Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4321 Papaver somniferum HOM05D000197 ORTHO05D000114 4.5e-52 207.6 102 100.0
PSO198G0137 Papaver somniferum HOM05D000197 ORTHO05D000114 1.1e-42 176.4 96 86.5
PSO198G0039 Papaver somniferum HOM05D000197 ORTHO05D000114 1.6e-41 172.6 97 84.5
PSO063G6835 Papaver somniferum HOM05D000197 ORTHO05D000114 4.7e-41 171.0 102 79.4
PSO596G0003 Papaver somniferum HOM05D000197 ORTHO05D000114 1.9e-34 149.1 95 75.8
PSO423G0274 Papaver somniferum HOM05D000197 ORTHO05D000114 7.2e-34 147.1 95 75.8
PSO596G0044 Papaver somniferum HOM05D000197 ORTHO05D000114 1.0e-32 143.3 95 73.7
PSO423G0029 Papaver somniferum HOM05D000197 ORTHO05D000114 7.5e-31 137.1 95 69.5
PSO596G0062 Papaver somniferum HOM05D000197 ORTHO05D000114 7.5e-31 137.1 95 67.4
PSO596G0034 Papaver somniferum HOM05D000197 ORTHO05D000114 6.3e-30 134.0 95 68.4
PSO423G0115 Papaver somniferum HOM05D000197 ORTHO05D000114 1.8e-29 132.5 95 64.2
PSO423G0221 Papaver somniferum HOM05D000197 ORTHO05D000114 7.0e-29 130.6 95 67.4
PSO596G0030 Papaver somniferum HOM05D000197 ORTHO05D000114 3.3e-26 121.7 95 62.1
PSO423G0062 Papaver somniferum HOM05D000197 ORTHO05D000114 7.2e-26 120.6 95 64.2
PSO782G2914 Papaver somniferum HOM05D000197 ORTHO05D000114 1.6e-25 119.4 95 64.2
PSO478G0630 Papaver somniferum HOM05D000197 ORTHO05D000114 6.1e-25 117.5 95 61.1
PSO596G0031 Papaver somniferum HOM05D000197 ORTHO05D000114 8.0e-25 117.1 85 67.1
PSO675G8026 Papaver somniferum HOM05D000197 ORTHO05D000114 1.0e-24 116.7 95 63.2
PSO423G0179 Papaver somniferum HOM05D000197 ORTHO05D000114 3.0e-24 115.2 86 65.1
PSO596G0026 Papaver somniferum HOM05D000197 ORTHO05D000114 4.0e-24 114.8 95 61.1
PSO423G0199 Papaver somniferum HOM05D000197 ORTHO05D000114 8.3e-22 107.1 93 57.0
PSO541G5172 Papaver somniferum HOM05D000197 ORTHO05D000114 4.1e-21 104.8 85 64.7
PSO135G0087 Papaver somniferum HOM05D000197 ORTHO05D000114 1.8e-16 89.4 91 51.6
PSO135G0061 Papaver somniferum HOM05D000197 ORTHO05D000114 2.0e-15 85.9 92 48.9
PSO717G0065 Papaver somniferum HOM05D000197 ORTHO05D000114 3.4e-15 85.1 91 49.5
PSO170G1421 Papaver somniferum HOM05D000197 ORTHO05D000114 9.8e-15 83.6 94 50.0
PSO455G0177 Papaver somniferum HOM05D000197 ORTHO05D000114 2.9e-14 82.0 99 48.5
PSO675G1414 Papaver somniferum HOM05D000197 ORTHO05D000114 6.4e-14 80.9 101 42.6
PSO017G6984 Papaver somniferum HOM05D000197 ORTHO05D000114 7.8e-12 73.9 101 41.6
PSO017G7073 Papaver somniferum HOM05D000197 ORTHO05D000114 2.3e-11 72.4 90 43.3
PSO017G2745 Papaver somniferum HOM05D000197 ORTHO05D000114 3.0e-11 72.0 90 43.3
PSO017G0222 Papaver somniferum HOM05D000197 ORTHO05D000114 8.6e-11 70.5 90 42.2
PSO017G4226 Papaver somniferum HOM05D000197 ORTHO05D000114 8.6e-11 70.5 90 42.2
PSO017G5940 Papaver somniferum HOM05D000197 ORTHO05D000114 8.6e-11 70.5 90 42.2
PSO017G3532 Papaver somniferum HOM05D000197 ORTHO05D000114 1.1e-10 70.1 90 43.3
PSO017G1020 Papaver somniferum HOM05D000197 ORTHO05D000114 2.5e-10 68.9 90 41.1
PSO017G6754 Papaver somniferum HOM05D000197 ORTHO05D000114 2.5e-10 68.9 90 41.1
TAR175G0001 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.1e-09 65.9 86 39.5
TAR180G0003 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.1e-09 65.9 86 39.5
Hma1.2p1_0346F.1_g131440 Hydrangea macrophylla HOM05D000197 ORTHO05D000114 4.7e-09 64.7 83 42.2
Atru.chr11.872 Acer truncatum HOM05D000197 ORTHO05D000114 3.1e-08 62.0 95 38.9
Thecc.02G285000 Theobroma cacao HOM05D000197 ORTHO05D000114 5.2e-08 61.2 84 34.5
TAR369G1071 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.8e-08 60.8 86 37.2
TAR371G0022 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.8e-08 60.8 86 36.0
TAR371G0172 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.8e-08 60.8 86 36.0
