 347 25.4
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 6.6e-20 102.4 352 27.0
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 6.6e-20 102.4 331 27.2
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 6.6e-20 102.4 347 26.2
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 8.6e-20 102.1 348 28.4
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 8.6e-20 102.1 344 27.9
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 2.5e-19 100.5 347 26.2
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 3.3e-19 100.1 343 29.4
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 5.6e-19 99.4 335 26.3
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 7.3e-19 99.0 331 29.3
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 7.3e-19 99.0 348 28.2
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 7.3e-19 99.0 347 25.9
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 9.6e-19 98.6 326 26.7
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 1.2e-18 98.2 348 27.0
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.8e-18 97.1 347 28.5
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 3.6e-18 96.7 330 27.9
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 4.7e-18 96.3 333 25.8
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 8.1e-18 95.5 332 27.1
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 8.1e-18 95.5 332 27.1
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 1.1e-17 95.1 330 27.9
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 1.4e-17 94.7 340 25.3
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 1.8e-17 94.4 331 27.8
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 2.4e-17 94.0 331 26.0
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 2.4e-17 94.0 332 26.8
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 3.1e-17 93.6 337 26.7
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 8.9e-17 92.0 331 27.5
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 8.9e-17 92.0 331 25.7
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 8.9e-17 92.0 331 25.7
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.2e-16 91.7 333 27.6
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 1.2e-16 91.7 346 26.0
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.2e-16 91.7 290 31.4
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 1.5e-16 91.3 330 29.7
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 2.0e-16 90.9 328 26.5
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 2.0e-16 90.9 354 26.6
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 3.4e-16 90.1 333 27.9
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 5.8e-16 89.4 336 26.2
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 5.8e-16 89.4 354 26.3
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 9.9e-16 88.6 334 26.9
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 4.9e-15 86.3 277 30.3
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 8.4e-15 85.5 326 27.3
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.1e-14 85.1 333 24.9
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 1.4e-14 84.7 358 24.6
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 2.4e-14 84.0 329 26.1
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 7.1e-14 82.4 297 26.9
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 9.3e-14 82.0 297 26.9
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 9.3e-14 82.0 348 24.7
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 1.2e-13 81.6 318 25.5
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 1.2e-13 81.6 335 25.1
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.2e-13 81.6 329 24.3
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.6e-13 81.3 331 25.1
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 2.1e-13 80.9 326 25.8
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 3.5e-13 80.1 316 26.9
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 6.0e-13 79.3 333 24.3
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 7.8e-13 79.0 326 25.5
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 1.0e-12 78.6 332 25.9
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 1.0e-12 78.6 346 24.6
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 1.0e-12 78.6 334 25.4
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.3e-12 78.2 285 26.7
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 1.3e-12 78.2 332 25.6
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 1.7e-12 77.8 326 23.6
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 3.9e-12 76.6 335 23.9
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.1e-11 75.1 337 25.2
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.5e-11 74.7 340 25.3
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 3.3e-11 73.6 331 24.2
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 3.3e-11 73.6 331 24.2
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 4.3e-11 73.2 122 36.9
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 4.3e-11 73.2 187 29.9
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 5.6e-11 72.8 340 25.3
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 1.6e-10 71.2 331 27.8
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 2.1e-10 70.9 264 25.8
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 3.6e-10 70.1 367 23.7
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 6.2e-10 69.3 273 26.4
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 1.1e-09 68.6 337 26.7
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 2.0e-08 64.3 338 24.3
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 3.8e-07 60.1 338 22.8
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 3.8e-07 60.1 331 23.0
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 6.4e-07 59.3 278 27.3
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 9.3e-06 55.5 348 22.1


User provided reference genes

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