Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 6.7e-246 853.6 438 100.0
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 2.5e-240 835.1 438 96.1
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 7.6e-157 557.8 436 72.2
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 1.3e-148 530.4 419 69.9
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.1e-131 474.2 388 68.8
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 1.8e-121 440.3 388 65.7
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-116 422.5 435 58.4
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-113 413.7 426 57.3
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-101 373.6 281 71.5
PSO081G0156 Papaver somniferum HOM05D004787 ORTHO05D304832 4.1e-86 322.8 181 92.8
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 4.0e-73 279.6 416 45.9
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 4.1e-70 269.6 274 56.6
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.1e-62 245.0 433 43.6
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-58 231.5 128 91.4
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 2.7e-53 213.8 144 78.5
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-49 199.9 438 37.9
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 4.2e-46 189.9 362 41.7
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 1.0e-44 185.3 324 43.8
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-42 177.9 125 73.6
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-40 171.8 202 51.5
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-38 164.9 245 45.7
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 7.9e-37 159.1 200 50.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.0e-36 157.1 200 49.5
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 1.1e-35 155.2 239 43.5
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.9e-30 137.9 68 98.5
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 4.6e-29 133.3 68 95.6
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 6.9e-25 119.4 72 79.2
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 5.9e-24 116.3 419 31.0
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 5.9e-24 116.3 420 31.2
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 7.7e-24 115.9 432 31.5
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 5.0e-23 113.2 408 32.1
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 5.0e-23 113.2 398 31.9
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 8.5e-23 112.5 418 30.6
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 8.5e-23 112.5 418 30.6
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 8.5e-23 112.5 408 30.9
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 8.5e-23 112.5 408 31.9
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 8.5e-23 112.5 403 29.8
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 8.5e-23 112.5 335 31.0
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 8.5e-23 112.5 423 30.5
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.1e-22 112.1 400 30.8
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 1.1e-22 112.1 424 29.2
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.4e-22 111.7 407 29.5
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.9e-22 111.3 418 30.4
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 2.5e-22 110.9 395 31.6
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 3.2e-22 110.5 434 29.5
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 3.2e-22 110.5 445 28.8
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 4.2e-22 110.2 432 30.1
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 4.2e-22 110.2 397 30.0
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 5.5e-22 109.8 396 29.3
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 7.2e-22 109.4 434 29.7
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.6e-21 108.2 410 29.3
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.6e-21 108.2 427 28.8
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 2.1e-21 107.8 422 29.6
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 2.1e-21 107.8 413 30.3
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 3.6e-21 107.1 353 32.3
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 3.6e-21 107.1 418 28.9
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 4.6e-21 106.7 396 29.5
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 6.1e-21 106.3 408 29.2
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 6.1e-21 106.3 341 32.0
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 7.9e-21 105.9 399 29.3
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 7.9e-21 105.9 417 29.0
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 7.9e-21 105.9 399 29.1
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 7.9e-21 105.9 412 29.9
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 1.4e-20 105.1 421 29.7
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.8e-20 104.8 339 32.2
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.8e-20 104.8 432 29.6
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 2.3e-20 104.4 401 29.7
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 2.3e-20 104.4 410 29.0
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 3.0e-20 104.0 399 29.1
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 3.0e-20 104.0 416 29.1
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 5.1e-20 103.2 398 29.9
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 6.7e-20 102.8 422 27.7
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.5e-19 101.7 399 29.8
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.5e-19 101.7 416 28.1
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.5e-19 101.7 416 28.1
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 1.5e-19 101.7 338 32.0
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 2.0e-19 101.3 416 28.1
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 2.5e-19 100.9 429 27.5
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.5e-19 100.9 408 28.7
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.3e-19 100.5 399 29.1
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 4.3e-19 100.1 421 28.7
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 4.3e-19 100.1 432 28.9
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 4.3e-19 100.1 362 30.9
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 5.7e-19 99.8 435 28.3
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 7.4e-19 99.4 352 30.4
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 9.7e-19 99.0 340 31.2
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 9.7e-19 99.0 397 28.2
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.7e-18 98.2 340 30.0
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 2.8e-18 97.4 339 29.5
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 3.7e-18 97.1 440 26.1
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 6.3e-18 96.3 396 29.5
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 8.2e-18 95.9 424 28.1
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 1.1e-17 95.5 426 28.4
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.1e-17 95.5 353 27.8
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.1e-17 95.5 396 29.5
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.4e-17 95.1 396 29.3
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.8e-17 94.7 409 28.1
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.8e-17 94.7 396 29.0
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 2.4e-17 94.4 413 27.1
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.4e-17 94.4 336 28.6
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.4e-17 94.4 395 27.8
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.4e-17 94.4 402 27.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 3.1e-17 94.0 398 28.6
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 5.3e-17 93.2 413 27.8
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 5.3e-17 93.2 283 31.8
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 9.1e-17 92.4 237 35.4
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.0e-16 91.3 409 26.4
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 2.6e-16 90.9 393 29.5
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 1.0e-15 89.0 341 28.2
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.0e-15 89.0 414 28.0
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.7e-15 88.2 354 28.0
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.7e-15 88.2 341 28.4
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.7e-15 88.2 341 28.4
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 5.0e-15 86.7 148 44.6
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 5.0e-15 86.7 148 44.6
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.1e-14 85.5 392 27.8
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 2.5e-14 84.3 399 26.6
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 4.2e-14 83.6 412 26.0
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 7.2e-14 82.8 404 26.2
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 9.4e-14 82.4 352 28.1
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.2e-13 82.0 152 40.8
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 1.6e-13 81.6 271 31.4
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.6e-13 81.6 396 27.8
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.4e-12 78.6 427 26.0
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.4e-12 78.6 227 33.0
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 1.8e-12 78.2 359 27.6
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 3.9e-12 77.0 306 29.7
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 5.1e-12 76.6 524 25.4
PSO832G3890 Papaver somniferum HOM05D000071 ORTHO05D003524 1.1e-11 75.5 73 56.2
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 5.7e-11 73.2 384 25.0
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.8e-10 70.1 287 28.2
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 1.8e-09 68.2 389 26.5
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 1.8e-09 68.2 373 26.5
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.0e-08 64.7 328 27.4
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-07 62.0 86 50.0
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 3.2e-06 57.4 56 57.1


User provided reference genes

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