Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4024 Papaver somniferum HOM05D004749 ORTHO05D005995 5.8e-118 427.6 214 100.0
PSO210G5482 Papaver somniferum HOM05D004749 ORTHO05D005995 1.5e-68 263.5 247 62.3
PSO210G7457 Papaver somniferum HOM05D004749 ORTHO05D005995 1.5e-68 263.5 247 62.3
Sabra08G0077900 Salix brachista HOM05D004749 ORTHO05D005995 1.4e-66 256.9 247 59.5
Potri.008G103000 Populus trichocarpa HOM05D004749 ORTHO05D005995 5.2e-66 255.0 247 59.1
Potri.010G148000 Populus trichocarpa HOM05D004749 ORTHO05D005995 5.2e-66 255.0 247 58.3
TAR362G1144 Trochodendron aralioides HOM05D004749 ORTHO05D005995 6.7e-66 254.6 247 58.7
Cpa.g.sc106.97 Carica papaya HOM05D004749 ORTHO05D005995 8.8e-66 254.2 247 58.7
QL06p012791 Quercus lobata HOM05D004749 ORTHO05D005995 8.8e-66 254.2 247 60.3
MD12G1007400 Malus domestica HOM05D004749 ORTHO05D005995 1.5e-65 253.4 247 60.3
PGSC0003DMG400012333 Solanum tuberosum HOM05D004749 ORTHO05D005995 1.5e-65 253.4 247 57.9
Solyc08g081330.4 Solanum lycopersicum HOM05D004749 ORTHO05D005995 2.6e-65 252.7 247 57.9
Sopen08g029650 Solanum pennellii HOM05D004749 ORTHO05D005995 2.6e-65 252.7 247 57.9
QL04p048178 Quercus lobata HOM05D004749 ORTHO05D005995 3.3e-65 252.3 247 59.5
RcHm_v2.0_Chr4g0411531 Rosa chinensis HOM05D004749 ORTHO05D005995 7.5e-65 251.1 247 57.9
Migut.A01124 Erythranthe guttata HOM05D004749 ORTHO05D005995 1.7e-64 250.0 247 58.7
MD16G1150500 Malus domestica HOM05D004749 ORTHO05D005995 1.7e-64 250.0 247 59.1
SGA_v2.0_scaffold28G11759 Striga asiatica HOM05D004749 ORTHO05D005995 1.7e-64 250.0 241 59.3
CiPaw.01G136300 Carya illinoinensis HOM05D004749 ORTHO05D005995 2.8e-64 249.2 247 59.5
Sabra10G0114100 Salix brachista HOM05D004749 ORTHO05D005995 2.8e-64 249.2 247 56.3
CAN.G532.7 Capsicum annuum HOM05D004749 ORTHO05D005995 4.8e-64 248.4 247 57.1
CANSAT11G0071 Cannabis sativa HOM05D004749 ORTHO05D005995 6.3e-64 248.1 247 58.7
Hma1.2p1_1168F.1_g263150 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 8.2e-64 247.7 245 58.4
Hma1.2p1_4126F.1_g338340 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 8.2e-64 247.7 245 58.4
Prupe.1G114400 Prunus persica HOM05D004749 ORTHO05D005995 8.2e-64 247.7 247 58.7
TPR.G27004 Trifolium pratense HOM05D004749 ORTHO05D005995 8.2e-64 247.7 247 57.1
Medtr1g100240 Medicago truncatula HOM05D004749 ORTHO05D005995 1.1e-63 247.3 247 57.1
Thecc.04G246100 Theobroma cacao HOM05D004749 ORTHO05D005995 1.1e-63 247.3 247 58.7
VMungo0720G2504 Vigna mungo HOM05D004749 ORTHO05D005995 1.1e-63 247.3 247 57.5
Duzib052G0525 Durio zibethinus HOM05D004749 ORTHO05D005995 1.8e-63 246.5 247 58.7
BraA08t33522Z Brassica rapa HOM05D004749 ORTHO05D005995 2.4e-63 246.1 218 61.9
