Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 3.1e-265 917.9 464 100.0
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 2.8e-202 708.8 455 79.8
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 2.1e-197 692.6 446 79.4
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 2.6e-195 685.6 469 76.1
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 4.8e-194 681.4 462 76.4
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 8.3e-194 680.6 466 74.7
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 2.4e-193 679.1 463 75.2
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 3.1e-193 678.7 460 76.1
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 4.1e-193 678.3 461 75.7
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 4.5e-192 674.9 470 73.4
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 5.9e-192 674.5 461 73.8
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 5.5e-190 667.9 457 75.1
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 5.5e-190 667.9 466 74.0
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 5.5e-190 667.9 457 74.8
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 2.1e-189 666.0 443 77.0
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 2.1e-189 666.0 387 84.0
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 2.7e-189 665.6 470 72.3
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 3.6e-189 665.2 461 74.0
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 4.7e-189 664.8 470 72.3
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 6.8e-188 661.0 443 76.5
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 1.2e-187 660.2 461 72.5
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 2.6e-187 659.1 460 73.3
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 5.7e-187 657.9 442 76.0
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 9.8e-187 657.1 388 82.5
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 9.8e-187 657.1 484 71.5
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.7e-186 656.4 437 75.5
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 1.1e-185 653.7 397 80.6
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 1.1e-185 653.7 459 71.9
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 7.0e-185 651.0 457 73.1
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 1.2e-184 650.2 399 79.7
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 2.0e-184 649.4 459 73.6
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 3.8e-183 645.2 499 69.1
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 8.6e-183 644.0 403 78.4
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 2.5e-182 642.5 403 78.2
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 2.5e-182 642.5 469 71.0
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 3.3e-182 642.1 413 76.8
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 1.2e-181 640.2 432 75.9
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 4.0e-180 635.2 405 79.3
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 4.0e-180 635.2 462 70.3
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 3.4e-179 632.1 428 74.8
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 3.4e-179 632.1 401 78.6
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 7.5e-179 630.9 456 73.0
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 6.4e-178 627.9 432 74.8
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 6.4e-178 627.9 452 72.3
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 2.4e-177 625.9 482 68.7
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 7.0e-177 624.4 393 79.1
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 9.2e-177 624.0 425 75.1
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 1.2e-176 623.6 393 78.4
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 3.5e-176 622.1 431 74.7
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 1.0e-175 620.5 452 71.7
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 5.0e-175 618.2 599 58.8
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 6.6e-175 617.8 375 80.8
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 6.6e-175 617.8 467 69.8
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 1.1e-174 617.1 418 74.4
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 1.5e-174 616.7 360 88.9
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 1.9e-174 616.3 462 70.3
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 5.6e-174 614.8 459 70.6
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 1.2e-173 613.6 464 69.8
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 2.3e-172 609.4 374 79.7
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 8.9e-172 607.4 399 77.4
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 1.2e-171 607.1 522 62.8
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 1.5e-171 606.7 381 80.1
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 4.4e-171 605.1 386 77.7
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 2.2e-170 602.8 463 69.8
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 8.3e-170 600.9 404 74.3
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 2.0e-168 596.3 390 76.2
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 8.6e-167 590.9 473 66.4
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 2.5e-166 589.3 510 62.7
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 3.6e-165 585.5 417 72.2
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 1.4e-164 583.6 444 70.0
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 2.6e-163 579.3 437 70.5
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 7.5e-163 577.8 347 84.7
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.2e-160 570.5 361 78.4
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 4.3e-158 562.0 473 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 1.1e-156 557.4 441 65.3
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 3.4e-155 552.4 388 72.9
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.9e-153 546.6 496 60.9
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 3.5e-152 542.3 415 68.7
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 4.3e-150 535.4 402 67.9
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 8.1e-149 531.2 461 62.0
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 4.0e-148 528.9 460 62.6
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 2.6e-147 526.2 407 65.8
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 1.3e-146 523.9 391 66.5
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 3.8e-146 522.3 412 68.4
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.7e-144 516.2 358 74.6
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 6.6e-143 511.5 414 65.5
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 6.9e-140 501.5 461 61.4
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 2.2e-138 496.5 397 65.5
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.2e-138 496.5 454 60.4
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 7.1e-137 491.5 294 82.7
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 2.8e-125 453.0 386 64.2
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 3.5e-120 436.0 408 54.7
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 1.8e-119 433.7 262 82.1
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 4.3e-118 429.1 303 73.3
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 3.2e-113 412.9 399 53.6
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 1.1e-110 404.4 490 46.9
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 6.3e-109 398.7 259 76.8
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 1.2e-91 341.3 251 73.3
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 4.7e-88 329.3 205 75.1
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 4.4e-86 322.8 541 39.2
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 3.7e-85 319.7 255 71.4
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 8.2e-85 318.5 253 70.8
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 2.7e-83 313.5 252 69.4
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.5e-78 297.7 186 75.3
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.0e-78 297.4 186 74.7
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 4.8e-77 292.7 172 82.6
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 2.0e-70 270.8 213 70.9
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 3.7e-69 266.5 187 68.4
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 1.7e-66 257.7 155 80.6
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 2.9e-66 256.9 152 83.6
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 1.4e-63 248.1 236 58.1
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 6.8e-63 245.7 362 45.3
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 3.4e-62 243.4 157 77.1
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 3.7e-61 240.0 245 58.0
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 3.7e-61 240.0 245 58.0
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 3.7e-61 240.0 245 58.0
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 9.2e-60 235.3 165 69.7
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 1.7e-58 231.1 253 57.7
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 9.5e-57 225.3 170 68.8
CSS0031450 Camellia sinensis var. sinensis HOM05D005057 ORTHO05D006570 6.2e-48 196.1 131 71.0
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 2.3e-47 194.1 152 72.4
Psat1g199040 Pisum sativum HOM05D005057 ORTHO05D006570 1.2e-46 191.8 132 70.5
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 2.1e-43 181.0 113 80.5
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 1.4e-36 158.3 94 79.8
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 1.0e-34 152.1 147 60.5
unitig_22.g6754 Utricularia gibba HOM05D005057 ORTHO05D006570 3.0e-34 150.6 144 52.8
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 4.9e-29 133.3 82 82.9
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 4.9e-29 133.3 74 82.4
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 1.9e-28 131.3 82 81.7
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 1.2e-27 128.6 178 47.8
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 1.1e-25 122.1 144 50.7
RcHm_v2.0_Chr5g0010591 Rosa chinensis HOM05D005057 ORTHO05D006570 2.5e-25 120.9 74 78.4
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 2.6e-22 110.9 171 42.1
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 5.8e-22 109.8 62 83.9
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 5.8e-22 109.8 86 65.1
Medtr2g015780 Medicago truncatula HOM05D005057 ORTHO05D006570 4.9e-13 80.1 57 66.7
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 1.9e-12 78.2 73 54.8
BolC8t49834H Brassica oleracea HOM05D005057 ORTHO05D019871 2.4e-07 61.2 132 34.1
CDE04G0254 Ceratophyllum demersum HOM05D001182 ORTHO05D008051 1.2e-06 58.9 54 51.9


User provided reference genes

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