Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4123 Papaver somniferum HOM05D002758 ORTHO05D002885 6.9e-58 227.3 128 100.0
PSO170G3914 Papaver somniferum HOM05D002758 ORTHO05D002885 2.6e-49 198.7 128 89.8
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 4.4e-12 75.1 137 38.7
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 4.4e-12 75.1 135 40.7
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 1.7e-11 73.2 137 37.2
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 2.4e-10 69.3 140 37.1
FvH4_6g29910 Fragaria vesca HOM05D002758 ORTHO05D002885 3.1e-10 68.9 129 39.5
FAN14G2484 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.1e-10 68.9 129 39.5
FAN02G3379 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.1e-10 68.6 129 39.5
Gohir.A05G016000 Gossypium hirsutum HOM05D002758 ORTHO05D002885 4.1e-10 68.6 142 42.3
Gohir.D05G017100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 4.1e-10 68.6 142 42.3
Gorai.009G017300 Gossypium raimondii HOM05D002758 ORTHO05D002885 4.1e-10 68.6 142 42.3
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 4.1e-10 68.6 134 38.1
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 5.4e-10 68.2 149 41.6
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 9.1e-10 67.4 137 36.5
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 2.0e-09 66.2 139 38.8
Oeu058050.1 Olea europaea HOM05D002758 ORTHO05D002885 2.7e-09 65.9 133 42.1
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 2.7e-09 65.9 149 37.6
FAN05G1526 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.5e-09 65.5 127 38.6
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 3.5e-09 65.5 134 38.8
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 3.5e-09 65.5 153 36.6
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 3.5e-09 65.5 138 35.5
Hund00526 Selenicereus undatus HOM05D002758 ORTHO05D002885 4.5e-09 65.1 141 36.2
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 7.7e-09 64.3 136 41.9
Gorai.001G042500 Gossypium raimondii HOM05D002758 ORTHO05D002885 1.3e-08 63.5 135 39.3
TWI32G0299 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 1.3e-08 63.5 131 38.9
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 1.7e-08 63.2 137 39.4
CiPaw.03G244800 Carya illinoinensis HOM05D002758 ORTHO05D002885 2.2e-08 62.8 150 38.0
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 2.9e-08 62.4 136 40.4
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 2.9e-08 62.4 158 34.8
RcHm_v2.0_Chr2g0135861 Rosa chinensis HOM05D002758 ORTHO05D002885 2.9e-08 62.4 130 37.7
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 3.8e-08 62.0 134 39.6
Dinv36518 Davidia involucrata HOM05D002758 ORTHO05D002885 3.8e-08 62.0 137 40.1
Duzib235G1225 Durio zibethinus HOM05D002758 ORTHO05D002885 3.8e-08 62.0 146 36.3
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 3.8e-08 62.0 156 35.3
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 3.8e-08 62.0 149 34.2
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 1.1e-07 60.5 142 35.9
Phvul.005G177400 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 1.5e-07 60.1 131 43.5
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.5e-07 60.1 148 33.1
CDE04G0331 Ceratophyllum demersum HOM05D002758 ORTHO05D002885 1.9e-07 59.7 128 35.9
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 1.9e-07 59.7 136 36.0
Gohir.A10G074300 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.9e-07 59.7 137 35.8
Gohir.D07G040200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.9e-07 59.7 135 39.3
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 2.5e-07 59.3 134 35.8
Glyma.08G211800 Glycine max HOM05D002758 ORTHO05D002885 2.5e-07 59.3 138 30.4
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 2.5e-07 59.3 134 38.1
MSTRG.11135 Avicennia marina HOM05D002758 ORTHO05D002885 3.2e-07 58.9 143 37.1
Duzib160G0702 Durio zibethinus HOM05D002758 ORTHO05D002885 3.2e-07 58.9 128 35.2
Duzib168G0478 Durio zibethinus HOM05D002758 ORTHO05D002885 3.2e-07 58.9 149 38.9
Gohir.A07G036200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 3.2e-07 58.9 136 36.8
Thecc.06G021700 Theobroma cacao HOM05D002758 ORTHO05D002885 3.2e-07 58.9 144 34.7
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 4.2e-07 58.5 134 35.1
Hund06567 Selenicereus undatus HOM05D002758 ORTHO05D002885 4.2e-07 58.5 142 34.5
VMungo1080G1568 Vigna mungo HOM05D002758 ORTHO05D002885 4.2e-07 58.5 129 36.4
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 5.5e-07 58.2 135 37.8
CANSAT11G2365 Cannabis sativa HOM05D002758 ORTHO05D002885 5.5e-07 58.2 152 33.6
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 5.5e-07 58.2 141 35.5
FAN26G2290 Fragaria x ananassa HOM05D002758 ORTHO05D002885 5.5e-07 58.2 145 34.5
FAN19G2709 Fragaria x ananassa HOM05D002758 ORTHO05D002885 7.2e-07 57.8 145 33.8
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 7.2e-07 57.8 119 36.1
Aqoxy7G02215 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 9.4e-07 57.4 134 32.8
VMungo1215G1272 Vigna mungo HOM05D002758 ORTHO05D002885 9.4e-07 57.4 133 33.8
FAN23G2585 Fragaria x ananassa HOM05D002758 ORTHO05D002885 1.2e-06 57.0 145 33.8
RcHm_v2.0_Chr2g0088291 Rosa chinensis HOM05D002758 ORTHO05D002885 1.2e-06 57.0 146 34.9
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.6e-06 56.6 134 36.6
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 1.6e-06 56.6 145 35.2
Phvul.003G165200 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 1.6e-06 56.6 134 34.3
Sed0025517 Sechium edule HOM05D002758 ORTHO05D002885 1.6e-06 56.6 134 38.8
Cc04_g04270 Coffea canephora HOM05D002758 ORTHO05D002885 2.1e-06 56.2 143 34.3
Migut.I00776 Erythranthe guttata HOM05D002758 ORTHO05D002885 2.1e-06 56.2 150 32.7
FvH4_1g03160 Fragaria vesca HOM05D002758 ORTHO05D002885 2.1e-06 56.2 144 34.7
Gohir.D10G077100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.1e-06 56.2 137 35.0
Gorai.011G083300 Gossypium raimondii HOM05D002758 ORTHO05D002885 2.7e-06 55.8 133 35.3
TWI63G1461 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 2.7e-06 55.8 128 39.8
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 2.7e-06 55.8 137 35.8
Atru.chr1.2990 Acer truncatum HOM05D002758 ORTHO05D002885 3.6e-06 55.5 129 34.1
Eucgr.C01181 Eucalyptus grandis HOM05D002758 ORTHO05D002885 3.6e-06 55.5 142 35.2
HanXRQChr12g0356261 Helianthus annuus HOM05D002758 ORTHO05D002885 3.6e-06 55.5 139 36.0
Manes.04G113800 Manihot esculenta HOM05D002758 ORTHO05D002885 3.6e-06 55.5 143 32.9
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 4.7e-06 55.1 130 37.7
ClCG06G011200 Citrullus lanatus HOM05D002758 ORTHO05D002885 4.7e-06 55.1 142 35.9
Medtr4g010530 Medicago truncatula HOM05D002758 ORTHO05D002885 4.7e-06 55.1 122 32.0
Potri.006G069100 Populus trichocarpa HOM05D002758 ORTHO05D002885 4.7e-06 55.1 147 32.7
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 6.1e-06 54.7 146 31.5
PSO210G3002 Papaver somniferum HOM05D002758 ORTHO05D002885 6.1e-06 54.7 127 35.4
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 8.0e-06 54.3 140 33.6


User provided reference genes

Program Settings