CiPaw.02G073100 Carya illinoinensis HOM05D004749 ORTHO05D005995 3.1e-63 245.7 247 58.7
Actinidia13350 Actinidia chinensis HOM05D004749 ORTHO05D005995 4.1e-63 245.4 247 57.1
Ca_10737_v3 Cicer arietinum L. HOM05D004749 ORTHO05D005995 4.1e-63 245.4 247 56.7
Cc02_g31810 Coffea canephora HOM05D004749 ORTHO05D005995 4.1e-63 245.4 247 57.1
Aqoxy1G00958 Aquilegia oxysepala HOM05D004749 ORTHO05D005995 7.0e-63 244.6 247 58.3
Gohir.D09G225200 Gossypium hirsutum HOM05D004749 ORTHO05D005995 7.0e-63 244.6 247 58.3
Gorai.006G246700 Gossypium raimondii HOM05D004749 ORTHO05D005995 7.0e-63 244.6 247 58.3
CSS0022958 Camellia sinensis var. sinensis HOM05D004749 ORTHO05D005995 9.1e-63 244.2 247 57.9
FvH4_4g12660 Fragaria vesca HOM05D004749 ORTHO05D005995 9.1e-63 244.2 247 56.7
FAN07G1280 Fragaria x ananassa HOM05D004749 ORTHO05D005995 9.1e-63 244.2 247 56.7
FAN12G1239 Fragaria x ananassa HOM05D004749 ORTHO05D005995 9.1e-63 244.2 247 56.7
FAN22G0862 Fragaria x ananassa HOM05D004749 ORTHO05D005995 9.1e-63 244.2 247 56.7
Atru.chr4.3050 Acer truncatum HOM05D004749 ORTHO05D005995 1.6e-62 243.4 247 57.5
Nitab4.5_0006920g0020 Nicotiana tabacum HOM05D004749 ORTHO05D005995 1.6e-62 243.4 247 55.9
Gohir.A09G223200 Gossypium hirsutum HOM05D004749 ORTHO05D005995 2.0e-62 243.0 247 57.9
Nn3g21759 Nelumbo nucifera HOM05D004749 ORTHO05D005995 2.0e-62 243.0 246 56.1
TWI73G0343 Tripterygium wilfordii HOM05D004749 ORTHO05D005995 2.7e-62 242.7 247 56.7
Nitab4.5_0001220g0090 Nicotiana tabacum HOM05D004749 ORTHO05D005995 3.5e-62 242.3 247 55.5
ClCG11G010380 Citrullus lanatus HOM05D004749 ORTHO05D005995 4.5e-62 241.9 247 57.1
Oeu061088.1 Olea europaea HOM05D004749 ORTHO05D005995 5.9e-62 241.5 247 57.5
Duzib151G0494 Durio zibethinus HOM05D004749 ORTHO05D005995 7.7e-62 241.1 247 55.9
MBI19_g03265_MAGBIO Magnolia biondii HOM05D004749 ORTHO05D005995 7.7e-62 241.1 247 56.3
TAR633G2406 Trochodendron aralioides HOM05D004749 ORTHO05D005995 7.7e-62 241.1 247 56.3
Sed0018873 Sechium edule HOM05D004749 ORTHO05D005995 1.0e-61 240.7 247 57.1
MELO3C008635.2 Cucumis melo HOM05D004749 ORTHO05D005995 1.3e-61 240.4 247 56.7
CsaV3_2G009980 Cucumis sativus L. HOM05D004749 ORTHO05D005995 1.3e-61 240.4 247 56.7
Psat6g193640 Pisum sativum HOM05D004749 ORTHO05D005995 1.3e-61 240.4 251 56.2
arahy.Tifrunner.gnm1.ann1.CI16ME Arachis hypogaea HOM05D004749 ORTHO05D005995 2.2e-61 239.6 247 55.1
arahy.Tifrunner.gnm1.ann1.YK8CX2 Arachis hypogaea HOM05D004749 ORTHO05D005995 2.2e-61 239.6 247 55.1
HanXRQChr10g0314441 Helianthus annuus HOM05D004749 ORTHO05D005995 2.2e-61 239.6 233 59.2
HanXRQChr17g0569351 Helianthus annuus HOM05D004749 ORTHO05D005995 2.2e-61 239.6 245 57.6
Lj4g0011402 Lotus japonicus HOM05D004749 ORTHO05D005995 3.8e-61 238.8 245 56.3
