Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 4.1e-57 224.6 118 100.0
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 3.5e-56 221.5 118 97.5
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 1.3e-23 113.2 115 57.4
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 3.9e-23 111.7 79 68.4
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 7.3e-22 107.5 115 55.7
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.8e-21 105.5 115 54.8
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 8.1e-21 104.0 116 52.6
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 1.1e-20 103.6 115 53.9
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.1e-20 103.6 115 53.9
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.1e-20 103.6 115 53.9
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 1.4e-20 103.2 115 52.2
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 2.4e-20 102.4 116 55.2
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 2.4e-20 102.4 115 53.0
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 5.3e-20 101.3 115 52.2
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 6.9e-20 100.9 106 52.8
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.5e-19 99.8 115 52.2
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.6e-19 99.0 115 52.2
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.6e-19 99.0 115 52.2
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 4.5e-19 98.2 99 55.6
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 7.6e-19 97.4 117 48.7
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 1.3e-18 96.7 66 68.2
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 1.3e-18 96.7 118 49.2
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 3.8e-18 95.1 103 51.5
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 6.4e-18 94.4 103 49.5
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 2.4e-17 92.4 106 50.0
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 3.2e-17 92.0 106 50.0
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 5.4e-17 91.3 65 61.5
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 5.4e-17 91.3 98 53.1
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 9.3e-17 90.5 115 49.6
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 9.3e-17 90.5 98 53.1
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 1.2e-16 90.1 98 53.1
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 2.1e-16 89.4 114 48.2
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 2.7e-16 89.0 96 54.2
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 2.7e-16 89.0 97 53.6
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 4.6e-16 88.2 102 52.0
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 6.0e-16 87.8 104 52.9
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 6.0e-16 87.8 72 59.7
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 7.9e-16 87.4 77 58.4
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 7.9e-16 87.4 115 45.2
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 7.9e-16 87.4 107 49.5
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 7.9e-16 87.4 89 55.1
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 1.0e-15 87.0 103 50.5
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 1.0e-15 87.0 94 55.3
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.3e-15 86.7 98 51.0
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 1.3e-15 86.7 107 49.5
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.8e-15 86.3 106 47.2
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 2.3e-15 85.9 57 71.9
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 2.3e-15 85.9 115 46.1
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 3.0e-15 85.5 89 53.9
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 5.1e-15 84.7 93 58.1
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 5.1e-15 84.7 102 45.1
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 5.1e-15 84.7 115 43.5
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 6.7e-15 84.3 101 50.5
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 6.7e-15 84.3 98 52.0
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 8.7e-15 84.0 111 45.9
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 8.7e-15 84.0 107 47.7
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 8.7e-15 84.0 102 47.1
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 1.5e-14 83.2 65 63.1
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.5e-14 83.2 106 46.2
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 1.9e-14 82.8 101 48.5
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 2.5e-14 82.4 106 45.3
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 2.5e-14 82.4 100 49.0
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 2.5e-14 82.4 114 43.0
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 3.3e-14 82.0 101 48.5
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 3.3e-14 82.0 106 44.3
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 4.3e-14 81.6 93 51.6
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 5.6e-14 81.3 94 51.1
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 7.4e-14 80.9 106 45.3
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 1.6e-13 79.7 91 53.8
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 2.1e-13 79.3 108 44.4
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 2.1e-13 79.3 104 46.2
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 4.8e-13 78.2 106 45.3
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 6.2e-13 77.8 106 41.5
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 8.1e-13 77.4 98 44.9
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 1.4e-12 76.6 55 60.0
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 2.4e-12 75.9 103 47.6
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 2.4e-12 75.9 115 42.6
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 4.0e-12 75.1 104 48.1
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 4.0e-12 75.1 104 48.1
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 5.3e-12 74.7 106 42.5
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 5.3e-12 74.7 106 42.5
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 5.3e-12 74.7 102 41.2
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 1.2e-11 73.6 95 51.6
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 2.6e-11 72.4 51 68.6
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 3.4e-11 72.0 104 43.3
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 3.4e-11 72.0 105 40.0
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 5.8e-11 71.2 99 44.4
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 5.8e-11 71.2 99 44.4
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 7.6e-11 70.9 98 40.8
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 9.9e-11 70.5 106 40.6
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 9.9e-11 70.5 176 36.9
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 1.7e-10 69.7 52 59.6
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 2.2e-10 69.3 51 66.7
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 3.8e-10 68.6 57 54.4
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 1.4e-09 66.6 94 47.9
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 1.9e-09 66.2 64 51.6
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 1.2e-08 63.5 94 44.7
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 2.1e-08 62.8 39 71.8
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 2.7e-08 62.4 44 61.4
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 8.7e-07 57.4 89 42.7
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 3.3e-06 55.5 45 53.3


User provided reference genes

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