Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.4e-48 196.1 104 100.0
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.5e-42 176.0 96 97.9
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.8e-35 152.5 96 81.2
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 1.1e-34 149.8 96 78.1
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 2.5e-34 148.7 96 80.2
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 3.3e-34 148.3 95 78.9
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 3.3e-34 148.3 96 78.1
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 9.6e-34 146.7 96 78.1
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 1.3e-33 146.4 96 79.2
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 1.3e-33 146.4 96 80.2
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 2.1e-33 145.6 96 78.1
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 6.2e-33 144.1 97 78.4
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 1.4e-32 142.9 96 77.1
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 3.1e-32 141.7 96 76.0
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 4.0e-32 141.4 96 75.0
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 4.0e-32 141.4 107 72.0
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 4.0e-32 141.4 98 78.6
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 9.0e-32 140.2 96 76.0
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 1.5e-31 139.4 96 74.0
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 2.0e-31 139.0 100 75.0
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 2.0e-31 139.0 96 74.0
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 5.8e-31 137.5 98 76.5
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 5.8e-31 137.5 97 75.3
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 5.8e-31 137.5 96 74.0
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 5.8e-31 137.5 96 74.0
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 7.6e-31 137.1 96 71.9
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.3e-30 136.3 96 72.9
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.7e-30 136.0 99 74.7
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.7e-30 136.0 96 72.9
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 2.2e-30 135.6 98 75.5
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 2.9e-30 135.2 96 71.9
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.8e-30 134.8 98 74.5
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 4.9e-30 134.4 98 73.5
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 1.4e-29 132.9 97 71.1
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 1.4e-29 132.9 96 70.8
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 1.9e-29 132.5 96 75.0
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 5.5e-29 131.0 96 71.9
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 5.5e-29 131.0 97 71.1
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 5.5e-29 131.0 97 70.1
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 1.6e-28 129.4 99 69.7
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 2.7e-28 128.6 98 65.3
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 6.0e-28 127.5 96 70.8
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 6.0e-28 127.5 99 73.7
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 6.0e-28 127.5 98 70.4
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 7.9e-28 127.1 96 69.8
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 7.9e-28 127.1 96 70.8
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 1.0e-27 126.7 96 68.8
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 1.8e-27 125.9 96 69.8
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 1.8e-27 125.9 96 69.8
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 1.8e-27 125.9 96 69.8
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 1.8e-27 125.9 96 69.8
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.8e-27 125.9 98 69.4
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 3.0e-27 125.2 96 67.7
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 3.9e-27 124.8 97 66.0
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 3.9e-27 124.8 96 68.8
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 3.9e-27 124.8 96 68.8
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.9e-27 124.8 98 68.4
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 5.1e-27 124.4 96 67.7
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 5.1e-27 124.4 99 68.7
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 1.5e-26 122.9 96 66.7
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 1.9e-26 122.5 103 62.1
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 4.3e-26 121.3 96 67.7
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 4.3e-26 121.3 96 64.6
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 4.3e-26 121.3 101 64.4
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 5.7e-26 120.9 98 66.3
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 5.7e-26 120.9 97 67.0
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 9.6e-26 120.2 95 65.3
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 9.6e-26 120.2 96 65.6
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.3e-25 119.8 98 66.3
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 1.6e-25 119.4 96 64.6
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 2.1e-25 119.0 93 67.7
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 2.1e-25 119.0 96 65.6
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 2.1e-25 119.0 97 63.9
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.8e-25 118.6 115 62.6
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 8.2e-25 117.1 98 64.3
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 3.1e-24 115.2 96 63.5
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 9.0e-24 113.6 98 61.2
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 1.2e-23 113.2 96 65.6
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.0e-23 112.5 96 62.5
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 7.6e-23 110.5 81 72.8
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 7.6e-23 110.5 95 64.2
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 3.8e-22 108.2 89 61.8
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 5.0e-22 107.8 96 62.5
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 4.2e-21 104.8 81 70.4
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 9.3e-21 103.6 99 60.6
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 1.2e-20 103.2 81 69.1
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 1.6e-20 102.8 106 54.7
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 2.1e-20 102.4 97 58.8
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.0e-19 100.1 67 79.1
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 3.9e-19 98.2 67 77.6
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 5.1e-19 97.8 64 78.1
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 6.7e-19 97.4 99 55.6
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 1.1e-18 96.7 107 52.3
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 7.4e-18 94.0 67 74.6
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 9.7e-18 93.6 67 71.6
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 2.2e-17 92.4 62 71.0
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 3.7e-17 91.7 89 56.2
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 3.1e-16 88.6 66 71.2
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 3.4e-15 85.1 68 69.1
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 7.7e-15 84.0 53 83.0
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.4e-13 79.7 50 80.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 1.4e-13 79.7 52 80.8
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.9e-13 79.3 60 73.3
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 3.2e-13 78.6 50 82.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-13 78.2 53 83.0
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 3.0e-11 72.0 53 69.8
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.3e-09 64.3 39 79.5
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 6.9e-08 60.8 103 38.8
SMO203G0278 Selaginella moellendorffii HOM05D000001 ORTHO05D375656 1.7e-06 56.2 64 53.1


User provided reference genes

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