Carub.0007s1960 Capsella rubella HOM05D004749 ORTHO05D005995 5.0e-61 238.4 245 56.7
Manes.09G084300 Manihot esculenta HOM05D004749 ORTHO05D005995 8.5e-61 237.7 247 55.5
GSVIVG01034965001 Vitis vinifera HOM05D004749 ORTHO05D005995 1.9e-60 236.5 247 55.5
Cfa014134 Carpinus fangiana HOM05D004749 ORTHO05D005995 2.5e-60 236.1 245 54.7
Glyma.17G035700 Glycine max HOM05D004749 ORTHO05D005995 3.2e-60 235.7 247 55.9
Lsat_1_v5_gn_9_58140 Lactuca sativa HOM05D004749 ORTHO05D005995 4.2e-60 235.3 245 55.1
Lalb_Chr07g0181981 Lupinus albus HOM05D004749 ORTHO05D005995 5.5e-60 235.0 247 53.8
Sp7g19970 Schrenkiella parvula HOM05D004749 ORTHO05D005995 5.5e-60 235.0 245 55.9
THA.LOC104827101 Tarenaya hassleriana HOM05D004749 ORTHO05D005995 1.2e-59 233.8 246 56.1
MSTRG.12116 Avicennia marina HOM05D004749 ORTHO05D005995 2.7e-59 232.6 247 55.5
Nn4g25537 Nelumbo nucifera HOM05D004749 ORTHO05D005995 4.7e-59 231.9 247 53.8
Haze_01330 Corylus avellana HOM05D004749 ORTHO05D005995 6.1e-59 231.5 241 56.8
COL.COLO4_15791 Corchorus olitorius HOM05D004749 ORTHO05D005995 1.0e-58 230.7 247 55.9
Glyma.07G237800 Glycine max HOM05D004749 ORTHO05D005995 1.0e-58 230.7 247 55.1
SEGI_28650 Sequoiadendron giganteum HOM05D004749 ORTHO05D005995 1.0e-58 230.7 245 51.8
Cfa015286 Carpinus fangiana HOM05D003564 ORTHO05D005332 1.4e-58 230.3 240 56.7
ECA246G2874 Erigeron canadensis HOM05D004749 ORTHO05D005995 4.0e-58 228.8 245 54.3
FAN17G3131 Fragaria x ananassa HOM05D004749 ORTHO05D005995 4.0e-58 228.8 285 49.5
Actinidia14251 Actinidia chinensis HOM05D004749 ORTHO05D005995 5.2e-58 228.4 233 56.7
SalBow1G5780 Salvia bowleyana HOM05D004749 ORTHO05D005995 6.8e-58 228.0 232 56.9
Ciclev10005025m.g Citrus clementina HOM05D004749 ORTHO05D005995 8.8e-58 227.6 247 51.8
Zm00001eb395880 Zea mays HOM05D004749 ORTHO05D005995 8.8e-58 227.6 247 53.0
vmacro12071 Vaccinium macrocarpon HOM05D004749 ORTHO05D005995 1.5e-57 226.9 297 47.8
Peaxi162Scf00074g02033 Petunia axillaris HOM05D004749 ORTHO05D005995 3.4e-57 225.7 225 56.9
Phvul.003G116600 Phaseolus vulgaris HOM05D004749 ORTHO05D005995 3.4e-57 225.7 247 54.7
EL10Ac7g16373 Beta vulgaris HOM05D004749 ORTHO05D005995 5.7e-57 224.9 247 53.8
Thhalv10025484m.g Eutrema salsugineum HOM05D004749 ORTHO05D005995 4.8e-56 221.9 218 57.8
Rhsim10G0104300 Rhododendron simsii HOM05D004749 ORTHO05D005995 4.8e-56 221.9 227 56.4
BcaC09g51199 Brassica carinata HOM05D004749 ORTHO05D005995 6.3e-56 221.5 220 57.3
C01p15820 Brassica napus HOM05D004749 ORTHO05D005995 6.3e-56 221.5 220 57.3
BolC1t01536H Brassica oleracea HOM05D004749 ORTHO05D005995 6.3e-56 221.5 220 57.3
Dinv44265 Davidia involucrata HOM05D003564 ORTHO05D005332 6.3e-56 221.5 225 56.0
Hund18596 Selenicereus undatus HOM05D004749 ORTHO05D005995 6.3e-56 221.5 247 54.3
