Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 1.9e-57 225.7 121 100.0
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 6.8e-23 110.9 78 79.5
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 1.7e-21 106.3 93 69.9
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 4.9e-21 104.8 93 66.7
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 4.1e-20 101.7 74 73.0
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 4.1e-20 101.7 95 63.2
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 5.4e-20 101.3 74 77.0
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 7.0e-20 100.9 93 65.6
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 2.0e-19 99.4 74 73.0
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 2.7e-19 99.0 92 67.4
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 4.6e-19 98.2 92 62.0
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 1.0e-18 97.1 92 64.1
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 1.0e-18 97.1 82 69.5
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 1.0e-18 97.1 82 69.5
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 3.0e-18 95.5 93 62.4
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 6.6e-18 94.4 78 69.2
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 6.6e-18 94.4 74 70.3
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 6.6e-18 94.4 93 59.1
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 6.6e-18 94.4 71 71.8
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 1.5e-17 93.2 74 73.0
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 3.3e-17 92.0 93 59.1
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 7.3e-17 90.9 92 62.0
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 7.3e-17 90.9 78 62.8
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 9.5e-17 90.5 78 65.4
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 9.5e-17 90.5 75 64.0
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 1.2e-16 90.1 73 65.8
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 1.2e-16 90.1 80 66.2
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 1.6e-16 89.7 91 60.4
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 1.6e-16 89.7 91 60.4
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 2.1e-16 89.4 94 58.5
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 2.1e-16 89.4 95 56.8
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 2.1e-16 89.4 93 58.1
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 2.1e-16 89.4 91 59.3
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 2.8e-16 89.0 94 57.4
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 2.8e-16 89.0 94 58.5
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 3.6e-16 88.6 75 65.3
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 3.6e-16 88.6 93 58.1
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 4.7e-16 88.2 96 58.3
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 1.4e-15 86.7 66 71.2
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 1.8e-15 86.3 93 58.1
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 2.3e-15 85.9 93 58.1
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 3.1e-15 85.5 88 53.4
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 3.1e-15 85.5 75 60.0
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 5.2e-15 84.7 88 53.4
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 5.2e-15 84.7 92 56.5
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 5.2e-15 84.7 88 53.4
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 8.9e-15 84.0 96 57.3
Sed0022915 Sechium edule HOM05D007649 ORTHO05D009668 8.9e-15 84.0 72 62.5
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 1.2e-14 83.6 72 69.4
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 1.2e-14 83.6 74 63.5
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 1.5e-14 83.2 77 61.0
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 2.0e-14 82.8 97 51.5
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 7.5e-14 80.9 64 68.8
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 7.5e-14 80.9 76 57.9
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 7.5e-14 80.9 74 62.2
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 9.8e-14 80.5 92 53.3
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 1.3e-13 80.1 73 64.4
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 1.7e-13 79.7 90 54.4
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 2.2e-13 79.3 78 57.7
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 2.2e-13 79.3 65 69.2
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 2.2e-13 79.3 68 66.2
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 2.2e-13 79.3 68 66.2
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 2.9e-13 79.0 71 62.0
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 2.9e-13 79.0 66 68.2
Sed0003009 Sechium edule HOM05D007649 ORTHO05D009668 3.7e-13 78.6 73 58.9
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 6.4e-13 77.8 73 63.0
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 6.4e-13 77.8 73 63.0
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 8.3e-13 77.4 76 59.2
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 1.9e-12 76.3 73 61.6
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 2.4e-12 75.9 73 58.9
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 2.4e-12 75.9 73 57.5
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 1.2e-11 73.6 100 48.0
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 1.6e-11 73.2 67 62.7
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 2.1e-11 72.8 80 51.2
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 2.1e-11 72.8 73 54.8
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 4.6e-11 71.6 72 54.2
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 4.6e-11 71.6 73 56.2
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 6.0e-11 71.2 87 49.4
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.3e-10 70.1 68 58.8
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 2.3e-10 69.3 56 66.1
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 8.6e-10 67.4 73 52.1
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 4.3e-09 65.1 53 69.8
Os05g0180700 Oryza sativa ssp. japonica HOM05D007649 ORTHO05D009668 9.5e-09 63.9 101 40.6
ATR0037G059 Amborella trichopoda HOM05D007649 ORTHO05D009668 1.2e-08 63.5 70 58.6
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 1.6e-08 63.2 48 68.8
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 2.1e-08 62.8 98 42.9
Gohir.A07G024600 Gossypium hirsutum HOM05D007649 ORTHO05D009668 2.1e-08 62.8 71 54.9
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 6.2e-08 61.2 58 58.6
Actinidia14648 Actinidia chinensis HOM05D007649 ORTHO05D009668 6.8e-07 57.8 48 60.4
FAN03G3370 Fragaria x ananassa HOM05D007649 ORTHO05D009668 5.8e-06 54.7 55 52.7


User provided reference genes

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