Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 0.0e+00 1120.5 562 100.0
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 7.7e-311 1069.7 562 95.9
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 8.8e-190 667.5 574 61.1
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 2.2e-180 636.3 570 60.0
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 7.7e-178 627.9 427 70.7
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 5.5e-176 621.7 563 59.0
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 2.6e-173 612.8 556 59.2
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 4.4e-173 612.1 476 63.4
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 5.7e-173 611.7 560 57.5
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 9.7e-173 610.9 482 63.1
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 1.4e-171 607.1 488 61.7
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 5.3e-171 605.1 558 57.5
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 7.0e-171 604.7 564 57.3
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 4.5e-170 602.1 556 56.3
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 1.0e-169 600.9 509 58.7
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.9e-169 599.4 451 65.9
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 6.5e-169 598.2 509 58.7
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.1e-168 597.4 551 59.0
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 1.5e-168 597.0 479 63.0
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.9e-168 596.7 475 61.1
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 3.2e-168 595.9 423 65.0
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 5.5e-168 595.1 475 61.9
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 7.2e-168 594.7 548 56.9
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 1.2e-167 594.0 475 60.6
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.6e-167 593.6 556 56.3
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 4.0e-166 589.0 566 54.1
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.5e-165 587.0 423 66.9
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 4.4e-165 585.5 566 54.6
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 9.8e-165 584.3 488 59.4
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 2.2e-164 583.2 536 58.2
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 2.2e-164 583.2 500 58.8
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.8e-164 582.8 472 61.2
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 6.3e-164 581.6 558 57.2
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 3.1e-163 579.3 476 60.3
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 4.1e-163 578.9 473 60.0
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.2e-162 577.4 538 55.6
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 5.9e-162 575.1 556 54.5
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 1.0e-161 574.3 435 64.8
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 1.7e-161 573.5 499 57.9
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 2.2e-161 573.2 387 68.7
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.5e-160 570.5 497 56.9
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.9e-160 570.1 416 64.9
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 3.2e-160 569.3 452 60.4
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.1e-159 566.6 546 54.0
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 6.1e-159 565.1 470 58.7
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 8.0e-159 564.7 545 53.9
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 1.0e-158 564.3 497 56.5
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 3.0e-158 562.8 468 58.8
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 4.0e-158 562.4 500 58.4
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 1.5e-157 560.5 502 58.2
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.6e-157 559.7 530 54.2
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 4.4e-157 558.9 540 54.6
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 3.7e-156 555.8 526 54.4
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 1.4e-155 553.9 551 51.2
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 2.4e-155 553.1 492 55.5
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 9.1e-155 551.2 459 59.5
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 9.1e-155 551.2 498 56.4
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.7e-154 549.7 465 58.7
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 3.5e-154 549.3 459 58.6
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 3.5e-154 549.3 439 62.4
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 2.3e-153 546.6 503 54.1
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 3.8e-153 545.8 481 56.8
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 3.8e-153 545.8 466 57.5
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 3.8e-153 545.8 423 61.7
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 5.0e-153 545.4 492 56.5
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 8.6e-153 544.7 520 54.0
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 9.5e-152 541.2 469 56.9
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.2e-151 540.8 399 64.9
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 2.8e-151 539.7 467 56.5
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.7e-151 538.9 399 64.4
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.4e-150 537.3 435 60.9
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 1.4e-150 537.3 439 60.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 1.8e-150 537.0 469 56.5
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.8e-150 537.0 391 63.2
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 4.0e-150 535.8 469 56.1
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 6.8e-150 535.0 491 53.4
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 4.9e-148 528.9 479 56.2
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.8e-142 510.4 369 66.4
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 1.2e-141 507.7 609 46.0
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 5.8e-141 505.4 519 52.6
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 7.8e-138 495.0 451 54.5
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 2.0e-133 480.3 363 62.0
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 4.9e-124 449.1 386 53.9
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.4e-123 446.8 444 47.7
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.2e-123 446.4 300 71.0
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 2.3e-121 440.3 430 49.1
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 2.9e-116 423.3 388 50.3
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 8.4e-116 421.8 562 46.8
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 1.4e-115 421.0 306 66.7
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 9.6e-112 408.3 293 65.9
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 9.9e-109 398.3 287 66.2
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 6.0e-106 389.0 567 42.0
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 1.9e-104 384.0 271 67.5
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 6.2e-103 379.0 283 64.0
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 9.6e-96 355.1 215 74.9
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.4e-94 351.3 466 43.6
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.4e-93 346.7 265 66.4
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 6.5e-92 342.4 358 47.5
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 3.5e-90 336.7 236 69.1
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 4.6e-90 336.3 358 46.6
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.3e-84 318.2 234 67.5
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.2e-83 313.2 250 64.4
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 7.9e-66 255.8 167 71.3
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 1.5e-64 251.5 500 32.8
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 2.2e-63 247.7 291 46.0
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.7e-52 211.5 315 34.9
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 3.5e-45 187.2 304 32.9
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 1.5e-43 181.8 249 42.2
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 3.2e-43 180.6 251 42.6
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 2.7e-42 177.6 111 77.5
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 1.8e-41 174.9 172 50.0
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 2.8e-39 167.5 183 49.7
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 6.3e-39 166.4 489 27.2
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.0e-37 161.4 184 48.9
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.2e-34 152.1 107 72.0
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 1.2e-32 145.6 403 28.5
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.7e-29 134.4 91 74.7
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.6e-26 125.2 122 50.0
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 8.0e-26 122.9 203 39.4
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 1.7e-15 88.6 98 46.9
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 5.4e-14 83.6 66 65.2
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 2.1e-13 81.6 63 57.1
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-11 73.9 43 74.4
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 5.2e-09 67.0 35 68.6
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 8.4e-07 59.7 38 65.8


User provided reference genes

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