AL7G32130 Arabidopsis lyrata HOM05D004749 ORTHO05D005995 8.3e-56 221.1 245 53.5
AT4G21800 Arabidopsis thaliana HOM05D004749 ORTHO05D005995 8.3e-56 221.1 245 53.5
AUR62005917 Chenopodium quinoa HOM05D004749 ORTHO05D005995 8.3e-56 221.1 227 56.8
CDE02G1224 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 1.1e-55 220.7 247 51.8
DCAR_026992 Daucus carota HOM05D004749 ORTHO05D005995 1.1e-55 220.7 247 53.0
BcaNung02248 Brassica carinata HOM05D004749 ORTHO05D005995 1.8e-55 219.9 218 57.3
A01p13130 Brassica napus HOM05D004749 ORTHO05D005995 3.1e-55 219.2 220 56.4
BraA01t01257Z Brassica rapa HOM05D004749 ORTHO05D005995 3.1e-55 219.2 220 56.4
AUR62028146 Chenopodium quinoa HOM05D004749 ORTHO05D005995 5.4e-55 218.4 247 53.4
AUR62041770 Chenopodium quinoa HOM05D004749 ORTHO05D005995 1.2e-54 217.2 247 53.4
PGR031G3778 Punica granatum HOM05D004749 ORTHO05D005995 1.2e-54 217.2 249 53.4
Manes.08G074300 Manihot esculenta HOM05D004749 ORTHO05D005995 5.9e-54 214.9 247 52.2
Haze_22859 Corylus avellana HOM05D004749 ORTHO05D005995 7.7e-54 214.5 247 50.6
Sc17g0002650 Simmondsia chinensis HOM05D004749 ORTHO05D005995 1.0e-53 214.2 247 52.6
MD14G1004700 Malus domestica HOM05D004749 ORTHO05D005995 1.3e-53 213.8 247 54.3
CARHR228550 Cardamine hirsuta HOM05D004749 ORTHO05D005995 8.5e-53 211.1 245 51.8
Aa31LG6G3810 Aethionema arabicum HOM05D004749 ORTHO05D005995 1.5e-52 210.3 211 57.3
vmacro15173 Vaccinium macrocarpon HOM05D004749 ORTHO05D005995 1.9e-52 209.9 314 44.3
Eucgr.K01628 Eucalyptus grandis HOM05D004749 ORTHO05D005995 2.5e-52 209.5 247 52.6
SalBow7G1269 Salvia bowleyana HOM05D004749 ORTHO05D005995 3.2e-52 209.1 211 56.4
Dinv15143 Davidia involucrata HOM05D004749 ORTHO05D005995 5.2e-50 201.8 211 53.1
AagrBONN_evm.TU.Sc2ySwM_368.1659 Anthoceros agrestis HOM05D004749 ORTHO05D005995 1.3e-48 197.2 243 48.6
ATR0693G032 Amborella trichopoda HOM05D004749 ORTHO05D005995 2.2e-48 196.4 217 49.3
Pp3c8_16870 Physcomitrium patens HOM05D004749 ORTHO05D005995 1.8e-47 193.4 247 47.0
BcaC01g00741 Brassica carinata HOM05D004749 ORTHO05D005995 3.1e-47 192.6 229 53.7
SMO271G0158 Selaginella moellendorffii HOM05D004749 ORTHO05D005995 1.1e-44 184.1 240 47.1
arahy.Tifrunner.gnm1.ann1.08UNPH Arachis hypogaea HOM05D004749 ORTHO05D005995 4.3e-44 182.2 125 73.6
arahy.Tifrunner.gnm1.ann1.3R6CDR Arachis hypogaea HOM05D004749 ORTHO05D005995 4.3e-44 182.2 125 73.6
HPP92_008940 Vanilla planifolia HOM05D004749 ORTHO05D005995 4.3e-44 182.2 125 73.6
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 3.6e-43 179.1 125 71.2
CBR_g44475 Chara braunii HOM05D004749 ORTHO05D005995 4.7e-43 178.7 210 47.6
Mapoly0080s0030 Marchantia polymorpha HOM05D004749 ORTHO05D005995 6.1e-43 178.3 226 47.3