TAR371G0425 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.8e-08 60.8 86 36.0
TAR371G1130 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.8e-08 60.8 86 36.0
GSVIVG01011733001 Vitis vinifera HOM05D000197 ORTHO05D000114 6.8e-08 60.8 89 40.4
PSO135G0385 Papaver somniferum HOM05D000197 ORTHO05D000114 8.9e-08 60.5 97 41.2
Lj3g0012274 Lotus japonicus HOM05D000197 ORTHO05D000114 1.5e-07 59.7 86 34.9
PSO675G0605 Papaver somniferum HOM05D000197 ORTHO05D000114 1.5e-07 59.7 89 36.0
FAN11G1691 Fragaria x ananassa HOM05D000197 ORTHO05D000114 2.0e-07 59.3 90 40.0
A08p28340 Brassica napus HOM05D000197 ORTHO05D000114 2.6e-07 58.9 85 35.3
BraA08t34765Z Brassica rapa HOM05D000197 ORTHO05D000114 2.6e-07 58.9 85 35.3
FvH4_3g29540 Fragaria vesca HOM05D000197 ORTHO05D000114 2.6e-07 58.9 90 40.0
Psat6g042840 Pisum sativum HOM05D000197 ORTHO05D000114 2.6e-07 58.9 92 32.6
Migut.E00440 Erythranthe guttata HOM05D000197 ORTHO05D000114 4.4e-07 58.2 89 38.2
GSVIVG01011730001 Vitis vinifera HOM05D000197 ORTHO05D000114 5.8e-07 57.8 82 36.6
FvH4_3g29550 Fragaria vesca HOM05D000197 ORTHO05D000114 7.5e-07 57.4 95 30.5
Thecc.02G284800 Theobroma cacao HOM05D000197 ORTHO05D000114 7.5e-07 57.4 84 34.5
ECA234G3913 Erigeron canadensis HOM05D000197 ORTHO05D000114 9.8e-07 57.0 92 34.8
MD16G1024100 Malus domestica HOM05D000197 ORTHO05D000114 9.8e-07 57.0 92 35.9
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 1.3e-06 56.6 88 37.5
QL03p033671 Quercus lobata HOM05D000197 ORTHO05D000114 1.3e-06 56.6 83 33.7
Ciclev10017055m.g Citrus clementina HOM05D000197 ORTHO05D000114 1.7e-06 56.2 92 35.9
FAN11G0872 Fragaria x ananassa HOM05D000197 ORTHO05D000114 2.2e-06 55.8 83 32.5
Lj2g0025965 Lotus japonicus HOM05D000197 ORTHO05D000114 2.2e-06 55.8 88 35.2
C08p21740 Brassica napus HOM05D000197 ORTHO05D000114 2.9e-06 55.5 85 35.3
CANSAT01G2367 Cannabis sativa HOM05D000197 ORTHO05D000114 2.9e-06 55.5 91 34.1
Ciclev10018174m.g Citrus clementina HOM05D000197 ORTHO05D000114 2.9e-06 55.5 84 36.9
Sc11g0003770 Simmondsia chinensis HOM05D000197 ORTHO05D000114 2.9e-06 55.5 92 35.9
Dinv14414 Davidia involucrata HOM05D000197 ORTHO05D000114 3.7e-06 55.1 91 39.6
Dinv28034 Davidia involucrata HOM05D000197 ORTHO05D000114 4.9e-06 54.7 91 36.3
Gorai.005G190800 Gossypium raimondii HOM05D000197 ORTHO05D000114 4.9e-06 54.7 88 28.4
Gorai.005G191000 Gossypium raimondii HOM05D000197 ORTHO05D000114 4.9e-06 54.7 88 28.4
MBI15_g00934_MAGBIO Magnolia biondii HOM05D000197 ORTHO05D000114 4.9e-06 54.7 87 37.9
Oeu062656.1 Olea europaea HOM05D000197 ORTHO05D000114 4.9e-06 54.7 89 34.8
Potri.017G051100 Populus trichocarpa HOM05D000197 ORTHO05D000114 4.9e-06 54.7 89 36.0
GSVIVG01011726001 Vitis vinifera HOM05D000197 ORTHO05D000114 4.9e-06 54.7 85 34.1
BcaC07g39184 Brassica carinata HOM05D000197 ORTHO05D000114 6.4e-06 54.3 85 34.1
BolC8t49812H Brassica oleracea HOM05D000197 ORTHO05D000114 6.4e-06 54.3 85 34.1
COL.COLO4_13148 Corchorus olitorius HOM05D000197 ORTHO05D000114 6.4e-06 54.3 86 32.6
Haze_10956 Corylus avellana HOM05D000197 ORTHO05D000114 6.4e-06 54.3 82 39.0
Psat6g042720 Pisum sativum HOM05D000197 ORTHO05D000114 6.4e-06 54.3 90 33.3
BcaC08g46534 Brassica carinata HOM05D000197 ORTHO05D000114 8.3e-06 53.9 87 32.2
C06p44950 Brassica napus HOM05D000197 ORTHO05D000114 8.3e-06 53.9 87 32.2
BolC6t39555H Brassica oleracea HOM05D000197 ORTHO05D000114 8.3e-06 53.9 87 32.2
PSO349G0221 Papaver somniferum HOM05D000197 ORTHO05D000114 8.3e-06 53.9 97 34.0
Phvul.003G023600 Phaseolus vulgaris HOM05D000197 ORTHO05D000114 8.3e-06 53.9 89 32.6
Sc11g0003690 Simmondsia chinensis HOM05D000197 ORTHO05D000114 8.3e-06 53.9 92 34.8


User provided reference genes

Program Settings