DCAR_030456 Daucus carota HOM05D004749 ORTHO05D005995 4.0e-42 175.6 247 43.3
Hma1.2p1_0078F.1_g039880 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 2.4e-39 166.4 197 52.3
Cre06.g267150 Chlamydomonas reinhardtii HOM05D004749 ORTHO05D005995 7.8e-38 161.4 250 41.2
MCO13G184 Micromonas commoda HOM05D004749 ORTHO05D005995 1.3e-37 160.6 244 41.4
Lju912A2T64 Lonicera japonica HOM05D004749 ORTHO05D005995 1.7e-37 160.2 234 45.3
C03p83720 Brassica napus HOM05D004749 ORTHO05D005995 6.6e-37 158.3 210 47.1
PRCOL_00000431 Prasinoderma coloniale HOM05D004749 ORTHO05D005995 3.3e-36 156.0 285 34.7
CSS0044945 Camellia sinensis var. sinensis HOM05D004749 ORTHO05D005995 1.2e-35 154.1 196 49.0
Lj6C561G5 Lonicera japonica HOM05D004749 ORTHO05D005995 8.9e-34 147.9 180 53.3
HanXRQChr08g0212681 Helianthus annuus HOM05D004749 ORTHO05D005995 1.2e-33 147.5 178 53.4
Hma1.2p1_1400F.1_g280890 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 4.4e-33 145.6 243 42.0
Cfa026321 Carpinus fangiana HOM05D004749 ORTHO05D005995 3.9e-29 132.5 286 31.5
Haze_27364 Corylus avellana HOM05D004749 ORTHO05D005995 7.3e-28 128.3 218 35.3
BolC3t20652H Brassica oleracea HOM05D004749 ORTHO05D005995 1.4e-26 124.0 204 43.1
unitig_578.g15956 Utricularia gibba HOM05D004749 ORTHO05D005995 3.4e-25 119.4 105 58.1
MD13G1150100 Malus domestica HOM05D004749 ORTHO05D005995 6.2e-19 98.6 201 35.8
HPP92_008928 Vanilla planifolia HOM05D004749 ORTHO05D005995 1.8e-18 97.1 166 40.4
Psat1g194120 Pisum sativum HOM05D002906 ORTHO05D003211 1.9e-15 87.0 154 39.6
A08p15460 Brassica napus HOM05D004749 ORTHO05D005995 3.9e-13 79.3 62 69.4
unitig_578.g15957 Utricularia gibba HOM05D004749 ORTHO05D005995 1.2e-09 67.8 66 57.6
Psat7g201920 Pisum sativum HOM05D000835 ORTHO05D004825 2.6e-09 66.6 57 59.6
Ah.13g071260 Amaranthus hybridus HOM05D004749 ORTHO05D005995 1.9e-07 60.5 45 62.2
SMO200G0002 Selaginella moellendorffii HOM05D002283 ORTHO05D005725 5.4e-07 58.9 68 39.7
C07p51410 Brassica napus HOM05D004749 ORTHO05D005995 1.2e-06 57.8 43 69.8
CDE08G0804 Ceratophyllum demersum HOM05D004749 ORTHO05D034260 1.2e-06 57.8 42 66.7
Mapoly0043s0065 Marchantia polymorpha HOM05D002283 ORTHO05D005725 2.1e-06 57.0 71 35.2
Mapoly0032s0094 Marchantia polymorpha HOM05D002283 ORTHO05D008228 4.6e-06 55.8 69 34.8
Pp3c19_7220 Physcomitrium patens HOM05D002283 ORTHO05D005725 4.6e-06 55.8 68 35.3
SEGI_09812 Sequoiadendron giganteum HOM05D002283 ORTHO05D005725 4.6e-06 55.8 68 38.2
EL10Ac6g13986 Beta vulgaris HOM05D002283 ORTHO05D005725 7.8e-06 55.1 68 38.2
CBR_g16045 Chara braunii HOM05D002283 ORTHO05D005725 7.8e-06 55.1 68 36.8
AUR62008457 Chenopodium quinoa HOM05D002283 ORTHO05D005725 7.8e-06 55.1 68 38.2


User provided reference genes

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